RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C YGK3Q12222 375 aaPredicted RBP2.15□□□□□ -2.06
ASM4YDL088C RPB5P20434 215 aa2.15□□□□□ -2.07
ASM4YDL088C CYS4P32582 507 aaKnown RBP2.15□□□□□ -2.07
ASM4YDL088C YBR056WP38081 501 aa2.15□□□□□ -2.07
ASM4YDL088C BAT1P38891 393 aaKnown RBP2.15□□□□□ -2.07
ASM4YDL088C SMF1P38925 575 aa2.15□□□□□ -2.07
ASM4YDL088C HAC1P41546 238 aa2.15□□□□□ -2.07
ASM4YDL088C ALF1P53904 254 aa2.15□□□□□ -2.07
ASM4YDL088C SUB1P54000 292 aaKnown RBP2.15□□□□□ -2.07
ASM4YDL088C YET2Q04210 160 aa2.15□□□□□ -2.07
ASM4YDL088C RTN1Q04947 295 aaKnown RBP2.15□□□□□ -2.07
ASM4YDL088C MCH1Q07376 486 aa2.15□□□□□ -2.07
ASM4YDL088C PRM7Q12459 698 aa2.15□□□□□ -2.07
ASM4YDL088C YCL068CP25593 260 aa2.14□□□□□ -2.07
ASM4YDL088C KRE2P27809 442 aa2.14□□□□□ -2.07
ASM4YDL088C RRP1P35178 278 aaPredicted RBP2.14□□□□□ -2.07
ASM4YDL088C SOR1P35497 357 aaKnown RBP2.14□□□□□ -2.07
ASM4YDL088C APE3P37302 537 aaKnown RBP2.14□□□□□ -2.07
ASM4YDL088C UTP9P38882 575 aaKnown RBP2.14□□□□□ -2.07
ASM4YDL088C CCE1Q03702 353 aa2.14□□□□□ -2.07
ASM4YDL088C RRP45Q05636 305 aaKnown RBP2.14□□□□□ -2.07
ASM4YDL088C MDM30Q05930 598 aa2.14□□□□□ -2.07
ASM4YDL088C SOR2Q07786 357 aa2.14□□□□□ -2.07
ASM4YDL088C SRL2Q12020 392 aa2.14□□□□□ -2.07
ASM4YDL088C YPS3Q12303 508 aa2.14□□□□□ -2.07
ASM4YDL088C CDC50P25656 391 aa2.13□□□□□ -2.07
ASM4YDL088C IMP2'P32351 346 aa2.13□□□□□ -2.07
ASM4YDL088C GPI18P38211 433 aa2.13□□□□□ -2.07
ASM4YDL088C NTC20P38302 140 aaPredicted RBP2.13□□□□□ -2.07
ASM4YDL088C OM14P38325 134 aa2.13□□□□□ -2.07
ASM4YDL088C MAM33P40513 266 aa2.13□□□□□ -2.07
ASM4YDL088C EGT2P42835 1041 aa2.13□□□□□ -2.07
ASM4YDL088C DLD2P46681 530 aaKnown RBP2.13□□□□□ -2.07
ASM4YDL088C TAF12Q03761 539 aa2.13□□□□□ -2.07
ASM4YDL088C CMS1Q07897 291 aaKnown RBP2.13□□□□□ -2.07
ASM4YDL088C VAM3Q12241 283 aa2.13□□□□□ -2.07
ASM4YDL088C TPT1Q12272 230 aaKnown RBP2.13□□□□□ -2.07
ASM4YDL088C GRX6Q12438 231 aa2.13□□□□□ -2.07
ASM4YDL088C MET17P06106 444 aa2.12□□□□□ -2.07
ASM4YDL088C CBP6P07253 162 aaPredicted RBP2.12□□□□□ -2.07
ASM4YDL088C HOM3P10869 527 aa2.12□□□□□ -2.07
ASM4YDL088C TFB1P32776 642 aa2.12□□□□□ -2.07
ASM4YDL088C YAL037WP39728 267 aa2.12□□□□□ -2.07
ASM4YDL088C YPS5P53057 165 aa2.12□□□□□ -2.07
ASM4YDL088C MST27P53176 234 aa2.12□□□□□ -2.07
ASM4YDL088C KTR6P54070 446 aa2.12□□□□□ -2.07
ASM4YDL088C RAX1Q08760 435 aa2.12□□□□□ -2.07
ASM4YDL088C SEC9P40357 651 aa2.11□□□□□ -2.07
ASM4YDL088C LCB3P47013 409 aa2.11□□□□□ -2.07
ASM4YDL088C AIM24P47127 394 aa2.11□□□□□ -2.07
ASM4YDL088C YPL107WQ02873 248 aa2.11□□□□□ -2.07
ASM4YDL088C SVL3Q03088 825 aaKnown RBP2.11□□□□□ -2.07
ASM4YDL088C SMC5Q08204 1093 aa2.11□□□□□ -2.07
ASM4YDL088C FOL3Q12676 427 aaPredicted RBP2.11□□□□□ -2.07
ASM4YDL088C BI3Q9ZZW7 517 aa2.11□□□□□ -2.07
ASM4YDL088C ADH1P00330 348 aaKnown RBP2.1□□□□□ -2.07
ASM4YDL088C SWE1P32944 819 aa2.1□□□□□ -2.07
ASM4YDL088C BMT2P38278 337 aa2.1□□□□□ -2.07
ASM4YDL088C ATG18P43601 500 aa2.1□□□□□ -2.07
ASM4YDL088C PHO86P46956 311 aa2.1□□□□□ -2.07
ASM4YDL088C BNS1P50084 137 aa2.1□□□□□ -2.07
ASM4YDL088C YGL262WP53054 175 aa2.1□□□□□ -2.07
ASM4YDL088C YGL138CP53122 345 aa2.1□□□□□ -2.07
ASM4YDL088C YGR018CP53211 109 aa2.1□□□□□ -2.07
ASM4YDL088C RPA49Q01080 415 aaPredicted RBP2.1□□□□□ -2.07
ASM4YDL088C VPS72Q03388 795 aa2.1□□□□□ -2.07
ASM4YDL088C EAF3Q12432 401 aa2.1□□□□□ -2.07
ASM4YDL088C NAG1Q8TGN9 163 aa2.1□□□□□ -2.07
ASM4YDL088C MRP7P12687 371 aa2.1□□□□□ -2.07
ASM4YDL088C CKA1P15790 372 aa2.1□□□□□ -2.07
ASM4YDL088C CLC1P17891 233 aa2.1□□□□□ -2.07
ASM4YDL088C PHA2P32452 334 aa2.1□□□□□ -2.07
ASM4YDL088C ATP3P38077 311 aaKnown RBP2.1□□□□□ -2.07
ASM4YDL088C NAB3P38996 802 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
ASM4YDL088C YNL208WP40159 199 aaKnown RBP2.1□□□□□ -2.07
ASM4YDL088C COS5P47187 383 aa2.1□□□□□ -2.07
ASM4YDL088C YIP5P53108 310 aa2.1□□□□□ -2.07
ASM4YDL088C TPS1Q00764 495 aaKnown RBP2.1□□□□□ -2.07
ASM4YDL088C YMR102CQ03177 834 aa2.1□□□□□ -2.07
ASM4YDL088C MDM36Q06820 579 aa2.1□□□□□ -2.07
ASM4YDL088C COS7Q07788 383 aa2.1□□□□□ -2.07
ASM4YDL088C SCEIP03882 235 aa2.09□□□□□ -2.08
ASM4YDL088C FMT1P32785 401 aa2.09□□□□□ -2.08
ASM4YDL088C RRN10P38204 145 aa2.09□□□□□ -2.08
ASM4YDL088C MMS4P38257 691 aa2.09□□□□□ -2.08
ASM4YDL088C YFL012WP43580 148 aa2.09□□□□□ -2.08
ASM4YDL088C CLD1P53264 445 aa2.09□□□□□ -2.08
ASM4YDL088C RKM1Q08961 583 aaPredicted RBP2.09□□□□□ -2.08
ASM4YDL088C MED1Q12321 566 aa2.09□□□□□ -2.08
ASM4YDL088C CLB3P24870 427 aa2.08□□□□□ -2.08
ASM4YDL088C ROX1P25042 368 aa2.08□□□□□ -2.08
ASM4YDL088C DPH2P32461 534 aa2.08□□□□□ -2.08
ASM4YDL088C RRP4P38792 359 aaKnown RBP2.08□□□□□ -2.08
ASM4YDL088C YER184CP39961 794 aa2.08□□□□□ -2.08
ASM4YDL088C BUG1Q12191 341 aa2.08□□□□□ -2.08
ASM4YDL088C ATG34Q12292 412 aa2.08□□□□□ -2.08
ASM4YDL088C DPH5P32469 300 aaPredicted RBP2.07□□□□□ -2.08
ASM4YDL088C COX13P32799 129 aa2.07□□□□□ -2.08
ASM4YDL088C SAS3P34218 831 aa2.07□□□□□ -2.08
ASM4YDL088C IGO1P53897 168 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms