RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W TY2A-DR3Q99303 438 aa1.82□□□□□ -2.12
HSH155YMR288W CDC24P11433 854 aaPredicted RBP1.81□□□□□ -2.12
HSH155YMR288W CLN3P13365 580 aa1.81□□□□□ -2.12
HSH155YMR288W PEP3P27801 918 aa1.81□□□□□ -2.12
HSH155YMR288W ERV1P27882 189 aa1.81□□□□□ -2.12
HSH155YMR288W MEI5P32489 222 aa1.81□□□□□ -2.12
HSH155YMR288W CBF5P33322 483 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
HSH155YMR288W SEF1P34228 1148 aa1.81□□□□□ -2.12
HSH155YMR288W YBR139WP38109 508 aa1.81□□□□□ -2.12
HSH155YMR288W SIP3P38717 1229 aa1.81□□□□□ -2.12
HSH155YMR288W MLH1P38920 769 aa1.81□□□□□ -2.12
HSH155YMR288W SLZ1P40167 298 aa1.81□□□□□ -2.12
HSH155YMR288W PCI8P40512 444 aa1.81□□□□□ -2.12
HSH155YMR288W RSN1Q03516 953 aa1.81□□□□□ -2.12
HSH155YMR288W VHS1Q03785 461 aa1.81□□□□□ -2.12
HSH155YMR288W CSM3Q04659 317 aa1.81□□□□□ -2.12
HSH155YMR288W SSQ1Q05931 657 aaPredicted RBP1.81□□□□□ -2.12
HSH155YMR288W VAM6Q07468 1049 aa1.81□□□□□ -2.12
HSH155YMR288W TLG2Q08144 397 aa1.81□□□□□ -2.12
HSH155YMR288W RCN2Q12044 265 aa1.81□□□□□ -2.12
HSH155YMR288W TIP41Q12199 356 aa1.81□□□□□ -2.12
HSH155YMR288W RGT2Q12300 763 aa1.81□□□□□ -2.12
HSH155YMR288W CBP2P03874 630 aaPredicted RBP1.81□□□□□ -2.12
HSH155YMR288W YMR085WP0CF18 432 aa1.81□□□□□ -2.12
HSH155YMR288W RAP1P11938 827 aa1.81□□□□□ -2.12
HSH155YMR288W TAL1P15019 335 aaKnown RBP1.81□□□□□ -2.12
HSH155YMR288W CLB3P24870 427 aa1.81□□□□□ -2.12
HSH155YMR288W BUD14P27637 709 aa1.81□□□□□ -2.12
HSH155YMR288W FAA1P30624 700 aaKnown RBP1.81□□□□□ -2.12
HSH155YMR288W SEC66P33754 206 aa1.81□□□□□ -2.12
HSH155YMR288W ATP3P38077 311 aaKnown RBP1.81□□□□□ -2.12
HSH155YMR288W VID24P38263 362 aa1.81□□□□□ -2.12
HSH155YMR288W IMD2P38697 523 aaKnown RBP1.81□□□□□ -2.12
HSH155YMR288W ARN1P38731 627 aa1.81□□□□□ -2.12
HSH155YMR288W YHB1P39676 399 aaKnown RBP1.81□□□□□ -2.12
HSH155YMR288W CFD1P40558 293 aa1.81□□□□□ -2.12
HSH155YMR288W SSU1P41930 458 aa1.81□□□□□ -2.12
HSH155YMR288W CAK1P43568 368 aaPredicted RBP1.81□□□□□ -2.12
HSH155YMR288W LIA1P47120 325 aaKnown RBP1.81□□□□□ -2.12
HSH155YMR288W AAD10P47182 288 aa1.81□□□□□ -2.12
HSH155YMR288W IMD3P50095 523 aaKnown RBP1.81□□□□□ -2.12
HSH155YMR288W YGR067CP53243 804 aa1.81□□□□□ -2.12
HSH155YMR288W INN1P53901 409 aa1.81□□□□□ -2.12
HSH155YMR288W YNL143CP53908 130 aa1.81□□□□□ -2.12
HSH155YMR288W EAF7P53911 425 aaKnown RBP1.81□□□□□ -2.12
HSH155YMR288W SWF1Q04629 336 aa1.81□□□□□ -2.12
HSH155YMR288W RQC1Q05468 723 aaKnown RBP1.81□□□□□ -2.12
HSH155YMR288W YOR097CQ12274 175 aaPredicted RBP1.81□□□□□ -2.12
HSH155YMR288W FRE7Q12333 620 aa1.81□□□□□ -2.12
HSH155YMR288W SKM1Q12469 655 aa1.81□□□□□ -2.12
HSH155YMR288W YBR126W-AQ8TGU7 68 aa1.81□□□□□ -2.12
HSH155YMR288W VCX1Q99385 411 aa1.81□□□□□ -2.12
HSH155YMR288W YPR089WO13585 888 aa1.8□□□□□ -2.12
HSH155YMR288W HIS4P00815 799 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W KSS1P14681 368 aa1.8□□□□□ -2.12
HSH155YMR288W ERG1P32476 496 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W PXL1P36166 706 aa1.8□□□□□ -2.12
HSH155YMR288W ADE17P38009 592 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W SMF2P38778 549 aa1.8□□□□□ -2.12
HSH155YMR288W MNN9P39107 395 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W FHL1P39521 936 aa1.8□□□□□ -2.12
HSH155YMR288W SSO2P39926 295 aa1.8□□□□□ -2.12
HSH155YMR288W PHM8P40025 321 aa1.8□□□□□ -2.12
HSH155YMR288W SHQ1P40486 507 aaPredicted RBP1.8□□□□□ -2.12
HSH155YMR288W SMC3P47037 1230 aa1.8□□□□□ -2.12
HSH155YMR288W HAM1P47119 197 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W ECM27P47144 725 aa1.8□□□□□ -2.12
HSH155YMR288W MSY1P48527 492 aa1.8□□□□□ -2.12
HSH155YMR288W LCL3P53153 274 aa1.8□□□□□ -2.12
HSH155YMR288W RTT102P53330 157 aa1.8□□□□□ -2.12
HSH155YMR288W IST1P53843 298 aaPredicted RBP1.8□□□□□ -2.12
HSH155YMR288W YNL234WP53857 426 aa1.8□□□□□ -2.12
HSH155YMR288W PGA2P53903 129 aa1.8□□□□□ -2.12
HSH155YMR288W BOP3P53958 396 aa1.8□□□□□ -2.12
HSH155YMR288W YMR102CQ03177 834 aa1.8□□□□□ -2.12
HSH155YMR288W RAD30Q04049 632 aa1.8□□□□□ -2.12
HSH155YMR288W AIM33Q04516 312 aa1.8□□□□□ -2.12
HSH155YMR288W RTN1Q04947 295 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W BCP1Q06338 283 aa1.8□□□□□ -2.12
HSH155YMR288W YLR413WQ06689 675 aa1.8□□□□□ -2.12
HSH155YMR288W PFA4Q12006 378 aa1.8□□□□□ -2.12
HSH155YMR288W ICT1Q12385 394 aa1.8□□□□□ -2.12
HSH155YMR288W YOR111WQ99210 232 aa1.8□□□□□ -2.12
HSH155YMR288W AFI1Q99222 893 aa1.8□□□□□ -2.12
HSH155YMR288W CDC39P25655 2108 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W YBR085C-AO43137 85 aa1.8□□□□□ -2.12
HSH155YMR288W COX3P00420 269 aa1.8□□□□□ -2.12
HSH155YMR288W RPL22AP05749 121 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W GAL7P08431 366 aa1.8□□□□□ -2.12
HSH155YMR288W GCD2P12754 651 aaPredicted RBP1.8□□□□□ -2.12
HSH155YMR288W PAP1P29468 568 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W RRT2P38332 387 aa1.8□□□□□ -2.12
HSH155YMR288W TAE1P38340 232 aa1.8□□□□□ -2.12
HSH155YMR288W PET100P38958 111 aa1.8□□□□□ -2.12
HSH155YMR288W ALG5P40350 334 aa1.8□□□□□ -2.12
HSH155YMR288W YRB2P40517 327 aa1.8□□□□□ -2.12
HSH155YMR288W OTU1P43558 301 aa1.8□□□□□ -2.12
HSH155YMR288W MDV1P47025 714 aa1.8□□□□□ -2.12
HSH155YMR288W YPT11P48559 417 aa1.8□□□□□ -2.12
HSH155YMR288W YNL146WP53906 100 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms