RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W YIL067CP40514 678 aa1.11□□□□□ -2.23
SMC1YFL008W TFG2P41896 400 aaPredicted RBP1.11□□□□□ -2.23
SMC1YFL008W ADA2Q02336 434 aa1.11□□□□□ -2.23
SMC1YFL008W THP1Q08231 455 aa1.11□□□□□ -2.23
SMC1YFL008W ORT1Q12375 292 aa1.11□□□□□ -2.23
SMC1YFL008W YBR126W-AQ8TGU7 68 aa1.11□□□□□ -2.23
SMC1YFL008W RAD61Q99359 647 aa1.11□□□□□ -2.23
SMC1YFL008W CCH1P50077 2039 aa1.11□□□□□ -2.23
SMC1YFL008W BEM2P39960 2167 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W MET17P06106 444 aa1.11□□□□□ -2.23
SMC1YFL008W CBS2P14905 389 aa1.11□□□□□ -2.23
SMC1YFL008W FUN19P28003 413 aaPredicted RBP1.11□□□□□ -2.23
SMC1YFL008W DED81P38707 554 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W PTH1P38876 190 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W SER3P40054 469 aa1.11□□□□□ -2.23
SMC1YFL008W VRG4P40107 337 aa1.11□□□□□ -2.23
SMC1YFL008W YPS6P40583 537 aa1.11□□□□□ -2.23
SMC1YFL008W BNS1P50084 137 aa1.11□□□□□ -2.23
SMC1YFL008W TAN1P53072 289 aaPredicted RBP1.11□□□□□ -2.23
SMC1YFL008W ZPR1P53303 486 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W RRN9P53437 365 aa1.11□□□□□ -2.23
SMC1YFL008W SHR3Q02774 210 aa1.11□□□□□ -2.23
SMC1YFL008W PIN3Q06449 215 aa1.11□□□□□ -2.23
SMC1YFL008W YOR387CQ08910 206 aa1.11□□□□□ -2.23
SMC1YFL008W YOL085CQ99345 113 aa1.11□□□□□ -2.23
SMC1YFL008W RPL20AP0CX23 172 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W RPL20BP0CX24 172 aaPredicted RBP1.11□□□□□ -2.23
SMC1YFL008W CHA1P25379 360 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W SPB1P25582 841 aaPredicted RBP1.11□□□□□ -2.23
SMC1YFL008W NOP4P37838 685 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W STP2P38704 541 aa1.11□□□□□ -2.23
SMC1YFL008W JLP2P40206 208 aa1.11□□□□□ -2.23
SMC1YFL008W VTC2P43585 828 aa1.11□□□□□ -2.23
SMC1YFL008W OCA1P50946 238 aaPredicted RBP1.11□□□□□ -2.23
SMC1YFL008W YGL242CP53066 181 aa1.11□□□□□ -2.23
SMC1YFL008W YGR018CP53211 109 aa1.11□□□□□ -2.23
SMC1YFL008W TWF1P53250 332 aa1.11□□□□□ -2.23
SMC1YFL008W ODC1Q03028 310 aa1.11□□□□□ -2.23
SMC1YFL008W SMA2Q04658 369 aa1.11□□□□□ -2.23
SMC1YFL008W ECM30Q06673 1274 aa1.11□□□□□ -2.23
SMC1YFL008W THP3Q12049 470 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W AVL9Q12500 764 aa1.11□□□□□ -2.23
SMC1YFL008W RPB8P20436 146 aa1.1□□□□□ -2.23
SMC1YFL008W GCD7P32502 381 aaPredicted RBP1.1□□□□□ -2.23
SMC1YFL008W SWH1P35845 1188 aa1.1□□□□□ -2.23
SMC1YFL008W ANR2P36090 516 aaPredicted RBP1.1□□□□□ -2.23
SMC1YFL008W ROT2P38138 954 aa1.1□□□□□ -2.23
SMC1YFL008W AFG3P39925 761 aa1.1□□□□□ -2.23
SMC1YFL008W ALG5P40350 334 aa1.1□□□□□ -2.23
SMC1YFL008W IPI3P53877 555 aa1.1□□□□□ -2.23
SMC1YFL008W SPT15P13393 240 aaKnown RBP1.1□□□□□ -2.23
SMC1YFL008W CMC1P36064 111 aa1.1□□□□□ -2.23
SMC1YFL008W YAL037WP39728 267 aa1.1□□□□□ -2.23
SMC1YFL008W SHO1P40073 367 aa1.1□□□□□ -2.23
SMC1YFL008W NDE1P40215 560 aa1.1□□□□□ -2.23
SMC1YFL008W YGR126WP53274 230 aa1.1□□□□□ -2.23
SMC1YFL008W WSC2P53832 503 aa1.1□□□□□ -2.23
SMC1YFL008W TMC1Q08422 150 aaPredicted RBP1.1□□□□□ -2.23
SMC1YFL008W RDR1Q08904 546 aa1.1□□□□□ -2.23
SMC1YFL008W APL4Q12028 832 aa1.1□□□□□ -2.23
SMC1YFL008W PPT2Q12036 173 aa1.1□□□□□ -2.23
SMC1YFL008W SPO12P17123 173 aa1.1□□□□□ -2.23
SMC1YFL008W CLC1P17891 233 aa1.1□□□□□ -2.23
SMC1YFL008W RPS0AP32905 252 aaKnown RBP1.1□□□□□ -2.23
SMC1YFL008W MRPL36P36531 177 aa1.1□□□□□ -2.23
SMC1YFL008W ASC1P38011 319 aaKnown RBP1.1□□□□□ -2.23
SMC1YFL008W SCO2P38072 301 aa1.1□□□□□ -2.23
SMC1YFL008W YNR048WP53740 393 aa1.1□□□□□ -2.23
SMC1YFL008W URH1Q04179 340 aa1.1□□□□□ -2.23
SMC1YFL008W TOP1P04786 769 aa1.09□□□□□ -2.23
SMC1YFL008W CDC31P06704 161 aaKnown RBP1.09□□□□□ -2.23
SMC1YFL008W NFT1P0CE68 1218 aa1.09□□□□□ -2.23
SMC1YFL008W CKA1P15790 372 aa1.09□□□□□ -2.23
SMC1YFL008W SEC62P21825 274 aa1.09□□□□□ -2.23
SMC1YFL008W FRE2P36033 711 aa1.09□□□□□ -2.23
SMC1YFL008W MTC6P38849 526 aa1.09□□□□□ -2.23
SMC1YFL008W ALK1P43633 760 aaKnown RBP1.09□□□□□ -2.23
SMC1YFL008W IRC15Q02733 499 aa1.09□□□□□ -2.23
SMC1YFL008W PDS5Q04264 1277 aa1.09□□□□□ -2.23
SMC1YFL008W TCO89Q08921 799 aa1.09□□□□□ -2.23
SMC1YFL008W RTN2Q12443 393 aa1.09□□□□□ -2.23
SMC1YFL008W VMA16P23968 213 aa1.09□□□□□ -2.24
SMC1YFL008W ERP2P39704 215 aa1.09□□□□□ -2.24
SMC1YFL008W NNF2P53253 936 aa1.09□□□□□ -2.24
SMC1YFL008W GPI15P53961 229 aa1.09□□□□□ -2.24
SMC1YFL008W OAZ1Q02803 292 aa1.09□□□□□ -2.24
SMC1YFL008W SRL2Q12020 392 aa1.09□□□□□ -2.24
SMC1YFL008W YPR022CQ12139 1133 aa1.09□□□□□ -2.24
SMC1YFL008W SAC3P46674 1301 aa1.09□□□□□ -2.24
SMC1YFL008W YLR278CQ05854 1341 aa1.09□□□□□ -2.24
SMC1YFL008W ADE4P04046 510 aaKnown RBP1.09□□□□□ -2.24
SMC1YFL008W PAN6P40459 309 aa1.09□□□□□ -2.24
SMC1YFL008W SHE10P53075 577 aa1.09□□□□□ -2.24
SMC1YFL008W YNL234WP53857 426 aa1.09□□□□□ -2.24
SMC1YFL008W BNI5P53890 448 aaKnown RBP1.09□□□□□ -2.24
SMC1YFL008W IVY1Q04934 453 aa1.09□□□□□ -2.24
SMC1YFL008W UAF30Q08747 228 aa1.09□□□□□ -2.24
SMC1YFL008W ATG29Q12092 213 aa1.09□□□□□ -2.24
SMC1YFL008W NBP2Q12163 236 aa1.09□□□□□ -2.24
SMC1YFL008W SCEIP03882 235 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms