RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W MPM1P40364 252 aa14.5□□□□□ -0.09
CCC1YLR220W JHD2P47156 728 aaPredicted RBP14.5□□□□□ -0.09
CCC1YLR220W SKS1Q12505 502 aa14.5□□□□□ -0.09
CCC1YLR220W IRA1P18963 3092 aa14.5□□□□□ -0.09
CCC1YLR220W TRR2P38816 342 aa14.49□□□□□ -0.09
CCC1YLR220W TPA1P40032 644 aaKnown RBP14.49□□□□□ -0.09
CCC1YLR220W YPR172WQ06608 200 aa14.49□□□□□ -0.09
CCC1YLR220W NBA1Q08229 501 aaKnown RBP14.49□□□□□ -0.09
CCC1YLR220W AI4P03878 556 aa14.48□□□□□ -0.09
CCC1YLR220W STE6P12866 1290 aa14.48□□□□□ -0.09
CCC1YLR220W URA4P20051 364 aa14.48□□□□□ -0.09
CCC1YLR220W YIM1P28625 365 aa14.48□□□□□ -0.09
CCC1YLR220W YER158CP40095 573 aa14.48□□□□□ -0.09
CCC1YLR220W ROM1P53046 1155 aa14.48□□□□□ -0.09
CCC1YLR220W SMA2Q04658 369 aa14.48□□□□□ -0.09
CCC1YLR220W VID22Q05934 901 aa14.48□□□□□ -0.09
CCC1YLR220W YPR174CQ06616 221 aaPredicted RBP14.48□□□□□ -0.09
CCC1YLR220W YPR091CQ06833 770 aa14.48□□□□□ -0.09
CCC1YLR220W MCA1Q08601 432 aa14.48□□□□□ -0.09
CCC1YLR220W GLE1Q12315 538 aa14.48□□□□□ -0.09
CCC1YLR220W PSY3Q12318 242 aa14.48□□□□□ -0.09
CCC1YLR220W YOL159C-AQ3E769 90 aa14.48□□□□□ -0.09
CCC1YLR220W RPS12P48589 143 aaKnown RBP14.47□□□□□ -0.09
CCC1YLR220W GPI8P49018 411 aa14.47□□□□□ -0.09
CCC1YLR220W RNH70P53331 553 aa14.47□□□□□ -0.09
CCC1YLR220W STP22P25604 385 aa14.46□□□□□ -0.09
CCC1YLR220W ZTA1P38230 334 aaKnown RBP14.46□□□□□ -0.09
CCC1YLR220W ECM1P39715 212 aa14.46□□□□□ -0.09
CCC1YLR220W UTP25P40498 721 aaKnown RBP14.46□□□□□ -0.09
CCC1YLR220W YGR201CP42936 225 aa14.46□□□□□ -0.09
CCC1YLR220W RMR1P53060 241 aa14.46□□□□□ -0.09
CCC1YLR220W ELP4Q02884 456 aaKnown RBP14.46□□□□□ -0.09
CCC1YLR220W RAD30Q04049 632 aa14.46□□□□□ -0.09
CCC1YLR220W YOR365CQ08844 703 aa14.46□□□□□ -0.09
CCC1YLR220W FRE7Q12333 620 aa14.46□□□□□ -0.09
CCC1YLR220W PMT2P31382 759 aa14.45□□□□□ -0.1
CCC1YLR220W APE2P32454 952 aaKnown RBP14.45□□□□□ -0.1
CCC1YLR220W DCG1P32460 244 aa14.45□□□□□ -0.1
CCC1YLR220W LST4P34239 828 aa14.45□□□□□ -0.1
CCC1YLR220W TUL1P36096 758 aa14.45□□□□□ -0.1
CCC1YLR220W AAD10P47182 288 aa14.45□□□□□ -0.1
CCC1YLR220W LCL3P53153 274 aa14.45□□□□□ -0.1
CCC1YLR220W RRN5Q02983 363 aa14.45□□□□□ -0.1
CCC1YLR220W YMR210WQ03649 449 aa14.45□□□□□ -0.1
CCC1YLR220W YDR239CQ03780 787 aa14.45□□□□□ -0.1
CCC1YLR220W DBP9Q06218 594 aaKnown RBP14.45□□□□□ -0.1
CCC1YLR220W MEU1Q07938 337 aaKnown RBP RIP-Chip data14.45□□□□□ -0.1not detected
CCC1YLR220W SFM1Q12314 213 aa14.45□□□□□ -0.1
CCC1YLR220W COX1P00401 534 aa14.44□□□□□ -0.1
CCC1YLR220W MF(ALPHA)1P01149 165 aa14.44□□□□□ -0.1
CCC1YLR220W CTR86P25355 563 aa14.44□□□□□ -0.1
CCC1YLR220W NTG1P31378 399 aa14.44□□□□□ -0.1
CCC1YLR220W SWD1P39706 426 aa14.44□□□□□ -0.1
CCC1YLR220W VPS52P39904 641 aa14.44□□□□□ -0.1
CCC1YLR220W ASI2P53895 289 aa14.44□□□□□ -0.1
CCC1YLR220W SKI8Q02793 397 aaPredicted RBP14.44□□□□□ -0.1
CCC1YLR220W NDL1Q06568 189 aa14.44□□□□□ -0.1
CCC1YLR220W TAF3Q12297 353 aa14.44□□□□□ -0.1
CCC1YLR220W RPL17AP05740 184 aaKnown RBP14.43□□□□□ -0.1
CCC1YLR220W SNF4P12904 322 aa14.43□□□□□ -0.1
CCC1YLR220W CBS1P14066 229 aa14.43□□□□□ -0.1
CCC1YLR220W CDC26P14724 124 aa14.43□□□□□ -0.1
CCC1YLR220W THR1P17423 357 aaKnown RBP14.43□□□□□ -0.1
CCC1YLR220W DBP3P20447 523 aaKnown RBP14.43□□□□□ -0.1
CCC1YLR220W CLB4P24871 460 aa14.43□□□□□ -0.1
CCC1YLR220W LOT5P34234 306 aa14.43□□□□□ -0.1
CCC1YLR220W SPC42P36094 363 aa14.43□□□□□ -0.1
CCC1YLR220W BET3P36149 193 aa14.43□□□□□ -0.1
CCC1YLR220W RPL17BP46990 184 aaKnown RBP14.43□□□□□ -0.1
CCC1YLR220W ALB1P47019 175 aaPredicted RBP14.43□□□□□ -0.1
CCC1YLR220W RSC9Q03124 581 aa14.43□□□□□ -0.1
CCC1YLR220W RIM13Q03792 727 aa14.43□□□□□ -0.1
CCC1YLR220W YOR342CQ12182 319 aa14.43□□□□□ -0.1
CCC1YLR220W MRK1P50873 501 aa14.42□□□□□ -0.1
CCC1YLR220W ARO10Q06408 635 aa14.42□□□□□ -0.1
CCC1YLR220W DCI1Q08558 271 aa14.42□□□□□ -0.1
CCC1YLR220W REX3Q12090 404 aa14.42□□□□□ -0.1
CCC1YLR220W MCK1P21965 375 aaKnown RBP14.41□□□□□ -0.1
CCC1YLR220W TEF4P36008 412 aaKnown RBP14.41□□□□□ -0.1
CCC1YLR220W FES1P38260 290 aa14.41□□□□□ -0.1
CCC1YLR220W MED8P38304 223 aa14.41□□□□□ -0.1
CCC1YLR220W PZF1P39933 429 aa14.41□□□□□ -0.1
CCC1YLR220W PMT3P47190 753 aa14.41□□□□□ -0.1
CCC1YLR220W PEX25Q02969 394 aa14.41□□□□□ -0.1
CCC1YLR220W HSP42Q12329 375 aa14.41□□□□□ -0.1
CCC1YLR220W TSC13Q99190 310 aa14.41□□□□□ -0.1
CCC1YLR220W SEC2P17065 759 aa14.4□□□□□ -0.1
CCC1YLR220W GLK1P17709 500 aaKnown RBP14.4□□□□□ -0.1
CCC1YLR220W YOR062CP36025 268 aa14.4□□□□□ -0.1
CCC1YLR220W SPC34P36131 295 aa14.4□□□□□ -0.1
CCC1YLR220W BIG1P38813 335 aa14.4□□□□□ -0.1
CCC1YLR220W MBP1P39678 833 aa14.4□□□□□ -0.1
CCC1YLR220W SNL1P40548 159 aa14.4□□□□□ -0.1
CCC1YLR220W SNM1P40993 198 aa14.4□□□□□ -0.1
CCC1YLR220W SPT20P50875 604 aa14.4□□□□□ -0.1
CCC1YLR220W TPC1P53257 314 aa14.4□□□□□ -0.1
CCC1YLR220W GPH1P06738 902 aaKnown RBP14.39□□□□□ -0.11
CCC1YLR220W GRR1P24814 1151 aa14.39□□□□□ -0.11
CCC1YLR220W HCS1P34243 683 aa14.39□□□□□ -0.11
CCC1YLR220W IFA38P38286 347 aa14.39□□□□□ -0.11
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms