RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W IMP4P53941 290 aaKnown RBP3.35□□□□□ -1.87
UBC9YDL064W HXT11P54862 567 aa3.35□□□□□ -1.87
UBC9YDL064W HOT1Q03213 719 aa3.35□□□□□ -1.87
UBC9YDL064W SNT309Q06091 175 aaPredicted RBP3.35□□□□□ -1.87
UBC9YDL064W UAF30Q08747 228 aa3.35□□□□□ -1.87
UBC9YDL064W TIM18Q08749 192 aa3.35□□□□□ -1.87
UBC9YDL064W RMD5Q12508 421 aa3.35□□□□□ -1.87
UBC9YDL064W HEM15P16622 393 aa3.34□□□□□ -1.87
UBC9YDL064W SLY1P22213 666 aa3.34□□□□□ -1.87
UBC9YDL064W CRM1P30822 1084 aaKnown RBP3.34□□□□□ -1.87
UBC9YDL064W PXA2P34230 853 aa3.34□□□□□ -1.87
UBC9YDL064W HEL1P36113 551 aa3.34□□□□□ -1.87
UBC9YDL064W RIB5P38145 238 aa3.34□□□□□ -1.87
UBC9YDL064W RRN10P38204 145 aa3.34□□□□□ -1.87
UBC9YDL064W LAM5P43560 674 aa3.34□□□□□ -1.87
UBC9YDL064W YJL132WP47014 750 aa3.34□□□□□ -1.87
UBC9YDL064W GIP3Q03016 1276 aa3.34□□□□□ -1.87
UBC9YDL064W MUM3Q08750 479 aa3.34□□□□□ -1.87
UBC9YDL064W PKH2Q12236 1081 aaKnown RBP3.34□□□□□ -1.87
UBC9YDL064W SPO12P17123 173 aa3.33□□□□□ -1.88
UBC9YDL064W SPO7P18410 259 aa3.33□□□□□ -1.88
UBC9YDL064W CPR3P25719 182 aa3.33□□□□□ -1.88
UBC9YDL064W MIX23P38162 196 aa3.33□□□□□ -1.88
UBC9YDL064W RFS1P38234 210 aaKnown RBP3.33□□□□□ -1.88
UBC9YDL064W YGR111WP53265 400 aa3.33□□□□□ -1.88
UBC9YDL064W YNR048WP53740 393 aa3.33□□□□□ -1.88
UBC9YDL064W OAZ1Q02803 292 aa3.33□□□□□ -1.88
UBC9YDL064W MRP51Q02950 344 aa3.33□□□□□ -1.88
UBC9YDL064W BET5Q03630 159 aa3.33□□□□□ -1.88
UBC9YDL064W YLL056CQ12177 298 aa3.33□□□□□ -1.88
UBC9YDL064W TEF1P02994 458 aaKnown RBP3.32□□□□□ -1.88
UBC9YDL064W LSB5P25369 354 aa3.32□□□□□ -1.88
UBC9YDL064W CDC60P26637 1090 aaKnown RBP3.32□□□□□ -1.88
UBC9YDL064W YBR139WP38109 508 aa3.32□□□□□ -1.88
UBC9YDL064W ZTA1P38230 334 aaKnown RBP3.32□□□□□ -1.88
UBC9YDL064W LRP1P38801 184 aaKnown RBP3.32□□□□□ -1.88
UBC9YDL064W YAL037WP39728 267 aa3.32□□□□□ -1.88
UBC9YDL064W VHS2P40463 436 aa3.32□□□□□ -1.88
UBC9YDL064W EFM4P40516 257 aa3.32□□□□□ -1.88
UBC9YDL064W LCB2P40970 561 aa3.32□□□□□ -1.88
UBC9YDL064W TOM22P49334 152 aa3.32□□□□□ -1.88
UBC9YDL064W GPI15P53961 229 aa3.32□□□□□ -1.88
UBC9YDL064W REX4Q08237 289 aa3.32□□□□□ -1.88
UBC9YDL064W SKI7Q08491 747 aaPredicted RBP3.32□□□□□ -1.88
UBC9YDL064W RRP12Q12754 1228 aaKnown RBP3.32□□□□□ -1.88
UBC9YDL064W MTR10Q99189 972 aa3.32□□□□□ -1.88
UBC9YDL064W RAD61Q99359 647 aa3.32□□□□□ -1.88
UBC9YDL064W ADE4P04046 510 aaKnown RBP3.31□□□□□ -1.88
UBC9YDL064W IMA3P0CW40 589 aa3.31□□□□□ -1.88
UBC9YDL064W IMA4P0CW41 589 aa3.31□□□□□ -1.88
UBC9YDL064W MNE1P24720 663 aa3.31□□□□□ -1.88
UBC9YDL064W CPR4P25334 318 aa3.31□□□□□ -1.88
UBC9YDL064W ASC1P38011 319 aaKnown RBP3.31□□□□□ -1.88
UBC9YDL064W FAA2P39518 744 aa3.31□□□□□ -1.88
UBC9YDL064W YFL067WP43537 175 aa3.31□□□□□ -1.88
UBC9YDL064W CIK1Q01649 594 aa3.31□□□□□ -1.88
UBC9YDL064W RSN1Q03516 953 aa3.31□□□□□ -1.88
UBC9YDL064W TAF12Q03761 539 aa3.31□□□□□ -1.88
UBC9YDL064W YLR456WQ06199 204 aa3.31□□□□□ -1.88
UBC9YDL064W IMA2Q08295 589 aa3.31□□□□□ -1.88
UBC9YDL064W AEP3Q12089 606 aa3.31□□□□□ -1.88
UBC9YDL064W ARG4P04076 463 aaPredicted RBP3.3□□□□□ -1.88
UBC9YDL064W RAD57P25301 460 aa3.3□□□□□ -1.88
UBC9YDL064W AVT5P38176 459 aa3.3□□□□□ -1.88
UBC9YDL064W YBP1P38315 674 aa3.3□□□□□ -1.88
UBC9YDL064W FAD1P38913 306 aa3.3□□□□□ -1.88
UBC9YDL064W WWM1P43582 211 aaKnown RBP3.3□□□□□ -1.88
UBC9YDL064W NCA3P46955 337 aa3.3□□□□□ -1.88
UBC9YDL064W PPM1Q04081 328 aa3.3□□□□□ -1.88
UBC9YDL064W TLG2Q08144 397 aa3.3□□□□□ -1.88
UBC9YDL064W DCI1Q08558 271 aa3.3□□□□□ -1.88
UBC9YDL064W YOR387CQ08910 206 aa3.3□□□□□ -1.88
UBC9YDL064W SPE3Q12074 293 aaKnown RBP3.3□□□□□ -1.88
UBC9YDL064W PAR32Q12515 295 aaKnown RBP3.3□□□□□ -1.88
UBC9YDL064W NIP1P32497 812 aaKnown RBP3.29□□□□□ -1.88
UBC9YDL064W YKL097CP34245 136 aa3.29□□□□□ -1.88
UBC9YDL064W STP2P38704 541 aa3.29□□□□□ -1.88
UBC9YDL064W BUD27P43573 796 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
UBC9YDL064W SSN8P47821 323 aa3.29□□□□□ -1.88
UBC9YDL064W AZR1P50080 613 aa3.29□□□□□ -1.88
UBC9YDL064W IBD2P53892 351 aa3.29□□□□□ -1.88
UBC9YDL064W SNX3Q08826 162 aaKnown RBP3.29□□□□□ -1.88
UBC9YDL064W BUG1Q12191 341 aa3.29□□□□□ -1.88
UBC9YDL064W RPN5Q12250 445 aaKnown RBP3.29□□□□□ -1.88
UBC9YDL064W SNU66Q12420 587 aaPredicted RBP3.29□□□□□ -1.88
UBC9YDL064W RRP7P25368 297 aaPredicted RBP3.28□□□□□ -1.88
UBC9YDL064W NAM9P27929 486 aa3.28□□□□□ -1.88
UBC9YDL064W RIM1P32445 135 aaKnown RBP3.28□□□□□ -1.88
UBC9YDL064W SWH1P35845 1188 aa3.28□□□□□ -1.88
UBC9YDL064W GPI16P38875 610 aa3.28□□□□□ -1.88
UBC9YDL064W YPS6P40583 537 aa3.28□□□□□ -1.88
UBC9YDL064W CHS6P40955 746 aa3.28□□□□□ -1.88
UBC9YDL064W TOF1P53840 1238 aa3.28□□□□□ -1.88
UBC9YDL064W URH1Q04179 340 aa3.28□□□□□ -1.88
UBC9YDL064W PBA1Q05778 276 aa3.28□□□□□ -1.88
UBC9YDL064W MRPL35Q06678 367 aa3.28□□□□□ -1.88
UBC9YDL064W SGT1Q08446 395 aa3.28□□□□□ -1.88
UBC9YDL064W ESA1Q08649 445 aa3.28□□□□□ -1.88
UBC9YDL064W SRL2Q12020 392 aa3.28□□□□□ -1.88
UBC9YDL064W MED2Q12124 431 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms