RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	TNA1	P53322	534 aa		3.86	□□□□□ -1.79
SPI1	YER150W	IPI3	P53877	555 aa		3.86	□□□□□ -1.79
SPI1	YER150W	SKI8	Q02793	397 aa	Predicted RBP	3.86	□□□□□ -1.79
SPI1	YER150W	STD1	Q02794	444 aa		3.86	□□□□□ -1.79
SPI1	YER150W	IRC4	Q03036	179 aa		3.86	□□□□□ -1.79
SPI1	YER150W	GCN5	Q03330	439 aa		3.86	□□□□□ -1.79
SPI1	YER150W	TAF12	Q03761	539 aa		3.86	□□□□□ -1.79
SPI1	YER150W	YMR074C	Q04773	145 aa		3.86	□□□□□ -1.79
SPI1	YER150W	FAR8	Q05040	523 aa		3.86	□□□□□ -1.79
SPI1	YER150W	CDC123	Q05791	360 aa		3.86	□□□□□ -1.79
SPI1	YER150W	YFT2	Q06676	274 aa		3.86	□□□□□ -1.79
SPI1	YER150W	CDA1	Q06702	301 aa		3.86	□□□□□ -1.79
SPI1	YER150W	SGO1	Q08490	590 aa		3.86	□□□□□ -1.79
SPI1	YER150W	ALG6	Q12001	544 aa	Known RBP	3.86	□□□□□ -1.79
SPI1	YER150W	GPM2	Q12008	311 aa		3.86	□□□□□ -1.79
SPI1	YER150W	AIM41	Q12032	185 aa		3.86	□□□□□ -1.79
SPI1	YER150W	SLF1	Q12034	447 aa	Known RBP	3.86	□□□□□ -1.79
SPI1	YER150W	YDL007C-A	Q2V2Q0	85 aa		3.86	□□□□□ -1.79
SPI1	YER150W	THP2	O13539	261 aa	Known RBP	3.85	□□□□□ -1.79
SPI1	YER150W	TUB3	P09734	445 aa	Known RBP	3.85	□□□□□ -1.79
SPI1	YER150W	YMR085W	P0CF18	432 aa		3.85	□□□□□ -1.79
SPI1	YER150W	DSF1	P0CX08	502 aa		3.85	□□□□□ -1.79
SPI1	YER150W	YNR073C	P0CX09	502 aa		3.85	□□□□□ -1.79
SPI1	YER150W	RPS16A	P0CX51	143 aa	Known RBP	3.85	□□□□□ -1.79
SPI1	YER150W	RPS16B	P0CX52	143 aa	Known RBP	3.85	□□□□□ -1.79
SPI1	YER150W	MAS1	P10507	462 aa		3.85	□□□□□ -1.79
SPI1	YER150W	REV1	P12689	985 aa		3.85	□□□□□ -1.79
SPI1	YER150W	ALG1	P16661	449 aa		3.85	□□□□□ -1.79
SPI1	YER150W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
SPI1	YER150W	ISY1	P21374	235 aa	Predicted RBP	3.85	□□□□□ -1.79
SPI1	YER150W	LRE1	P25579	583 aa	Known RBP	3.85	□□□□□ -1.79
SPI1	YER150W	IMG1	P25626	169 aa		3.85	□□□□□ -1.79
SPI1	YER150W	NAM9	P27929	486 aa		3.85	□□□□□ -1.79
SPI1	YER150W	YIM1	P28625	365 aa		3.85	□□□□□ -1.79
SPI1	YER150W	VMA6	P32366	345 aa	Known RBP	3.85	□□□□□ -1.79
SPI1	YER150W	ARA1	P38115	344 aa		3.85	□□□□□ -1.79
SPI1	YER150W	ECM21	P38167	1117 aa	Known RBP	3.85	□□□□□ -1.79
SPI1	YER150W	RFT1	P38206	574 aa	Predicted RBP	3.85	□□□□□ -1.79
SPI1	YER150W	OPY1	P38271	328 aa		3.85	□□□□□ -1.79
SPI1	YER150W	MMS21	P38632	267 aa		3.85	□□□□□ -1.79
SPI1	YER150W	YAP3	P38749	330 aa		3.85	□□□□□ -1.79
SPI1	YER150W	FMO1	P38866	432 aa		3.85	□□□□□ -1.79
SPI1	YER150W	YJL206C	P39529	758 aa		3.85	□□□□□ -1.79
SPI1	YER150W	SDP1	P40479	209 aa		3.85	□□□□□ -1.79
SPI1	YER150W	TFG2	P41896	400 aa	Predicted RBP	3.85	□□□□□ -1.79
SPI1	YER150W	AGP3	P43548	558 aa		3.85	□□□□□ -1.79
SPI1	YER150W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
SPI1	YER150W	IDS2	P46958	469 aa		3.85	□□□□□ -1.79
SPI1	YER150W	RTT101	P47050	842 aa		3.85	□□□□□ -1.79
SPI1	YER150W	STE24	P47154	453 aa		3.85	□□□□□ -1.79
SPI1	YER150W	AMA1	P50082	593 aa		3.85	□□□□□ -1.79
SPI1	YER150W	TAF6	P53040	516 aa		3.85	□□□□□ -1.79
SPI1	YER150W	SPP2	Q02521	185 aa		3.85	□□□□□ -1.79
SPI1	YER150W	SHR3	Q02774	210 aa		3.85	□□□□□ -1.79
SPI1	YER150W	YPR147C	Q06522	304 aa	Known RBP	3.85	□□□□□ -1.79
SPI1	YER150W	VPS36	Q06696	566 aa		3.85	□□□□□ -1.79
SPI1	YER150W	YPD1	Q07688	167 aa		3.85	□□□□□ -1.79
SPI1	YER150W	NSE1	Q07913	336 aa		3.85	□□□□□ -1.79
SPI1	YER150W	DNL4	Q08387	944 aa	Predicted RBP	3.85	□□□□□ -1.79
SPI1	YER150W	GEP3	Q08622	556 aa		3.85	□□□□□ -1.79
SPI1	YER150W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
SPI1	YER150W	VAM3	Q12241	283 aa		3.85	□□□□□ -1.79
SPI1	YER150W	YDR262W	Q12331	272 aa		3.85	□□□□□ -1.79
SPI1	YER150W	UBA3	Q99344	299 aa		3.85	□□□□□ -1.79
SPI1	YER150W	ERG20	P08524	352 aa	Known RBP	3.84	□□□□□ -1.79
SPI1	YER150W	SPS4	P09937	338 aa		3.84	□□□□□ -1.79
SPI1	YER150W	YML003W	P0CF16	290 aa		3.84	□□□□□ -1.79
SPI1	YER150W	RPL18A	P0CX49	186 aa	Known RBP	3.84	□□□□□ -1.79
SPI1	YER150W	RPL18B	P0CX50	186 aa	Known RBP	3.84	□□□□□ -1.79
SPI1	YER150W	MRP13	P12686	339 aa		3.84	□□□□□ -1.79
SPI1	YER150W	SNA3	P14359	133 aa		3.84	□□□□□ -1.79
SPI1	YER150W	SRP54	P20424	541 aa	Known RBP	3.84	□□□□□ -1.79
SPI1	YER150W	CSM1	P25651	190 aa		3.84	□□□□□ -1.79
SPI1	YER150W	GSH1	P32477	678 aa		3.84	□□□□□ -1.79
SPI1	YER150W	ZUO1	P32527	433 aa	Known RBP	3.84	□□□□□ -1.79
SPI1	YER150W	LIP5	P32875	414 aa		3.84	□□□□□ -1.79
SPI1	YER150W	MNS1	P32906	549 aa		3.84	□□□□□ -1.79
SPI1	YER150W	YBR144C	P34215	104 aa		3.84	□□□□□ -1.79
SPI1	YER150W	COS9	P36034	407 aa		3.84	□□□□□ -1.79
SPI1	YER150W	CBT1	P36038	271 aa	Predicted RBP	3.84	□□□□□ -1.79
SPI1	YER150W	HMT1	P38074	348 aa		3.84	□□□□□ -1.79
SPI1	YER150W	RTC2	P38279	296 aa		3.84	□□□□□ -1.79
SPI1	YER150W	EHT1	P38295	451 aa		3.84	□□□□□ -1.79
SPI1	YER150W	MSS4	P38994	779 aa		3.84	□□□□□ -1.79
SPI1	YER150W	RPH1	P39956	796 aa		3.84	□□□□□ -1.79
SPI1	YER150W	VAB2	P40003	282 aa		3.84	□□□□□ -1.79
SPI1	YER150W	BUR6	P40096	142 aa		3.84	□□□□□ -1.79
SPI1	YER150W	SPG5	P42933	373 aa		3.84	□□□□□ -1.79
SPI1	YER150W	YJL163C	P46996	555 aa		3.84	□□□□□ -1.79
SPI1	YER150W	MRX5	P47007	382 aa		3.84	□□□□□ -1.79
SPI1	YER150W	COS12	P53053	380 aa		3.84	□□□□□ -1.79
SPI1	YER150W	GET1	P53192	235 aa		3.84	□□□□□ -1.79
SPI1	YER150W	YGR127W	P53275	312 aa		3.84	□□□□□ -1.79
SPI1	YER150W	TRM112	P53738	135 aa	Predicted RBP	3.84	□□□□□ -1.79
SPI1	YER150W	REC102	Q02721	264 aa		3.84	□□□□□ -1.79
SPI1	YER150W	YDC1	Q02896	317 aa		3.84	□□□□□ -1.79
SPI1	YER150W	IZH1	Q03419	316 aa		3.84	□□□□□ -1.79
SPI1	YER150W	MSC2	Q03455	724 aa		3.84	□□□□□ -1.79
SPI1	YER150W	KRE28	Q04431	385 aa		3.84	□□□□□ -1.79
SPI1	YER150W	CDA2	Q06703	312 aa		3.84	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms