RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W TY1B-ER2Q03619 1755 aa1.4□□□□□ -2.19
SMC4YLR086W TY1B-MR1Q04214 1755 aa1.4□□□□□ -2.19
SMC4YLR086W TY1B-MR2Q04670 1755 aaKnown RBP1.4□□□□□ -2.19
SMC4YLR086W TY1B-LR1Q12088 1755 aaKnown RBP1.4□□□□□ -2.19
SMC4YLR086W TY1B-NL1Q12112 1755 aa1.4□□□□□ -2.19
SMC4YLR086W TY1B-GR1Q12141 1755 aa1.4□□□□□ -2.19
SMC4YLR086W TY1B-BLQ12490 1755 aa1.4□□□□□ -2.19
SMC4YLR086W DNF3Q12674 1656 aa1.4□□□□□ -2.19
SMC4YLR086W URA4P20051 364 aa1.4□□□□□ -2.19
SMC4YLR086W PTP1P25044 335 aa1.4□□□□□ -2.19
SMC4YLR086W PUT3P25502 979 aaPredicted RBP1.4□□□□□ -2.19
SMC4YLR086W RRP1P35178 278 aaPredicted RBP1.4□□□□□ -2.19
SMC4YLR086W RRN10P38204 145 aa1.4□□□□□ -2.19
SMC4YLR086W MMS4P38257 691 aa1.4□□□□□ -2.19
SMC4YLR086W DHH1P39517 506 aaKnown RBP1.4□□□□□ -2.19
SMC4YLR086W AFG3P39925 761 aa1.4□□□□□ -2.19
SMC4YLR086W GCD10P41814 478 aa1.4□□□□□ -2.19
SMC4YLR086W IDP2P41939 412 aa1.4□□□□□ -2.19
SMC4YLR086W SCW4P53334 386 aaKnown RBP1.4□□□□□ -2.19
SMC4YLR086W SRL2Q12020 392 aa1.4□□□□□ -2.19
SMC4YLR086W HER1Q12276 1246 aa1.4□□□□□ -2.19
SMC4YLR086W QCR6P00127 147 aa1.39□□□□□ -2.19
SMC4YLR086W RPL15AP05748 204 aaKnown RBP1.39□□□□□ -2.19
SMC4YLR086W RPL3P14126 387 aaKnown RBP1.39□□□□□ -2.19
SMC4YLR086W ALG1P16661 449 aa1.39□□□□□ -2.19
SMC4YLR086W RHB1P25378 209 aa1.39□□□□□ -2.19
SMC4YLR086W MGR1P25573 417 aa1.39□□□□□ -2.19
SMC4YLR086W TIP1P27654 210 aaPredicted RBP1.39□□□□□ -2.19
SMC4YLR086W POT1P27796 417 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SMC4YLR086W YAP3P38749 330 aa1.39□□□□□ -2.19
SMC4YLR086W BZZ1P38822 633 aa1.39□□□□□ -2.19
SMC4YLR086W MST28P39552 234 aa1.39□□□□□ -2.19
SMC4YLR086W LCP5P40079 357 aaPredicted RBP1.39□□□□□ -2.19
SMC4YLR086W YMR134WP40207 237 aa1.39□□□□□ -2.19
SMC4YLR086W PAC11P40960 533 aa1.39□□□□□ -2.19
SMC4YLR086W MAF1P41910 395 aa1.39□□□□□ -2.19
SMC4YLR086W GWT1P47026 490 aa1.39□□□□□ -2.19
SMC4YLR086W YDL186WP48568 277 aa1.39□□□□□ -2.19
SMC4YLR086W RTT102P53330 157 aa1.39□□□□□ -2.19
SMC4YLR086W DSL1P53847 754 aa1.39□□□□□ -2.19
SMC4YLR086W TDA7P53882 636 aaPredicted RBP1.39□□□□□ -2.19
SMC4YLR086W PRO2P54885 456 aaKnown RBP1.39□□□□□ -2.19
SMC4YLR086W RSN1Q03516 953 aa1.39□□□□□ -2.19
SMC4YLR086W UBX2Q04228 584 aa1.39□□□□□ -2.19
SMC4YLR086W RBA50Q04418 439 aa1.39□□□□□ -2.19
SMC4YLR086W FMP42Q04991 504 aa1.39□□□□□ -2.19
SMC4YLR086W RRP9Q06506 573 aaKnown RBP1.39□□□□□ -2.19
SMC4YLR086W DIB1Q06819 143 aaPredicted RBP1.39□□□□□ -2.19
SMC4YLR086W YDL057WQ07379 328 aa1.39□□□□□ -2.19
SMC4YLR086W SMF3Q12078 473 aaPredicted RBP1.39□□□□□ -2.19
SMC4YLR086W ORT1Q12375 292 aa1.39□□□□□ -2.19
SMC4YLR086W ARG4P04076 463 aaPredicted RBP1.39□□□□□ -2.19
SMC4YLR086W GLN3P18494 730 aa1.39□□□□□ -2.19
SMC4YLR086W MNE1P24720 663 aa1.39□□□□□ -2.19
SMC4YLR086W YCR043CP25361 127 aa1.39□□□□□ -2.19
SMC4YLR086W BEM1P29366 551 aa1.39□□□□□ -2.19
SMC4YLR086W RIM2P38127 377 aa1.39□□□□□ -2.19
SMC4YLR086W TIF5P38431 405 aaKnown RBP1.39□□□□□ -2.19
SMC4YLR086W YJL055WP47044 245 aa1.39□□□□□ -2.19
SMC4YLR086W RTT101P47050 842 aa1.39□□□□□ -2.19
SMC4YLR086W IZH1Q03419 316 aa1.39□□□□□ -2.19
SMC4YLR086W URC2Q04411 772 aa1.39□□□□□ -2.19
SMC4YLR086W SNT309Q06091 175 aaPredicted RBP1.39□□□□□ -2.19
SMC4YLR086W GRS2Q06817 618 aa1.39□□□□□ -2.19
SMC4YLR086W AAD15Q08361 143 aa1.39□□□□□ -2.19
SMC4YLR086W SEC7P11075 2009 aaKnown RBP1.39□□□□□ -2.19
SMC4YLR086W PAB1P04147 577 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SMC4YLR086W RPL12AP0CX53 165 aaKnown RBP1.39□□□□□ -2.19
SMC4YLR086W RPL12BP0CX54 165 aa1.39□□□□□ -2.19
SMC4YLR086W MAS2P11914 482 aa1.39□□□□□ -2.19
SMC4YLR086W DAP2P18962 818 aa1.39□□□□□ -2.19
SMC4YLR086W PPH22P23595 377 aa1.39□□□□□ -2.19
SMC4YLR086W ALG8P40351 577 aa1.39□□□□□ -2.19
SMC4YLR086W ELP2P42935 788 aa1.39□□□□□ -2.19
SMC4YLR086W YIP1P53039 248 aa1.39□□□□□ -2.19
SMC4YLR086W MSO1P53604 210 aaKnown RBP1.39□□□□□ -2.19
SMC4YLR086W HEL2Q05580 639 aaKnown RBP1.39□□□□□ -2.19
SMC4YLR086W RKM5Q12367 367 aa1.39□□□□□ -2.19
SMC4YLR086W TFB5Q3E7C1 72 aaPredicted RBP1.39□□□□□ -2.19
SMC4YLR086W MTF1P14908 341 aaKnown RBP1.38□□□□□ -2.19
SMC4YLR086W SEC62P21825 274 aa1.38□□□□□ -2.19
SMC4YLR086W UBA1P22515 1024 aaKnown RBP1.38□□□□□ -2.19
SMC4YLR086W YUR1P26725 428 aa1.38□□□□□ -2.19
SMC4YLR086W FRE1P32791 686 aa1.38□□□□□ -2.19
SMC4YLR086W YSW1P38280 609 aa1.38□□□□□ -2.19
SMC4YLR086W LYS1P38998 373 aaRIP-Chip data1.38□□□□□ -2.19not detected
SMC4YLR086W XBP1P40489 647 aa1.38□□□□□ -2.19
SMC4YLR086W RET3P53600 189 aa1.38□□□□□ -2.19
SMC4YLR086W YPL107WQ02873 248 aa1.38□□□□□ -2.19
SMC4YLR086W MMT1Q03218 510 aa1.38□□□□□ -2.19
SMC4YLR086W DBP9Q06218 594 aaKnown RBP1.38□□□□□ -2.19
SMC4YLR086W CSR2Q12734 1121 aa1.38□□□□□ -2.19
SMC4YLR086W YBR298C-AQ8TGK4 73 aa1.38□□□□□ -2.19
SMC4YLR086W BCK1Q01389 1478 aa1.38□□□□□ -2.19
SMC4YLR086W NAT1P12945 854 aaKnown RBP1.38□□□□□ -2.19
SMC4YLR086W MSP1P28737 362 aa1.38□□□□□ -2.19
SMC4YLR086W NDC1P32500 655 aa1.38□□□□□ -2.19
SMC4YLR086W SPT10P35208 640 aa1.38□□□□□ -2.19
SMC4YLR086W SOR1P35497 357 aaKnown RBP1.38□□□□□ -2.19
SMC4YLR086W ADH5P38113 351 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms