RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W MSG5P38590 489 aa1.31□□□□□ -2.2
CDC36YDL165W RCK2P38623 610 aa1.31□□□□□ -2.2
CDC36YDL165W YAP3P38749 330 aa1.31□□□□□ -2.2
CDC36YDL165W LRP1P38801 184 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W TDA11P38854 504 aa1.31□□□□□ -2.2
CDC36YDL165W SUR2P38992 349 aa1.31□□□□□ -2.2
CDC36YDL165W HAT2P39984 401 aa1.31□□□□□ -2.2
CDC36YDL165W THO1P40040 218 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W SER3P40054 469 aa1.31□□□□□ -2.2
CDC36YDL165W YER137CP40083 148 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W YER186CP40101 306 aa1.31□□□□□ -2.2
CDC36YDL165W SLM1P40485 686 aa1.31□□□□□ -2.2
CDC36YDL165W UTP25P40498 721 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W YRB2P40517 327 aa1.31□□□□□ -2.2
CDC36YDL165W GVP36P40531 326 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W SNL1P40548 159 aa1.31□□□□□ -2.2
CDC36YDL165W CIN5P40917 295 aa1.31□□□□□ -2.2
CDC36YDL165W UFE1P41834 346 aa1.31□□□□□ -2.2
CDC36YDL165W GPD2P41911 440 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W ZIM17P42844 174 aa1.31□□□□□ -2.2
CDC36YDL165W EPL1P43572 832 aa1.31□□□□□ -2.2
CDC36YDL165W BNA6P43619 295 aa1.31□□□□□ -2.2
CDC36YDL165W RPS10BP46784 105 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W CTK3P46963 296 aaPredicted RBP1.31□□□□□ -2.2
CDC36YDL165W LSM1P47017 172 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W YJL055WP47044 245 aa1.31□□□□□ -2.2
CDC36YDL165W COX16P47081 118 aa1.31□□□□□ -2.2
CDC36YDL165W PYK2P52489 506 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W YNL146WP53906 100 aa1.31□□□□□ -2.2
CDC36YDL165W NCS2P53923 493 aaPredicted RBP1.31□□□□□ -2.2
CDC36YDL165W HEF3P53978 1044 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W RHO4Q00246 291 aa1.31□□□□□ -2.2
CDC36YDL165W YSA1Q01976 231 aa1.31□□□□□ -2.2
CDC36YDL165W RPL6AQ02326 176 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W NGL3Q03210 505 aa1.31□□□□□ -2.2
CDC36YDL165W HOT1Q03213 719 aa1.31□□□□□ -2.2
CDC36YDL165W ABZ2Q03266 374 aa1.31□□□□□ -2.2
CDC36YDL165W YMR160WQ03823 816 aa1.31□□□□□ -2.2
CDC36YDL165W GYL1Q04322 720 aa1.31□□□□□ -2.2
CDC36YDL165W SPC24Q04477 213 aa1.31□□□□□ -2.2
CDC36YDL165W YDR286CQ05530 114 aa1.31□□□□□ -2.2
CDC36YDL165W STE23Q06010 1027 aa1.31□□□□□ -2.2
CDC36YDL165W NDE2Q07500 545 aa1.31□□□□□ -2.2
CDC36YDL165W YDR056CQ12025 205 aa1.31□□□□□ -2.2
CDC36YDL165W DAS2Q12084 232 aa1.31□□□□□ -2.2
CDC36YDL165W REX3Q12090 404 aa1.31□□□□□ -2.2
CDC36YDL165W BBP1Q12365 385 aa1.31□□□□□ -2.2
CDC36YDL165W NCA2Q12374 616 aa1.31□□□□□ -2.2
CDC36YDL165W AHC1Q12433 566 aa1.31□□□□□ -2.2
CDC36YDL165W CMC2Q3E7A4 109 aa1.31□□□□□ -2.2
CDC36YDL165W LAG2Q92325 660 aa1.31□□□□□ -2.2
CDC36YDL165W SRN2Q99176 213 aa1.31□□□□□ -2.2
CDC36YDL165W YOS9Q99220 542 aa1.31□□□□□ -2.2
CDC36YDL165W SEY1Q99287 776 aa1.31□□□□□ -2.2
CDC36YDL165W DRS2P39524 1355 aa1.31□□□□□ -2.2
CDC36YDL165W SRB8P25648 1427 aa1.31□□□□□ -2.2
CDC36YDL165W TSC11P40061 1430 aa1.31□□□□□ -2.2
CDC36YDL165W BUD4P47136 1447 aa1.31□□□□□ -2.2
CDC36YDL165W HIS4P00815 799 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W CBP2P03874 630 aaPredicted RBP1.3□□□□□ -2.2
CDC36YDL165W HXK2P04807 486 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W PUT4P15380 627 aa1.3□□□□□ -2.2
CDC36YDL165W FUS3P16892 353 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W CKA2P19454 339 aa1.3□□□□□ -2.2
CDC36YDL165W DBP3P20447 523 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W BUD23P25627 275 aaPredicted RBP1.3□□□□□ -2.2
CDC36YDL165W HMX1P32339 317 aa1.3□□□□□ -2.2
CDC36YDL165W PDB1P32473 366 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W CYM1P32898 989 aa1.3□□□□□ -2.2
CDC36YDL165W VAM7P32912 316 aa1.3□□□□□ -2.2
CDC36YDL165W VPS21P36017 210 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W UBP11P36026 717 aa1.3□□□□□ -2.2
CDC36YDL165W MRPL10P36520 322 aa1.3□□□□□ -2.2
CDC36YDL165W MRPL17P36528 281 aa1.3□□□□□ -2.2
CDC36YDL165W MRX3P38172 270 aa1.3□□□□□ -2.2
CDC36YDL165W KAP104P38217 918 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W YBR225WP38321 900 aa1.3□□□□□ -2.2
CDC36YDL165W SMF2P38778 549 aa1.3□□□□□ -2.2
CDC36YDL165W LSM12P38828 187 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W UTP9P38882 575 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W YER184CP39961 794 aa1.3□□□□□ -2.2
CDC36YDL165W EDC3P39998 551 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W GIM4P40005 111 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W NDE1P40215 560 aa1.3□□□□□ -2.2
CDC36YDL165W TMA108P40462 946 aa1.3□□□□□ -2.2
CDC36YDL165W ARF3P40994 183 aaRIP-Chip data1.3□□□□□ -2.2not detected
CDC36YDL165W ELP2P42935 788 aa1.3□□□□□ -2.2
CDC36YDL165W LOC1P43586 204 aaPredicted RBP1.3□□□□□ -2.2
CDC36YDL165W TRS85P46944 698 aa1.3□□□□□ -2.2
CDC36YDL165W TMA22P47089 198 aaPredicted RBP1.3□□□□□ -2.2
CDC36YDL165W LIA1P47120 325 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W BRO1P48582 844 aa1.3□□□□□ -2.2
CDC36YDL165W FMS1P50264 508 aa1.3□□□□□ -2.2
CDC36YDL165W DSD1P53095 428 aa1.3□□□□□ -2.2
CDC36YDL165W MLC1P53141 149 aa1.3□□□□□ -2.2
CDC36YDL165W RPN14P53196 417 aa1.3□□□□□ -2.2
CDC36YDL165W COS6P53344 381 aa1.3□□□□□ -2.2
CDC36YDL165W ERV25P54837 211 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W PRO2P54885 456 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W IRC4Q03036 179 aa1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms