RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 RCN2Q12044 265 aa1.69□□□□□ -2.14
snR56snR56 NAG1Q8TGN9 163 aa1.69□□□□□ -2.14
snR56snR56 CBS1P14066 229 aa1.68□□□□□ -2.14
snR56snR56 MRX6P48564 524 aa1.68□□□□□ -2.14
snR56snR56 SKI8Q02793 397 aaPredicted RBP1.68□□□□□ -2.14
snR56snR56 COX14P39103 70 aa1.67□□□□□ -2.14
snR56snR56 GAT2P40209 560 aa1.67□□□□□ -2.14
snR56snR56 MET28P40573 187 aa1.67□□□□□ -2.14
snR56snR56 TWF1P53250 332 aa1.67□□□□□ -2.14
snR56snR56 MEP3P53390 489 aa1.67□□□□□ -2.14
snR56snR56 RPL21AQ02753 160 aaKnown RBP1.67□□□□□ -2.14
snR56snR56 RAX1Q08760 435 aa1.67□□□□□ -2.14
snR56snR56 RPL21BQ12672 160 aaKnown RBP1.67□□□□□ -2.14
snR56snR56 FOB1O13329 566 aa1.66□□□□□ -2.14
snR56snR56 RIP1P08067 215 aa1.66□□□□□ -2.14
snR56snR56 RRP1P35178 278 aaPredicted RBP1.66□□□□□ -2.14
snR56snR56 RFC3P38629 340 aa1.66□□□□□ -2.14
snR56snR56 HAC1P41546 238 aa1.66□□□□□ -2.14
snR56snR56 YJR011CP47086 261 aaPredicted RBP1.66□□□□□ -2.14
snR56snR56 OAZ1Q02803 292 aa1.66□□□□□ -2.14
snR56snR56 MDM36Q06820 579 aa1.66□□□□□ -2.14
snR56snR56 SRL2Q12020 392 aa1.66□□□□□ -2.14
snR56snR56 TIR4Q12218 487 aaPredicted RBP1.66□□□□□ -2.14
snR56snR56 SIN4P32259 974 aa1.65□□□□□ -2.15
snR56snR56 SEC66P33754 206 aa1.65□□□□□ -2.15
snR56snR56 CST26P38226 397 aa1.65□□□□□ -2.15
snR56snR56 PFS1P38872 237 aa1.65□□□□□ -2.15
snR56snR56 DOT5P40553 215 aa1.65□□□□□ -2.15
snR56snR56 PHB2P50085 310 aa1.65□□□□□ -2.15
snR56snR56 CLD1P53264 445 aa1.65□□□□□ -2.15
snR56snR56 ATG16Q03818 150 aa1.65□□□□□ -2.15
snR56snR56 ECM7Q06200 448 aa1.65□□□□□ -2.15
snR56snR56 RRP9Q06506 573 aaKnown RBP1.65□□□□□ -2.15
snR56snR56 BEM2P39960 2167 aaKnown RBP1.64□□□□□ -2.15
snR56snR56 RPS19AP07280 144 aaKnown RBP1.64□□□□□ -2.15
snR56snR56 RPS19BP07281 144 aaPredicted RBP1.64□□□□□ -2.15
snR56snR56 SPS4P09937 338 aa1.64□□□□□ -2.15
snR56snR56 DEP1P31385 405 aa1.64□□□□□ -2.15
snR56snR56 MUD2P36084 527 aaKnown RBP1.64□□□□□ -2.15
snR56snR56 VTC2P43585 828 aa1.64□□□□□ -2.15
snR56snR56 LCB3P47013 409 aa1.64□□□□□ -2.15
snR56snR56 AIM24P47127 394 aa1.64□□□□□ -2.15
snR56snR56 GPI15P53961 229 aa1.64□□□□□ -2.15
snR56snR56 RIM20Q12033 661 aa1.64□□□□□ -2.15
snR56snR56 GPH1P06738 902 aaKnown RBP1.63□□□□□ -2.15
snR56snR56 CLN1P20437 546 aa1.63□□□□□ -2.15
snR56snR56 YCL068CP25593 260 aa1.63□□□□□ -2.15
snR56snR56 YEF1P32622 495 aa1.63□□□□□ -2.15
snR56snR56 VHC1P38329 1120 aa1.63□□□□□ -2.15
snR56snR56 YHK8P38776 514 aa1.63□□□□□ -2.15
snR56snR56 FHL1P39521 936 aa1.63□□□□□ -2.15
snR56snR56 YJL144WP47009 104 aa1.63□□□□□ -2.15
snR56snR56 GIR2Q03768 265 aaPredicted RBP1.63□□□□□ -2.15
snR56snR56 SMC5Q08204 1093 aa1.63□□□□□ -2.15
snR56snR56 TPT1Q12272 230 aaKnown RBP1.63□□□□□ -2.15
snR56snR56 DPH5P32469 300 aaPredicted RBP1.62□□□□□ -2.15
snR56snR56 SKN1P33336 771 aa1.62□□□□□ -2.15
snR56snR56 YIR035CP40579 254 aa1.62□□□□□ -2.15
snR56snR56 HST4P53688 370 aa1.62□□□□□ -2.15
snR56snR56 TDA1Q03533 586 aa1.62□□□□□ -2.15
snR56snR56 CEX1Q12453 761 aa1.62□□□□□ -2.15
snR56snR56 CBF5P33322 483 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
snR56snR56 YNL208WP40159 199 aaKnown RBP1.61□□□□□ -2.15
snR56snR56 MAM33P40513 266 aa1.61□□□□□ -2.15
snR56snR56 STB1P42845 420 aa1.61□□□□□ -2.15
snR56snR56 VHT1P53241 593 aa1.61□□□□□ -2.15
snR56snR56 OPY2Q06810 360 aa1.61□□□□□ -2.15
snR56snR56 TFB1P32776 642 aa1.6□□□□□ -2.15
snR56snR56 YAL037WP39728 267 aa1.6□□□□□ -2.15
snR56snR56 YEL057CP39983 233 aa1.6□□□□□ -2.15
snR56snR56 SEM1O94742 89 aa1.59□□□□□ -2.15
snR56snR56 PMT1P33775 817 aa1.59□□□□□ -2.15
snR56snR56 CMC1P36064 111 aa1.59□□□□□ -2.15
snR56snR56 NOP4P37838 685 aaKnown RBP1.59□□□□□ -2.15
snR56snR56 RPT6Q01939 405 aaKnown RBP1.59□□□□□ -2.15
snR56snR56 CCE1Q03702 353 aa1.59□□□□□ -2.15
snR56snR56 YML133CQ03099 1374 aa1.59□□□□□ -2.16
snR56snR56 YLL067CQ07888 1374 aa1.59□□□□□ -2.16
snR56snR56 YLL066CQ99208 1374 aa1.59□□□□□ -2.16
snR56snR56 COX13P32799 129 aa1.58□□□□□ -2.16
snR56snR56 HEL1P36113 551 aa1.58□□□□□ -2.16
snR56snR56 COQ5P49017 307 aa1.58□□□□□ -2.16
snR56snR56 YGR250CP53316 781 aaKnown RBP1.58□□□□□ -2.16
snR56snR56 VPS75P53853 264 aa1.58□□□□□ -2.16
snR56snR56 YMR018WQ04364 514 aa1.58□□□□□ -2.16
snR56snR56 MDM30Q05930 598 aa1.58□□□□□ -2.16
snR56snR56 EAF3Q12432 401 aa1.58□□□□□ -2.16
snR56snR56 YPR096CO13587 100 aa1.57□□□□□ -2.16
snR56snR56 AST1P35183 429 aa1.57□□□□□ -2.16
snR56snR56 YGP1P38616 354 aaKnown RBP1.57□□□□□ -2.16
snR56snR56 YPT35P38815 214 aaKnown RBP1.57□□□□□ -2.16
snR56snR56 HXT14P42833 540 aa1.57□□□□□ -2.16
snR56snR56 ZRG17P53735 605 aa1.56□□□□□ -2.16
snR56snR56 TAF12Q03761 539 aa1.56□□□□□ -2.16
snR56snR56 ATG29Q12092 213 aa1.56□□□□□ -2.16
snR56snR56 UTR5P32630 166 aa1.55□□□□□ -2.16
snR56snR56 SRB2P34162 210 aa1.55□□□□□ -2.16
snR56snR56 APE3P37302 537 aaKnown RBP1.55□□□□□ -2.16
snR56snR56 LOT6Q07923 191 aa1.55□□□□□ -2.16
snR56snR56 YOL085CQ99345 113 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 108.5 ms