RNA–Protein interactions for RNA: YPL078C

ATP4, Transcript of Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP4, Length 735 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP4	YPL078C	GEP3	Q08622	556 aa		6.12	□□□□□ -1.43
ATP4	YPL078C	RMD5	Q12508	421 aa		6.12	□□□□□ -1.43
ATP4	YPL078C	COX2	P00410	251 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	GDH1	P07262	454 aa	Known RBP	6.11	□□□□□ -1.43
ATP4	YPL078C	RPL35A	P0CX84	120 aa	Known RBP	6.11	□□□□□ -1.43
ATP4	YPL078C	RPL35B	P0CX85	120 aa	Known RBP	6.11	□□□□□ -1.43
ATP4	YPL078C	FAR1	P21268	830 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	PEX3	P28795	441 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	YSC83	P32792	385 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	CBT1	P36038	271 aa	Predicted RBP	6.11	□□□□□ -1.43
ATP4	YPL078C	BIG1	P38813	335 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	YHR122W	P38829	231 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	CIN4	P39110	191 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	ELO1	P39540	310 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	UTP25	P40498	721 aa	Known RBP	6.11	□□□□□ -1.43
ATP4	YPL078C	TAX4	P47030	604 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	NPA3	P47122	385 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	YPT11	P48559	417 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	ADE16	P54113	591 aa	Known RBP	6.11	□□□□□ -1.43
ATP4	YPL078C	MRS2	Q01926	470 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	RNT1	Q02555	471 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	UBP16	Q02863	499 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	IZH1	Q03419	316 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	ARP10	Q04549	284 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	YDR109C	Q04585	715 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	ADH6	Q04894	360 aa	Known RBP	6.11	□□□□□ -1.43
ATP4	YPL078C	HPF1	Q05164	967 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	COQ9	Q05779	260 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	BUR2	Q05949	395 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	MRI1	Q06489	411 aa	Known RBP	6.11	□□□□□ -1.43
ATP4	YPL078C	WHI4	Q07655	649 aa	Known RBP	6.11	□□□□□ -1.43
ATP4	YPL078C	GPM2	Q12008	311 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
ATP4	YPL078C	RUP1	Q12242	671 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	YLR108C	Q12259	485 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	RGS2	Q99188	309 aa		6.11	□□□□□ -1.43
ATP4	YPL078C	RAV1	P47104	1357 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	AAC1	P04710	309 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	MRP1	P10662	321 aa	Known RBP	6.1	□□□□□ -1.43
ATP4	YPL078C	DAL82	P21705	255 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	SGV1	P23293	657 aa	Known RBP	6.1	□□□□□ -1.43
ATP4	YPL078C	RRT12	P25381	491 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	ADE1	P27616	306 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	VMA6	P32366	345 aa	Known RBP	6.1	□□□□□ -1.43
ATP4	YPL078C	COS9	P36034	407 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	RPL32	P38061	130 aa	Known RBP	6.1	□□□□□ -1.43
ATP4	YPL078C	RIB1	P38066	345 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	QDR3	P38227	689 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	MSS4	P38994	779 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	AGE2	P40529	298 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	ERG10	P41338	398 aa	Known RBP	6.1	□□□□□ -1.43
ATP4	YPL078C	ATG27	P46989	271 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	LSM1	P47017	172 aa	Known RBP	6.1	□□□□□ -1.43
ATP4	YPL078C	TEX1	P53851	422 aa	Known RBP	6.1	□□□□□ -1.43
ATP4	YPL078C	TEN1	Q07921	160 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	REX4	Q08237	289 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	RRI1	Q12468	440 aa		6.1	□□□□□ -1.43
ATP4	YPL078C	ECM5	Q03214	1411 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	THP2	O13539	261 aa	Known RBP	6.09	□□□□□ -1.43
ATP4	YPL078C	COX1	P00401	534 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	WHI2	P12611	486 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	ABF1	P14164	731 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	VPS1	P21576	704 aa	Known RBP	6.09	□□□□□ -1.43
ATP4	YPL078C	RPS5	P26783	225 aa	Known RBP	6.09	□□□□□ -1.43
ATP4	YPL078C	ERG9	P29704	444 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	GCG1	P32656	232 aa	Known RBP	6.09	□□□□□ -1.43
ATP4	YPL078C	RRN10	P38204	145 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	PTC7	P38797	343 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	ECM10	P39987	644 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	GIM4	P40005	111 aa	Known RBP	6.09	□□□□□ -1.43
ATP4	YPL078C	DSE1	P40077	573 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	YFL066C	P43538	392 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	FHN1	P53279	174 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	RRN9	P53437	365 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	NUP116	Q02630	1113 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	EBS1	Q03466	884 aa	Known RBP	6.09	□□□□□ -1.43
ATP4	YPL078C	PEX12	Q04370	399 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	COQ11	Q05892	277 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	RIB2	Q12362	591 aa	Known RBP	6.09	□□□□□ -1.43
ATP4	YPL078C	TRM11	Q12463	433 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	ZPS1	Q12512	249 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	AI5_ALPHA	Q9ZZX1	630 aa		6.09	□□□□□ -1.43
ATP4	YPL078C	RPP2A	P05319	106 aa	Known RBP	6.08	□□□□□ -1.44
ATP4	YPL078C	RIP1	P08067	215 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	PRP4	P20053	465 aa	Known RBP	6.08	□□□□□ -1.44
ATP4	YPL078C	YSP3	P25036	478 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	PUT3	P25502	979 aa	Predicted RBP	6.08	□□□□□ -1.44
ATP4	YPL078C	SPS19	P32573	292 aa	Known RBP	6.08	□□□□□ -1.44
ATP4	YPL078C	RPC34	P32910	317 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	SKT5	P34226	696 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	PRS4	P38063	326 aa	Predicted RBP	6.08	□□□□□ -1.44
ATP4	YPL078C	MIC12	P38341	106 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	SOP4	P39543	234 aa	Predicted RBP	6.08	□□□□□ -1.44
ATP4	YPL078C	NDC80	P40460	691 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	MSY1	P48527	492 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	YDL186W	P48568	277 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	GET1	P53192	235 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	YGR035C	P53222	116 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	FMP30	Q02883	468 aa		6.08	□□□□□ -1.44
ATP4	YPL078C	SPO77	Q06134	477 aa		6.08	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms