RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YJR028W	YJR028W	RPL15A	P05748	204 aa	Known RBP	4.21	□□□□□ -1.73
YJR028W	YJR028W	PRP16	P15938	1071 aa	Predicted RBP	4.21	□□□□□ -1.73
YJR028W	YJR028W	ATS1	P31386	333 aa		4.21	□□□□□ -1.73
YJR028W	YJR028W	NDC1	P32500	655 aa		4.21	□□□□□ -1.73
YJR028W	YJR028W	MNL1	P38888	796 aa		4.21	□□□□□ -1.73
YJR028W	YJR028W	ALG8	P40351	577 aa		4.21	□□□□□ -1.73
YJR028W	YJR028W	PAC11	P40960	533 aa		4.21	□□□□□ -1.73
YJR028W	YJR028W	BRO1	P48582	844 aa		4.21	□□□□□ -1.73
YJR028W	YJR028W	PMT5	P52867	743 aa		4.21	□□□□□ -1.73
YJR028W	YJR028W	MGR3	Q04472	501 aa		4.21	□□□□□ -1.73
YJR028W	YJR028W	CDC21	P06785	304 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	TAL1	P15019	335 aa	Known RBP	4.21	□□□□□ -1.74
YJR028W	YJR028W	DAL5	P15365	543 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	PTR2	P32901	601 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	MTC4	P38335	694 aa	Known RBP	4.21	□□□□□ -1.74
YJR028W	YJR028W	MSG5	P38590	489 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	YHR177W	P38867	453 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	SIM1	P40472	476 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	RPR2	P40571	144 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	RPA34	P47006	233 aa	Predicted RBP	4.21	□□□□□ -1.74
YJR028W	YJR028W	RTT101	P47050	842 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	PHB2	P50085	310 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	AQR1	P53943	586 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	YPL068C	Q02749	293 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	MRP51	Q02950	344 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	PRP3	Q03338	469 aa	Predicted RBP	4.21	□□□□□ -1.74
YJR028W	YJR028W	URC2	Q04411	772 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	RRP9	Q06506	573 aa	Known RBP	4.21	□□□□□ -1.74
YJR028W	YJR028W	YAP7	Q08182	245 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	AYT1	Q12226	474 aa		4.21	□□□□□ -1.74
YJR028W	YJR028W	STF1	P01098	86 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	ARG4	P04076	463 aa	Predicted RBP	4.2	□□□□□ -1.74
YJR028W	YJR028W	RPL12A	P0CX53	165 aa	Known RBP	4.2	□□□□□ -1.74
YJR028W	YJR028W	RPL12B	P0CX54	165 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	MTF1	P14908	341 aa	Known RBP	4.2	□□□□□ -1.74
YJR028W	YJR028W	RRP1	P35178	278 aa	Predicted RBP	4.2	□□□□□ -1.74
YJR028W	YJR028W	PMU1	P36069	295 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	MST28	P39552	234 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	POP6	P53218	158 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	RTT102	P53330	157 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	STD1	Q02794	444 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	MMT1	Q03218	510 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	BET5	Q03630	159 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	ECM7	Q06200	448 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	TIM18	Q08749	192 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	RGT2	Q12300	763 aa		4.2	□□□□□ -1.74
YJR028W	YJR028W	DST1	P07273	309 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	ATR1	P13090	542 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	PUT3	P25502	979 aa	Predicted RBP	4.19	□□□□□ -1.74
YJR028W	YJR028W	TOA2	P32774	122 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	RGT1	P32862	1170 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	SUR1	P33300	382 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	YKL097C	P34245	136 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	SPP381	P38282	291 aa	Predicted RBP	4.19	□□□□□ -1.74
YJR028W	YJR028W	BZZ1	P38822	633 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	YER079W	P40052	210 aa	Known RBP	4.19	□□□□□ -1.74
YJR028W	YJR028W	TOS2	P50078	622 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	COS10	P52924	374 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	YPR078C	Q06813	372 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	DAP1	Q12091	152 aa		4.19	□□□□□ -1.74
YJR028W	YJR028W	PKH2	Q12236	1081 aa	Known RBP	4.19	□□□□□ -1.74
YJR028W	YJR028W	TEF1	P02994	458 aa	Known RBP	4.18	□□□□□ -1.74
YJR028W	YJR028W	HEM2	P05373	342 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	OPI3	P05375	206 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	STE3	P06783	470 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	SAG1	P20840	650 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	PSO2	P30620	661 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	SKN1	P33336	771 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	SRB2	P34162	210 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	KAP104	P38217	918 aa	Known RBP	4.18	□□□□□ -1.74
YJR028W	YJR028W	STE24	P47154	453 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	GPI8	P49018	411 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	MPS2	P53159	387 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	ADA2	Q02336	434 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	PIR3	Q03180	325 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	SPH1	Q06160	661 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	HIF1	Q12373	385 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	RAD61	Q99359	647 aa		4.18	□□□□□ -1.74
YJR028W	YJR028W	RPL20A	P0CX23	172 aa	Known RBP	4.17	□□□□□ -1.74
YJR028W	YJR028W	RPL20B	P0CX24	172 aa	Predicted RBP	4.17	□□□□□ -1.74
YJR028W	YJR028W	SAM1	P10659	382 aa	Known RBP	4.17	□□□□□ -1.74
YJR028W	YJR028W	SAM2	P19358	384 aa	Known RBP	4.17	□□□□□ -1.74
YJR028W	YJR028W	YBR137W	P38276	179 aa		4.17	□□□□□ -1.74
YJR028W	YJR028W	RPH1	P39956	796 aa		4.17	□□□□□ -1.74
YJR028W	YJR028W	YJL070C	P40361	888 aa		4.17	□□□□□ -1.74
YJR028W	YJR028W	YIL089W	P40500	205 aa		4.17	□□□□□ -1.74
YJR028W	YJR028W	LAM5	P43560	674 aa		4.17	□□□□□ -1.74
YJR028W	YJR028W	SSN8	P47821	323 aa		4.17	□□□□□ -1.74
YJR028W	YJR028W	MPS1	P54199	764 aa		4.17	□□□□□ -1.74
YJR028W	YJR028W	YOR012W	Q12351	137 aa		4.17	□□□□□ -1.74
YJR028W	YJR028W	YPT53	P36019	220 aa		4.16	□□□□□ -1.74
YJR028W	YJR028W	PCH2	P38126	564 aa		4.16	□□□□□ -1.74
YJR028W	YJR028W	MIX23	P38162	196 aa		4.16	□□□□□ -1.74
YJR028W	YJR028W	LIN1	P38852	340 aa	Predicted RBP	4.16	□□□□□ -1.74
YJR028W	YJR028W	YFR016C	P43597	1233 aa	Known RBP	4.16	□□□□□ -1.74
YJR028W	YJR028W	AAD15	Q08361	143 aa		4.16	□□□□□ -1.74
YJR028W	YJR028W	MUM3	Q08750	479 aa		4.16	□□□□□ -1.74
YJR028W	YJR028W	FAA2	P39518	744 aa		4.15	□□□□□ -1.75
YJR028W	YJR028W	CAF40	P53829	373 aa		4.15	□□□□□ -1.75
YJR028W	YJR028W	YMR181C	Q03231	154 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms