RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C CHL1P22516 861 aaPredicted RBP2.85□□□□□ -1.95
NMD2YHR077C CLB2P24869 491 aa2.85□□□□□ -1.95
NMD2YHR077C CTS1P29029 562 aa2.85□□□□□ -1.95
NMD2YHR077C ARO7P32178 256 aa2.85□□□□□ -1.95
NMD2YHR077C TUL1P36096 758 aa2.85□□□□□ -1.95
NMD2YHR077C GPX2P38143 162 aa2.85□□□□□ -1.95
NMD2YHR077C SIT1P39980 628 aa2.85□□□□□ -1.95
NMD2YHR077C SPF1P39986 1215 aaKnown RBP2.85□□□□□ -1.95
NMD2YHR077C NDE1P40215 560 aa2.85□□□□□ -1.95
NMD2YHR077C POP1P41812 875 aa2.85□□□□□ -1.95
NMD2YHR077C FAR7P43592 221 aa2.85□□□□□ -1.95
NMD2YHR077C YJL055WP47044 245 aa2.85□□□□□ -1.95
NMD2YHR077C HOC1P47124 396 aa2.85□□□□□ -1.95
NMD2YHR077C YGR168CP53293 376 aa2.85□□□□□ -1.95
NMD2YHR077C CPR8P53728 308 aa2.85□□□□□ -1.95
NMD2YHR077C MSC1Q03104 513 aa2.85□□□□□ -1.95
NMD2YHR077C YMR178WQ03219 274 aaKnown RBP2.85□□□□□ -1.95
NMD2YHR077C PFA5Q03289 374 aa2.85□□□□□ -1.95
NMD2YHR077C TRM82Q03774 444 aa2.85□□□□□ -1.95
NMD2YHR077C SWF1Q04629 336 aa2.85□□□□□ -1.95
NMD2YHR077C PUN1Q06991 263 aa2.85□□□□□ -1.95
NMD2YHR077C YLL007CQ07799 665 aa2.85□□□□□ -1.95
NMD2YHR077C NBA1Q08229 501 aaKnown RBP2.85□□□□□ -1.95
NMD2YHR077C MCD1Q12158 566 aa2.85□□□□□ -1.95
NMD2YHR077C MHF1Q3E835 90 aa2.85□□□□□ -1.95
NMD2YHR077C RPS17AP02407 136 aaKnown RBP2.85□□□□□ -1.95
NMD2YHR077C RPS17BP14127 136 aaKnown RBP2.85□□□□□ -1.95
NMD2YHR077C STF2P16965 84 aa2.85□□□□□ -1.95
NMD2YHR077C TAH1P25638 111 aaPredicted RBP2.85□□□□□ -1.95
NMD2YHR077C CLG1P35190 452 aa2.85□□□□□ -1.95
NMD2YHR077C LRP1P38801 184 aaKnown RBP2.85□□□□□ -1.95
NMD2YHR077C TAT2P38967 592 aa2.85□□□□□ -1.95
NMD2YHR077C PLB1P39105 664 aa2.85□□□□□ -1.95
NMD2YHR077C SOK1P40317 901 aa2.85□□□□□ -1.95
NMD2YHR077C TED1P40533 473 aa2.85□□□□□ -1.95
NMD2YHR077C LSB3P43603 459 aaKnown RBP2.85□□□□□ -1.95
NMD2YHR077C CWC23P52868 283 aaPredicted RBP2.85□□□□□ -1.95
NMD2YHR077C COS12P53053 380 aa2.85□□□□□ -1.95
NMD2YHR077C RAI1P53063 387 aaKnown RBP2.85□□□□□ -1.95
NMD2YHR077C MRH4P53166 561 aa2.85□□□□□ -1.95
NMD2YHR077C YHM2Q04013 314 aa2.85□□□□□ -1.95
NMD2YHR077C YMR310CQ04867 317 aaPredicted RBP2.85□□□□□ -1.95
NMD2YHR077C RNH202Q05635 350 aa2.85□□□□□ -1.95
NMD2YHR077C SPO77Q06134 477 aa2.85□□□□□ -1.95
NMD2YHR077C YPS7Q06325 596 aa2.85□□□□□ -1.95
NMD2YHR077C VPS68Q12016 184 aa2.85□□□□□ -1.95
NMD2YHR077C TGL5Q12043 749 aa2.85□□□□□ -1.95
NMD2YHR077C SIA1Q12212 622 aa2.85□□□□□ -1.95
NMD2YHR077C RGT2Q12300 763 aa2.85□□□□□ -1.95
NMD2YHR077C HOM2P13663 365 aaKnown RBP2.84□□□□□ -1.95
NMD2YHR077C MER1P16523 270 aa2.84□□□□□ -1.95
NMD2YHR077C THR1P17423 357 aaKnown RBP2.84□□□□□ -1.95
NMD2YHR077C GRR1P24814 1151 aa2.84□□□□□ -1.95
NMD2YHR077C RPF2P36160 344 aaKnown RBP2.84□□□□□ -1.95
NMD2YHR077C SCO2P38072 301 aa2.84□□□□□ -1.95
NMD2YHR077C RGA1P39083 1007 aa2.84□□□□□ -1.95
NMD2YHR077C LSM5P40089 93 aaKnown RBP2.84□□□□□ -1.95
NMD2YHR077C YNL195CP40168 261 aa2.84□□□□□ -1.95
NMD2YHR077C MOB1P40484 314 aa2.84□□□□□ -1.95
NMD2YHR077C HXT16P47185 567 aa2.84□□□□□ -1.95
NMD2YHR077C MPC1P53157 130 aaKnown RBP2.84□□□□□ -1.95
NMD2YHR077C RTS3P53289 263 aa2.84□□□□□ -1.95
NMD2YHR077C AQR1P53943 586 aa2.84□□□□□ -1.95
NMD2YHR077C SMA1Q02651 245 aa2.84□□□□□ -1.95
NMD2YHR077C MED2Q12124 431 aa2.84□□□□□ -1.95
NMD2YHR077C ACF2Q12168 779 aa2.84□□□□□ -1.95
NMD2YHR077C PNS1Q12412 539 aa2.84□□□□□ -1.95
NMD2YHR077C YLR111WQ12528 110 aa2.84□□□□□ -1.95
NMD2YHR077C NAG1Q8TGN9 163 aa2.84□□□□□ -1.95
NMD2YHR077C FAB1P34756 2278 aa2.84□□□□□ -1.95
NMD2YHR077C CPA1P07258 411 aaKnown RBP2.84□□□□□ -1.96
NMD2YHR077C PRP2P20095 876 aaPredicted RBP2.84□□□□□ -1.96
NMD2YHR077C RAM1P22007 431 aa2.84□□□□□ -1.96
NMD2YHR077C GIT1P25346 518 aa2.84□□□□□ -1.96
NMD2YHR077C RPS5P26783 225 aaKnown RBP2.84□□□□□ -1.96
NMD2YHR077C NTH1P32356 751 aa2.84□□□□□ -1.96
NMD2YHR077C NRP1P32770 719 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
NMD2YHR077C NPL6P32832 435 aa2.84□□□□□ -1.96
NMD2YHR077C MNN2P38069 597 aa2.84□□□□□ -1.96
NMD2YHR077C SRO77P38163 1010 aa2.84□□□□□ -1.96
NMD2YHR077C TAE1P38340 232 aa2.84□□□□□ -1.96
NMD2YHR077C MET30P39014 640 aa2.84□□□□□ -1.96
NMD2YHR077C CEM1P39525 442 aa2.84□□□□□ -1.96
NMD2YHR077C BOL3P39724 118 aa2.84□□□□□ -1.96
NMD2YHR077C YEL068CP39977 110 aa2.84□□□□□ -1.96
NMD2YHR077C GID8P40208 455 aa2.84□□□□□ -1.96
NMD2YHR077C TY4A-JP47023 414 aa2.84□□□□□ -1.96
NMD2YHR077C SHE4P51534 789 aa2.84□□□□□ -1.96
NMD2YHR077C CDH1P53197 566 aa2.84□□□□□ -1.96
NMD2YHR077C OAZ1Q02803 292 aa2.84□□□□□ -1.96
NMD2YHR077C MRPL35Q06678 367 aa2.84□□□□□ -1.96
NMD2YHR077C ATG29Q12092 213 aa2.84□□□□□ -1.96
NMD2YHR077C WSC3Q12215 556 aa2.84□□□□□ -1.96
NMD2YHR077C SUL2Q12325 893 aa2.84□□□□□ -1.96
NMD2YHR077C MRX4Q12467 430 aa2.84□□□□□ -1.96
NMD2YHR077C MF(ALPHA)1P01149 165 aa2.83□□□□□ -1.96
NMD2YHR077C RNQ1P25367 405 aa2.83□□□□□ -1.96
NMD2YHR077C SPT14P32363 452 aa2.83□□□□□ -1.96
NMD2YHR077C PRP19P32523 503 aaKnown RBP2.83□□□□□ -1.96
NMD2YHR077C LOT5P34234 306 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms