RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C SGT1Q08446 395 aa2.93□□□□□ -1.94
RPC40YPR110C DCI1Q08558 271 aa2.93□□□□□ -1.94
RPC40YPR110C AEP3Q12089 606 aa2.93□□□□□ -1.94
RPC40YPR110C RPN5Q12250 445 aaKnown RBP2.93□□□□□ -1.94
RPC40YPR110C BPT1P14772 1559 aa2.92□□□□□ -1.94
RPC40YPR110C SCC2Q04002 1493 aa2.92□□□□□ -1.94
RPC40YPR110C RPI1P23250 407 aaKnown RBP2.92□□□□□ -1.94
RPC40YPR110C TIP1P27654 210 aaPredicted RBP2.92□□□□□ -1.94
RPC40YPR110C HEL1P36113 551 aa2.92□□□□□ -1.94
RPC40YPR110C RRN10P38204 145 aa2.92□□□□□ -1.94
RPC40YPR110C ZTA1P38230 334 aaKnown RBP2.92□□□□□ -1.94
RPC40YPR110C PCA1P38360 1216 aa2.92□□□□□ -1.94
RPC40YPR110C MDM31P38880 579 aa2.92□□□□□ -1.94
RPC40YPR110C LYS1P38998 373 aaRIP-Chip data2.92□□□□□ -1.94not detected
RPC40YPR110C YAT2P40017 923 aa2.92□□□□□ -1.94
RPC40YPR110C YPS6P40583 537 aa2.92□□□□□ -1.94
RPC40YPR110C LCB2P40970 561 aa2.92□□□□□ -1.94
RPC40YPR110C YFR016CP43597 1233 aaKnown RBP2.92□□□□□ -1.94
RPC40YPR110C YJL055WP47044 245 aa2.92□□□□□ -1.94
RPC40YPR110C CRZ1P53968 678 aa2.92□□□□□ -1.94
RPC40YPR110C MRP51Q02950 344 aa2.92□□□□□ -1.94
RPC40YPR110C PRP42Q03776 544 aaKnown RBP2.92□□□□□ -1.94
RPC40YPR110C GYL1Q04322 720 aa2.92□□□□□ -1.94
RPC40YPR110C YDR341CQ05506 607 aaKnown RBP2.92□□□□□ -1.94
RPC40YPR110C SKI7Q08491 747 aaPredicted RBP2.92□□□□□ -1.94
RPC40YPR110C RUP1Q12242 671 aa2.92□□□□□ -1.94
RPC40YPR110C ORT1Q12375 292 aa2.92□□□□□ -1.94
RPC40YPR110C RMD5Q12508 421 aa2.92□□□□□ -1.94
RPC40YPR110C SET6Q12529 373 aa2.92□□□□□ -1.94
RPC40YPR110C TY2B-LR1P0C2J3 1770 aa2.92□□□□□ -1.94
RPC40YPR110C TY2B-FP0CX63 1770 aa2.92□□□□□ -1.94
RPC40YPR110C TY2B-GR2P0CX64 1770 aa2.92□□□□□ -1.94
RPC40YPR110C TY2B-CP25384 1770 aa2.92□□□□□ -1.94
RPC40YPR110C TY2B-DR2Q03494 1770 aa2.92□□□□□ -1.94
RPC40YPR110C TY1B-DR1Q03855 1755 aa2.92□□□□□ -1.94
RPC40YPR110C TY2B-DR3Q07791 1770 aaKnown RBP2.92□□□□□ -1.94
RPC40YPR110C TY2B-OR1Q12113 1770 aa2.92□□□□□ -1.94
RPC40YPR110C TY2B-DR1Q12472 1770 aa2.92□□□□□ -1.94
RPC40YPR110C TY2B-OR2Q12501 1770 aa2.92□□□□□ -1.94
RPC40YPR110C TY1B-AO13527 1196 aaKnown RBP2.91□□□□□ -1.94
RPC40YPR110C HEM2P05373 342 aa2.91□□□□□ -1.94
RPC40YPR110C MCK1P21965 375 aaKnown RBP2.91□□□□□ -1.94
RPC40YPR110C RRP7P25368 297 aaPredicted RBP2.91□□□□□ -1.94
RPC40YPR110C OLA1P38219 394 aaKnown RBP2.91□□□□□ -1.94
RPC40YPR110C SEC28P40509 296 aaKnown RBP2.91□□□□□ -1.94
RPC40YPR110C SSN8P47821 323 aa2.91□□□□□ -1.94
RPC40YPR110C POP6P53218 158 aa2.91□□□□□ -1.94
RPC40YPR110C YNR048WP53740 393 aa2.91□□□□□ -1.94
RPC40YPR110C OCA2P53949 197 aa2.91□□□□□ -1.94
RPC40YPR110C ERO1Q03103 563 aa2.91□□□□□ -1.94
RPC40YPR110C URH1Q04179 340 aa2.91□□□□□ -1.94
RPC40YPR110C MUM3Q08750 479 aa2.91□□□□□ -1.94
RPC40YPR110C SKS1Q12505 502 aa2.91□□□□□ -1.94
RPC40YPR110C YBR298C-AQ8TGK4 73 aa2.91□□□□□ -1.94
RPC40YPR110C RKR1Q04781 1562 aa2.91□□□□□ -1.94
RPC40YPR110C POL1P13382 1468 aa2.9□□□□□ -1.94
RPC40YPR110C ILV5P06168 395 aaKnown RBP2.9□□□□□ -1.95
RPC40YPR110C PMR1P13586 950 aa2.9□□□□□ -1.95
RPC40YPR110C LSB5P25369 354 aa2.9□□□□□ -1.95
RPC40YPR110C SWI3P32591 825 aa2.9□□□□□ -1.95
RPC40YPR110C RXT2P38255 430 aa2.9□□□□□ -1.95
RPC40YPR110C RRP4P38792 359 aaKnown RBP2.9□□□□□ -1.95
RPC40YPR110C APE4P38821 490 aa2.9□□□□□ -1.95
RPC40YPR110C MST28P39552 234 aa2.9□□□□□ -1.95
RPC40YPR110C GAT2P40209 560 aa2.9□□□□□ -1.95
RPC40YPR110C EFM4P40516 257 aa2.9□□□□□ -1.95
RPC40YPR110C YJL213WP40896 331 aa2.9□□□□□ -1.95
RPC40YPR110C IDP2P41939 412 aa2.9□□□□□ -1.95
RPC40YPR110C CAF40P53829 373 aa2.9□□□□□ -1.95
RPC40YPR110C GPI15P53961 229 aa2.9□□□□□ -1.95
RPC40YPR110C PEX25Q02969 394 aa2.9□□□□□ -1.95
RPC40YPR110C PIR3Q03180 325 aa2.9□□□□□ -1.95
RPC40YPR110C NDL1Q06568 189 aa2.9□□□□□ -1.95
RPC40YPR110C REX4Q08237 289 aa2.9□□□□□ -1.95
RPC40YPR110C PPT2Q12036 173 aa2.9□□□□□ -1.95
RPC40YPR110C PKH2Q12236 1081 aaKnown RBP2.9□□□□□ -1.95
RPC40YPR110C ATG34Q12292 412 aa2.9□□□□□ -1.95
RPC40YPR110C RPO31P04051 1460 aa2.9□□□□□ -1.95
RPC40YPR110C UFD4P33202 1483 aa2.9□□□□□ -1.95
RPC40YPR110C TY1B-DR3Q99231 1755 aa2.89□□□□□ -1.95
RPC40YPR110C YCF1P39109 1515 aaKnown RBP2.89□□□□□ -1.95
RPC40YPR110C ARG4P04076 463 aaPredicted RBP2.89□□□□□ -1.95
RPC40YPR110C GDH1P07262 454 aaKnown RBP2.89□□□□□ -1.95
RPC40YPR110C YUR1P26725 428 aa2.89□□□□□ -1.95
RPC40YPR110C ITR1P30605 584 aa2.89□□□□□ -1.95
RPC40YPR110C PRO3P32263 286 aaKnown RBP2.89□□□□□ -1.95
RPC40YPR110C MIX23P38162 196 aa2.89□□□□□ -1.95
RPC40YPR110C STN1P38960 494 aa2.89□□□□□ -1.95
RPC40YPR110C HMS2P47175 358 aa2.89□□□□□ -1.95
RPC40YPR110C MSO1P53604 210 aaKnown RBP2.89□□□□□ -1.95
RPC40YPR110C FRE4P53746 719 aa2.89□□□□□ -1.95
RPC40YPR110C GIP3Q03016 1276 aa2.89□□□□□ -1.95
RPC40YPR110C YMR181CQ03231 154 aa2.89□□□□□ -1.95
RPC40YPR110C RSN1Q03516 953 aa2.89□□□□□ -1.95
RPC40YPR110C SNT309Q06091 175 aaPredicted RBP2.89□□□□□ -1.95
RPC40YPR110C NSE1Q07913 336 aa2.89□□□□□ -1.95
RPC40YPR110C TIM18Q08749 192 aa2.89□□□□□ -1.95
RPC40YPR110C YPR022CQ12139 1133 aa2.89□□□□□ -1.95
RPC40YPR110C YMR230W-AQ3E7B5 62 aa2.89□□□□□ -1.95
RPC40YPR110C RAD61Q99359 647 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms