RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C GOR1P53839 350 aa5.55□□□□□ -1.52
SSK1YLR006C HRD3Q05787 833 aa5.55□□□□□ -1.52
SSK1YLR006C PIB1Q06651 286 aa5.55□□□□□ -1.52
SSK1YLR006C YLR040CQ07988 224 aa5.55□□□□□ -1.52
SSK1YLR006C SAM3Q08986 587 aa5.55□□□□□ -1.52
SSK1YLR006C ATG34Q12292 412 aa5.55□□□□□ -1.52
SSK1YLR006C TFB5Q3E7C1 72 aaPredicted RBP5.55□□□□□ -1.52
SSK1YLR006C THP2O13539 261 aaKnown RBP5.54□□□□□ -1.52
SSK1YLR006C UGA1P17649 471 aa5.54□□□□□ -1.52
SSK1YLR006C CTR86P25355 563 aa5.54□□□□□ -1.52
SSK1YLR006C BUB2P26448 306 aaPredicted RBP5.54□□□□□ -1.52
SSK1YLR006C UBC8P28263 218 aa5.54□□□□□ -1.52
SSK1YLR006C CYS4P32582 507 aaKnown RBP5.54□□□□□ -1.52
SSK1YLR006C HMT1P38074 348 aa5.54□□□□□ -1.52
SSK1YLR006C IST2P38250 946 aa5.54□□□□□ -1.52
SSK1YLR006C COA1P40452 197 aa5.54□□□□□ -1.52
SSK1YLR006C QDR2P40474 542 aa5.54□□□□□ -1.52
SSK1YLR006C GAB1P41733 394 aa5.54□□□□□ -1.52
SSK1YLR006C SWP82P43554 623 aa5.54□□□□□ -1.52
SSK1YLR006C LSM1P47017 172 aaKnown RBP5.54□□□□□ -1.52
SSK1YLR006C IBA57P47158 497 aa5.54□□□□□ -1.52
SSK1YLR006C SCY1P53009 804 aa5.54□□□□□ -1.52
SSK1YLR006C IMA1P53051 589 aa5.54□□□□□ -1.52
SSK1YLR006C GND2P53319 492 aa5.54□□□□□ -1.52
SSK1YLR006C IPI3P53877 555 aa5.54□□□□□ -1.52
SSK1YLR006C YNL095CP53932 642 aa5.54□□□□□ -1.52
SSK1YLR006C YMR265CQ03508 461 aaKnown RBP5.54□□□□□ -1.52
SSK1YLR006C RIM13Q03792 727 aa5.54□□□□□ -1.52
SSK1YLR006C RPC11Q04307 110 aaPredicted RBP5.54□□□□□ -1.52
SSK1YLR006C RIF2Q06208 395 aa5.54□□□□□ -1.52
SSK1YLR006C SWC7Q06707 132 aa5.54□□□□□ -1.52
SSK1YLR006C YOR022CQ12204 715 aa5.54□□□□□ -1.52
SSK1YLR006C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52 RIP-Chip
SSK1YLR006C NDJ1Q12366 352 aa5.54□□□□□ -1.52
SSK1YLR006C SUC2P00724 532 aa5.54□□□□□ -1.52
SSK1YLR006C PTM1P32857 523 aa5.54□□□□□ -1.52
SSK1YLR006C CSE2P33308 149 aa5.54□□□□□ -1.52
SSK1YLR006C SPC34P36131 295 aa5.54□□□□□ -1.52
SSK1YLR006C DRE2P36152 348 aa5.54□□□□□ -1.52
SSK1YLR006C CDS1P38221 457 aa5.54□□□□□ -1.52
SSK1YLR006C FHL1P39521 936 aa5.54□□□□□ -1.52
SSK1YLR006C SEO1P39709 593 aa5.54□□□□□ -1.52
SSK1YLR006C AVT6P40074 448 aa5.54□□□□□ -1.52
SSK1YLR006C SGN1P40561 250 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
SSK1YLR006C OYE3P41816 400 aaPredicted RBP5.54□□□□□ -1.52
SSK1YLR006C GTR2P53290 341 aa5.54□□□□□ -1.52
SSK1YLR006C RRN9P53437 365 aa5.54□□□□□ -1.52
SSK1YLR006C IBD2P53892 351 aa5.54□□□□□ -1.52
SSK1YLR006C STP1Q00947 519 aa5.54□□□□□ -1.52
SSK1YLR006C SED5Q01590 340 aa5.54□□□□□ -1.52
SSK1YLR006C YPL062WQ02781 134 aa5.54□□□□□ -1.52
SSK1YLR006C MMT1Q03218 510 aa5.54□□□□□ -1.52
SSK1YLR006C RSM24Q03976 319 aa5.54□□□□□ -1.52
SSK1YLR006C VPS74Q06385 345 aa5.54□□□□□ -1.52
SSK1YLR006C YPD1Q07688 167 aa5.54□□□□□ -1.52
SSK1YLR006C GPB1Q08886 897 aa5.54□□□□□ -1.52
SSK1YLR006C HEM2P05373 342 aa5.53□□□□□ -1.52
SSK1YLR006C FRS1P15624 595 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C RSA4P25382 515 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C NTR2P36118 322 aaPredicted RBP5.53□□□□□ -1.52
SSK1YLR006C SKG1P36169 355 aa5.53□□□□□ -1.52
SSK1YLR006C FAD1P38913 306 aa5.53□□□□□ -1.52
SSK1YLR006C YER121WP40076 114 aa5.53□□□□□ -1.52
SSK1YLR006C MDV1P47025 714 aa5.53□□□□□ -1.52
SSK1YLR006C RTT101P47050 842 aa5.53□□□□□ -1.52
SSK1YLR006C SPC98P53540 846 aa5.53□□□□□ -1.52
SSK1YLR006C PEX13P80667 386 aa5.53□□□□□ -1.52
SSK1YLR006C CDC14Q00684 551 aa5.53□□□□□ -1.52
SSK1YLR006C YMR099CQ03161 297 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C RCR2Q03446 210 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C FMP42Q04991 504 aa5.53□□□□□ -1.52
SSK1YLR006C ARO10Q06408 635 aa5.53□□□□□ -1.52
SSK1YLR006C ECM30Q06673 1274 aa5.53□□□□□ -1.52
SSK1YLR006C DCI1Q08558 271 aa5.53□□□□□ -1.52
SSK1YLR006C YDR262WQ12331 272 aa5.53□□□□□ -1.52
SSK1YLR006C RPL6BP05739 176 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C HIS3P06633 220 aa5.53□□□□□ -1.52
SSK1YLR006C POL30P15873 258 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C AAR2P32357 355 aaPredicted RBP5.53□□□□□ -1.52
SSK1YLR006C PET127P32606 800 aa5.53□□□□□ -1.52
SSK1YLR006C YBR056WP38081 501 aa5.53□□□□□ -1.52
SSK1YLR006C MAL32P38158 584 aa5.53□□□□□ -1.52
SSK1YLR006C RFS1P38234 210 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C SOP4P39543 234 aaPredicted RBP5.53□□□□□ -1.52
SSK1YLR006C UTP25P40498 721 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C RAI1P53063 387 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C BOL2P53082 120 aa5.53□□□□□ -1.52
SSK1YLR006C MAL12P53341 584 aa5.53□□□□□ -1.52
SSK1YLR006C RPL6AQ02326 176 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C KAP120Q02932 1032 aa5.53□□□□□ -1.52
SSK1YLR006C TRM12Q04235 462 aa5.53□□□□□ -1.52
SSK1YLR006C PEX12Q04370 399 aa5.53□□□□□ -1.52
SSK1YLR006C RQC1Q05468 723 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C YPR147CQ06522 304 aaKnown RBP5.53□□□□□ -1.52
SSK1YLR006C BSC6Q08280 497 aa5.53□□□□□ -1.52
SSK1YLR006C ENV7Q12003 364 aa5.53□□□□□ -1.52
SSK1YLR006C GPM2Q12008 311 aa5.53□□□□□ -1.52
SSK1YLR006C YLR049CQ12110 428 aa5.53□□□□□ -1.52
SSK1YLR006C TDH2P00358 332 aaKnown RBP5.52□□□□□ -1.53
SSK1YLR006C TDH3P00359 332 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms