RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W ATP23P53722 227 aa1.96□□□□□ -2.1
VPS8YAL002W HEF3P53978 1044 aaKnown RBP1.96□□□□□ -2.1
VPS8YAL002W SHR3Q02774 210 aa1.96□□□□□ -2.1
VPS8YAL002W EKI1Q03764 534 aa1.96□□□□□ -2.1
VPS8YAL002W ATG9Q12142 997 aa1.96□□□□□ -2.1
VPS8YAL002W RRD2Q12461 358 aa1.96□□□□□ -2.1
VPS8YAL002W CMC2Q3E7A4 109 aa1.96□□□□□ -2.1
VPS8YAL002W RPL7AP05737 244 aaKnown RBP1.95□□□□□ -2.1
VPS8YAL002W MSF1P08425 469 aa1.95□□□□□ -2.1
VPS8YAL002W SNF3P10870 884 aa1.95□□□□□ -2.1
VPS8YAL002W PMR1P13586 950 aa1.95□□□□□ -2.1
VPS8YAL002W SEC62P21825 274 aa1.95□□□□□ -2.1
VPS8YAL002W PRS1P32895 427 aaKnown RBP1.95□□□□□ -2.1
VPS8YAL002W BUD2P33314 1104 aa1.95□□□□□ -2.1
VPS8YAL002W YHR210CP38893 341 aa1.95□□□□□ -2.1
VPS8YAL002W FLO5P38894 1075 aa1.95□□□□□ -2.1
VPS8YAL002W END3P39013 349 aa1.95□□□□□ -2.1
VPS8YAL002W PCF11P39081 626 aaPredicted RBP1.95□□□□□ -2.1
VPS8YAL002W YGL185CP53100 379 aa1.95□□□□□ -2.1
VPS8YAL002W ZPR1P53303 486 aaKnown RBP1.95□□□□□ -2.1
VPS8YAL002W SUN4P53616 420 aa1.95□□□□□ -2.1
VPS8YAL002W SLG1P54867 378 aa1.95□□□□□ -2.1
VPS8YAL002W SMX3P54999 86 aaPredicted RBP1.95□□□□□ -2.1
VPS8YAL002W TMN2Q04562 672 aa1.95□□□□□ -2.1
VPS8YAL002W LOT6Q07923 191 aa1.95□□□□□ -2.1
VPS8YAL002W RPL7BQ12213 244 aaKnown RBP1.95□□□□□ -2.1
VPS8YAL002W YRF1-3P0CX14 1859 aa1.95□□□□□ -2.1
VPS8YAL002W YRF1-7P0CX15 1859 aa1.95□□□□□ -2.1
VPS8YAL002W YRF1-6P53819 1859 aa1.95□□□□□ -2.1
VPS8YAL002W CHO2P05374 869 aaKnown RBP1.95□□□□□ -2.1
VPS8YAL002W RHO2P06781 192 aa1.95□□□□□ -2.1
VPS8YAL002W PUT2P07275 575 aa1.95□□□□□ -2.1
VPS8YAL002W RIP1P08067 215 aa1.95□□□□□ -2.1
VPS8YAL002W AQY1P0CD91 305 aa1.95□□□□□ -2.1
VPS8YAL002W PCT1P13259 424 aa1.95□□□□□ -2.1
VPS8YAL002W ALG1P16661 449 aa1.95□□□□□ -2.1
VPS8YAL002W RME1P32338 300 aaKnown RBP1.95□□□□□ -2.1
VPS8YAL002W RIX1P38883 763 aaPredicted RBP1.95□□□□□ -2.1
VPS8YAL002W YHB1P39676 399 aaKnown RBP1.95□□□□□ -2.1
VPS8YAL002W GLG2P47011 380 aa1.95□□□□□ -2.1
VPS8YAL002W VPS25P47142 202 aa1.95□□□□□ -2.1
VPS8YAL002W ORC5P50874 479 aa1.95□□□□□ -2.1
VPS8YAL002W CAB5Q03941 241 aa1.95□□□□□ -2.1
VPS8YAL002W SMC5Q08204 1093 aa1.95□□□□□ -2.1
VPS8YAL002W MCH4Q08268 501 aa1.95□□□□□ -2.1
VPS8YAL002W PUS9Q12069 462 aa1.95□□□□□ -2.1
VPS8YAL002W LSP1Q12230 341 aaKnown RBP1.95□□□□□ -2.1
VPS8YAL002W FMP16Q12497 93 aa1.95□□□□□ -2.1
VPS8YAL002W CDC36P06100 191 aaPredicted RBP1.95□□□□□ -2.1
VPS8YAL002W CDC21P06785 304 aa1.95□□□□□ -2.1
VPS8YAL002W YPK2P18961 677 aa1.95□□□□□ -2.1
VPS8YAL002W ELO2P25358 347 aa1.95□□□□□ -2.1
VPS8YAL002W CYM1P32898 989 aa1.95□□□□□ -2.1
VPS8YAL002W SPP381P38282 291 aaPredicted RBP1.95□□□□□ -2.1
VPS8YAL002W ERG7P38604 731 aa1.95□□□□□ -2.1
VPS8YAL002W YHR045WP38775 560 aa1.95□□□□□ -2.1
VPS8YAL002W SPG5P42933 373 aa1.95□□□□□ -2.1
VPS8YAL002W YAR1P46683 200 aa1.95□□□□□ -2.1
VPS8YAL002W TAX4P47030 604 aa1.95□□□□□ -2.1
VPS8YAL002W HSH155P49955 971 aaKnown RBP1.95□□□□□ -2.1
VPS8YAL002W BUD32P53323 261 aa1.95□□□□□ -2.1
VPS8YAL002W YNL260CP53846 198 aa1.95□□□□□ -2.1
VPS8YAL002W POS5Q06892 414 aa1.95□□□□□ -2.1
VPS8YAL002W NSE1Q07913 336 aa1.95□□□□□ -2.1
VPS8YAL002W YOL107WQ12239 342 aa1.95□□□□□ -2.1
VPS8YAL002W DAL2P25335 343 aa1.94□□□□□ -2.1
VPS8YAL002W PSO2P30620 661 aa1.94□□□□□ -2.1
VPS8YAL002W APE2P32454 952 aaKnown RBP1.94□□□□□ -2.1
VPS8YAL002W TRM2P33753 639 aa1.94□□□□□ -2.1
VPS8YAL002W AIM29P36154 155 aa1.94□□□□□ -2.1
VPS8YAL002W STN1P38960 494 aa1.94□□□□□ -2.1
VPS8YAL002W MIT1P40002 666 aa1.94□□□□□ -2.1
VPS8YAL002W SNL1P40548 159 aa1.94□□□□□ -2.1
VPS8YAL002W AIM22P47051 409 aa1.94□□□□□ -2.1
VPS8YAL002W ERG26P53199 349 aaKnown RBP1.94□□□□□ -2.1
VPS8YAL002W ESBP6P53918 673 aa1.94□□□□□ -2.1
VPS8YAL002W RPS15Q01855 142 aaKnown RBP1.94□□□□□ -2.1
VPS8YAL002W GIP3Q03016 1276 aa1.94□□□□□ -2.1
VPS8YAL002W HRD3Q05787 833 aa1.94□□□□□ -2.1
VPS8YAL002W REX4Q08237 289 aa1.94□□□□□ -2.1
VPS8YAL002W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
VPS8YAL002W GIS3Q12418 502 aa1.94□□□□□ -2.1
VPS8YAL002W SCEIP03882 235 aa1.94□□□□□ -2.1
VPS8YAL002W SGV1P23293 657 aaKnown RBP1.94□□□□□ -2.1
VPS8YAL002W ADY2P25613 283 aa1.94□□□□□ -2.1
VPS8YAL002W SIN4P32259 974 aa1.94□□□□□ -2.1
VPS8YAL002W RPC25P35718 212 aa1.94□□□□□ -2.1
VPS8YAL002W RSM22P36056 628 aa1.94□□□□□ -2.1
VPS8YAL002W EFM2P38347 419 aa1.94□□□□□ -2.1
VPS8YAL002W PCA1P38360 1216 aa1.94□□□□□ -2.1
VPS8YAL002W ATG27P46989 271 aa1.94□□□□□ -2.1
VPS8YAL002W UBP8P50102 471 aa1.94□□□□□ -2.1
VPS8YAL002W YGL108CP53139 140 aa1.94□□□□□ -2.1
VPS8YAL002W LGE1Q02796 332 aaKnown RBP1.94□□□□□ -2.1
VPS8YAL002W GET4Q12125 312 aa1.94□□□□□ -2.1
VPS8YAL002W ATG31Q12421 196 aa1.94□□□□□ -2.1
VPS8YAL002W ADE4P04046 510 aaKnown RBP1.94□□□□□ -2.1
VPS8YAL002W DAL81P21657 970 aa1.94□□□□□ -2.1
VPS8YAL002W YUR1P26725 428 aa1.94□□□□□ -2.1
VPS8YAL002W YMC2P38087 329 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms