RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W HMX1P32339 317 aa3.54□□□□□ -1.84
HSH49YOR319W SSE1P32589 693 aaKnown RBP3.54□□□□□ -1.84
HSH49YOR319W COX13P32799 129 aa3.54□□□□□ -1.84
HSH49YOR319W EBP2P36049 427 aaKnown RBP3.54□□□□□ -1.84
HSH49YOR319W ATP3P38077 311 aaKnown RBP3.54□□□□□ -1.84
HSH49YOR319W YHR177WP38867 453 aa3.54□□□□□ -1.84
HSH49YOR319W MST28P39552 234 aa3.54□□□□□ -1.84
HSH49YOR319W SAD1P43589 448 aa3.54□□□□□ -1.84
HSH49YOR319W RRT5P43607 289 aa3.54□□□□□ -1.84
HSH49YOR319W AVT4P50944 713 aa3.54□□□□□ -1.84
HSH49YOR319W DIG1Q03063 452 aaKnown RBP3.54□□□□□ -1.84
HSH49YOR319W ECM7Q06200 448 aa3.54□□□□□ -1.84
HSH49YOR319W CBP2P03874 630 aaPredicted RBP3.53□□□□□ -1.84
HSH49YOR319W RNR2P09938 399 aaKnown RBP3.53□□□□□ -1.84
HSH49YOR319W ATR1P13090 542 aa3.53□□□□□ -1.84
HSH49YOR319W DBP3P20447 523 aaKnown RBP3.53□□□□□ -1.84
HSH49YOR319W PET18P25362 215 aa3.53□□□□□ -1.84
HSH49YOR319W SKT5P34226 696 aa3.53□□□□□ -1.84
HSH49YOR319W KKQ8P36004 724 aa3.53□□□□□ -1.84
HSH49YOR319W DOA1P36037 715 aa3.53□□□□□ -1.84
HSH49YOR319W MRPL40P36534 297 aa3.53□□□□□ -1.84
HSH49YOR319W BZZ1P38822 633 aa3.53□□□□□ -1.84
HSH49YOR319W YHR122WP38829 231 aa3.53□□□□□ -1.84
HSH49YOR319W RTT105P40063 208 aa3.53□□□□□ -1.84
HSH49YOR319W SPG5P42933 373 aa3.53□□□□□ -1.84
HSH49YOR319W RTT101P47050 842 aa3.53□□□□□ -1.84
HSH49YOR319W STE24P47154 453 aa3.53□□□□□ -1.84
HSH49YOR319W MSC3Q05812 728 aa3.53□□□□□ -1.84
HSH49YOR319W YPR078CQ06813 372 aa3.53□□□□□ -1.84
HSH49YOR319W YPL199CQ08954 240 aa3.53□□□□□ -1.84
HSH49YOR319W TPT1Q12272 230 aaKnown RBP3.53□□□□□ -1.84
HSH49YOR319W ATP1P07251 545 aaKnown RBP3.52□□□□□ -1.85
HSH49YOR319W RNA1P11745 407 aaKnown RBP3.52□□□□□ -1.85
HSH49YOR319W GRR1P24814 1151 aa3.52□□□□□ -1.85
HSH49YOR319W PUT3P25502 979 aaPredicted RBP3.52□□□□□ -1.85
HSH49YOR319W YCR022CP25620 114 aa3.52□□□□□ -1.85
HSH49YOR319W MSK1P32048 576 aa3.52□□□□□ -1.85
HSH49YOR319W PTK1P36002 662 aaPredicted RBP3.52□□□□□ -1.85
HSH49YOR319W TIF5P38431 405 aaKnown RBP3.52□□□□□ -1.85
HSH49YOR319W DHH1P39517 506 aaKnown RBP3.52□□□□□ -1.85
HSH49YOR319W ATM1P40416 690 aa3.52□□□□□ -1.85
HSH49YOR319W SNL1P40548 159 aa3.52□□□□□ -1.85
HSH49YOR319W RET3P53600 189 aa3.52□□□□□ -1.85
HSH49YOR319W CAF40P53829 373 aa3.52□□□□□ -1.85
HSH49YOR319W PIR3Q03180 325 aa3.52□□□□□ -1.85
HSH49YOR319W YMR181CQ03231 154 aa3.52□□□□□ -1.85
HSH49YOR319W ERP1Q05359 219 aaKnown RBP3.52□□□□□ -1.85
HSH49YOR319W LDS2Q08218 356 aa3.52□□□□□ -1.85
HSH49YOR319W YIL002W-AQ3E7Z5 69 aa3.52□□□□□ -1.85
HSH49YOR319W TPK3P05986 398 aa3.51□□□□□ -1.85
HSH49YOR319W RPL20AP0CX23 172 aaKnown RBP3.51□□□□□ -1.85
HSH49YOR319W RPL20BP0CX24 172 aaPredicted RBP3.51□□□□□ -1.85
HSH49YOR319W GAL3P13045 520 aa3.51□□□□□ -1.85
HSH49YOR319W SAM2P19358 384 aaKnown RBP3.51□□□□□ -1.85
HSH49YOR319W ITR1P30605 584 aa3.51□□□□□ -1.85
HSH49YOR319W EFB1P32471 206 aaKnown RBP3.51□□□□□ -1.85
HSH49YOR319W LOS1P33418 1100 aaPredicted RBP3.51□□□□□ -1.85
HSH49YOR319W PMU1P36069 295 aa3.51□□□□□ -1.85
HSH49YOR319W YND1P40009 630 aa3.51□□□□□ -1.85
HSH49YOR319W LCP5P40079 357 aaPredicted RBP3.51□□□□□ -1.85
HSH49YOR319W SIM1P40472 476 aa3.51□□□□□ -1.85
HSH49YOR319W TOS3P43637 560 aa3.51□□□□□ -1.85
HSH49YOR319W SFH5P47008 294 aa3.51□□□□□ -1.85
HSH49YOR319W YNL146WP53906 100 aa3.51□□□□□ -1.85
HSH49YOR319W ABZ2Q03266 374 aa3.51□□□□□ -1.85
HSH49YOR319W YLR297WQ05899 129 aa3.51□□□□□ -1.85
HSH49YOR319W ASA1Q06822 443 aa3.51□□□□□ -1.85
HSH49YOR319W YOR012WQ12351 137 aa3.51□□□□□ -1.85
HSH49YOR319W NCA2Q12374 616 aa3.51□□□□□ -1.85
HSH49YOR319W RRP12Q12754 1228 aaKnown RBP3.51□□□□□ -1.85
HSH49YOR319W VPS63O13549 108 aa3.5□□□□□ -1.85
HSH49YOR319W PAB1P04147 577 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
HSH49YOR319W HEM2P05373 342 aa3.5□□□□□ -1.85
HSH49YOR319W MRS3P10566 314 aa3.5□□□□□ -1.85
HSH49YOR319W PUT4P15380 627 aa3.5□□□□□ -1.85
HSH49YOR319W HXT2P23585 541 aa3.5□□□□□ -1.85
HSH49YOR319W DBR1P24309 405 aaKnown RBP3.5□□□□□ -1.85
HSH49YOR319W RIB7P33312 244 aa3.5□□□□□ -1.85
HSH49YOR319W YKL097CP34245 136 aa3.5□□□□□ -1.85
HSH49YOR319W YBR139WP38109 508 aa3.5□□□□□ -1.85
HSH49YOR319W MTC4P38335 694 aaKnown RBP3.5□□□□□ -1.85
HSH49YOR319W MNN9P39107 395 aaKnown RBP3.5□□□□□ -1.85
HSH49YOR319W FAA2P39518 744 aa3.5□□□□□ -1.85
HSH49YOR319W LYS12P40495 371 aaKnown RBP3.5□□□□□ -1.85
HSH49YOR319W LOC1P43586 204 aaPredicted RBP3.5□□□□□ -1.85
HSH49YOR319W YFR018CP43599 363 aa3.5□□□□□ -1.85
HSH49YOR319W TOS2P50078 622 aa3.5□□□□□ -1.85
HSH49YOR319W AZR1P50080 613 aa3.5□□□□□ -1.85
HSH49YOR319W YGL260WP53056 76 aa3.5□□□□□ -1.85
HSH49YOR319W YGL114WP53134 725 aa3.5□□□□□ -1.85
HSH49YOR319W YGR117CP53270 476 aa3.5□□□□□ -1.85
HSH49YOR319W IBD2P53892 351 aa3.5□□□□□ -1.85
HSH49YOR319W EGD1Q02642 157 aaKnown RBP3.5□□□□□ -1.85
HSH49YOR319W PFK27Q12471 397 aaPredicted RBP3.5□□□□□ -1.85
HSH49YOR319W RRP36Q12481 300 aaPredicted RBP3.5□□□□□ -1.85
HSH49YOR319W RPL15AP05748 204 aaKnown RBP3.49□□□□□ -1.85
HSH49YOR319W MAS2P11914 482 aa3.49□□□□□ -1.85
HSH49YOR319W CLN3P13365 580 aa3.49□□□□□ -1.85
HSH49YOR319W NOP1P15646 327 aaKnown RBP3.49□□□□□ -1.85
HSH49YOR319W CDC23P16522 626 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms