RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W TPP1Q03796 238 aa5.46□□□□□ -1.54
VMS1YDR049W CDA1Q06702 301 aa5.46□□□□□ -1.54
VMS1YDR049W CDA2Q06703 312 aa5.46□□□□□ -1.54
VMS1YDR049W FRE5Q08908 694 aa5.46□□□□□ -1.54
VMS1YDR049W TRM11Q12463 433 aa5.46□□□□□ -1.54
VMS1YDR049W YBR255C-AQ3E776 120 aa5.46□□□□□ -1.54
VMS1YDR049W YCL012CQ8J0M4 134 aa5.46□□□□□ -1.54
VMS1YDR049W ECM3Q99252 613 aa5.46□□□□□ -1.54
VMS1YDR049W NUP170P38181 1502 aa5.46□□□□□ -1.54
VMS1YDR049W NFT1P0CE68 1218 aa5.45□□□□□ -1.54
VMS1YDR049W ERG9P29704 444 aa5.45□□□□□ -1.54
VMS1YDR049W YSC83P32792 385 aa5.45□□□□□ -1.54
VMS1YDR049W TAF14P35189 244 aa5.45□□□□□ -1.54
VMS1YDR049W YHR112CP38716 378 aa5.45□□□□□ -1.54
VMS1YDR049W SPC97P38863 823 aa5.45□□□□□ -1.54
VMS1YDR049W CCT2P39076 527 aaKnown RBP5.45□□□□□ -1.54
VMS1YDR049W YKE4P40544 346 aa5.45□□□□□ -1.54
VMS1YDR049W CIN5P40917 295 aa5.45□□□□□ -1.54
VMS1YDR049W APS3P47064 194 aa5.45□□□□□ -1.54
VMS1YDR049W CWC23P52868 283 aaPredicted RBP5.45□□□□□ -1.54
VMS1YDR049W GET1P53192 235 aa5.45□□□□□ -1.54
VMS1YDR049W KRE28Q04431 385 aa5.45□□□□□ -1.54
VMS1YDR049W ORM2Q06144 216 aa5.45□□□□□ -1.54
VMS1YDR049W AAD15Q08361 143 aa5.45□□□□□ -1.54
VMS1YDR049W PUS7Q08647 676 aaKnown RBP5.45□□□□□ -1.54
VMS1YDR049W QCR7P00128 127 aa5.45□□□□□ -1.54
VMS1YDR049W HTB1P02293 131 aaKnown RBP5.45□□□□□ -1.54
VMS1YDR049W HTB2P02294 131 aa5.45□□□□□ -1.54
VMS1YDR049W SNA3P14359 133 aa5.45□□□□□ -1.54
VMS1YDR049W DAL82P21705 255 aa5.45□□□□□ -1.54
VMS1YDR049W NAR1P23503 491 aaKnown RBP5.45□□□□□ -1.54
VMS1YDR049W ELO2P25358 347 aa5.45□□□□□ -1.54
VMS1YDR049W NAM9P27929 486 aa5.45□□□□□ -1.54
VMS1YDR049W REC114P32841 428 aa5.45□□□□□ -1.54
VMS1YDR049W HMT1P38074 348 aa5.45□□□□□ -1.54
VMS1YDR049W YHR177WP38867 453 aa5.45□□□□□ -1.54
VMS1YDR049W GIP2P40036 548 aa5.45□□□□□ -1.54
VMS1YDR049W POG1P40473 351 aa5.45□□□□□ -1.54
VMS1YDR049W UTP25P40498 721 aaKnown RBP5.45□□□□□ -1.54
VMS1YDR049W YDL186WP48568 277 aa5.45□□□□□ -1.54
VMS1YDR049W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
VMS1YDR049W GIS1Q03833 894 aa5.45□□□□□ -1.54
VMS1YDR049W AAC1P04710 309 aa5.44□□□□□ -1.54
VMS1YDR049W PDE1P22434 369 aa5.44□□□□□ -1.54
VMS1YDR049W YSP3P25036 478 aa5.44□□□□□ -1.54
VMS1YDR049W RPC34P32910 317 aa5.44□□□□□ -1.54
VMS1YDR049W TRM2P33753 639 aa5.44□□□□□ -1.54
VMS1YDR049W NTR2P36118 322 aaPredicted RBP5.44□□□□□ -1.54
VMS1YDR049W URA8P38627 578 aaPredicted RBP5.44□□□□□ -1.54
VMS1YDR049W ARO9P38840 513 aaPredicted RBP5.44□□□□□ -1.54
VMS1YDR049W VAB2P40003 282 aa5.44□□□□□ -1.54
VMS1YDR049W IRC7P43623 340 aa5.44□□□□□ -1.54
VMS1YDR049W BNA3P47039 444 aaKnown RBP5.44□□□□□ -1.54
VMS1YDR049W RTT101P47050 842 aa5.44□□□□□ -1.54
VMS1YDR049W YGR079WP53249 370 aa5.44□□□□□ -1.54
VMS1YDR049W ADH6Q04894 360 aaKnown RBP5.44□□□□□ -1.54
VMS1YDR049W CYK3Q07533 885 aa5.44□□□□□ -1.54
VMS1YDR049W MUM3Q08750 479 aa5.44□□□□□ -1.54
VMS1YDR049W CSM4Q08955 156 aa5.44□□□□□ -1.54
VMS1YDR049W YPR1Q12458 312 aa5.44□□□□□ -1.54
VMS1YDR049W RRI1Q12468 440 aa5.44□□□□□ -1.54
VMS1YDR049W YLL053CP0CD98 152 aa5.43□□□□□ -1.54
VMS1YDR049W BPT1P14772 1559 aa5.43□□□□□ -1.54
VMS1YDR049W RPO26P20435 155 aa5.43□□□□□ -1.54
VMS1YDR049W ISY1P21374 235 aaPredicted RBP5.43□□□□□ -1.54
VMS1YDR049W NRP1P32770 719 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
VMS1YDR049W QDR3P38227 689 aa5.43□□□□□ -1.54
VMS1YDR049W YBR259WP38338 688 aa5.43□□□□□ -1.54
VMS1YDR049W ACO2P39533 789 aa5.43□□□□□ -1.54
VMS1YDR049W YNL194CP40169 301 aa5.43□□□□□ -1.54
VMS1YDR049W RPC17P47076 161 aa5.43□□□□□ -1.54
VMS1YDR049W YJR056CP47115 236 aa5.43□□□□□ -1.54
VMS1YDR049W YJR149WP47177 404 aa5.43□□□□□ -1.54
VMS1YDR049W YGL108CP53139 140 aa5.43□□□□□ -1.54
VMS1YDR049W COQ9Q05779 260 aa5.43□□□□□ -1.54
VMS1YDR049W BUR2Q05949 395 aa5.43□□□□□ -1.54
VMS1YDR049W YPL216WQ08964 1102 aa5.43□□□□□ -1.54
VMS1YDR049W MRH1Q12117 320 aaPredicted RBP5.43□□□□□ -1.54
VMS1YDR049W YKL183C-AQ3E765 70 aa5.43□□□□□ -1.54
VMS1YDR049W HIS4P00815 799 aaKnown RBP5.43□□□□□ -1.54
VMS1YDR049W RIP1P08067 215 aa5.43□□□□□ -1.54
VMS1YDR049W YBR121C-AP0C5L4 52 aa5.43□□□□□ -1.54
VMS1YDR049W MAS2P11914 482 aa5.43□□□□□ -1.54
VMS1YDR049W DBR1P24309 405 aaKnown RBP5.43□□□□□ -1.54
VMS1YDR049W MNS1P32906 549 aa5.43□□□□□ -1.54
VMS1YDR049W SPT10P35208 640 aa5.43□□□□□ -1.54
VMS1YDR049W LNP1P38878 278 aa5.43□□□□□ -1.54
VMS1YDR049W CEM1P39525 442 aa5.43□□□□□ -1.54
VMS1YDR049W UIP3P39547 235 aa5.43□□□□□ -1.54
VMS1YDR049W DSE1P40077 573 aa5.43□□□□□ -1.54
VMS1YDR049W JLP2P40206 208 aa5.43□□□□□ -1.54
VMS1YDR049W PAC11P40960 533 aa5.43□□□□□ -1.54
VMS1YDR049W ASI2P53895 289 aa5.43□□□□□ -1.54
VMS1YDR049W PRP38Q00723 242 aaPredicted RBP5.43□□□□□ -1.54
VMS1YDR049W COQ11Q05892 277 aa5.43□□□□□ -1.54
VMS1YDR049W YPD1Q07688 167 aa5.43□□□□□ -1.54
VMS1YDR049W AIM45Q12480 344 aaKnown RBP5.43□□□□□ -1.54
VMS1YDR049W NOT5Q12514 560 aaPredicted RBP5.43□□□□□ -1.54
VMS1YDR049W RPO31P04051 1460 aa5.43□□□□□ -1.54
VMS1YDR049W RKR1Q04781 1562 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms