RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MSS51P32335 436 aa2.26□□□□□ -2.05
VPS16YPL045W RPC34P32910 317 aa2.26□□□□□ -2.05
VPS16YPL045W OCT1P35999 772 aa2.26□□□□□ -2.05
VPS16YPL045W MRPL40P36534 297 aa2.26□□□□□ -2.05
VPS16YPL045W SDS3P40505 327 aa2.26□□□□□ -2.05
VPS16YPL045W YIL060WP40519 144 aa2.26□□□□□ -2.05
VPS16YPL045W SYG1P40528 902 aa2.26□□□□□ -2.05
VPS16YPL045W MKT1P40850 830 aaKnown RBP2.26□□□□□ -2.05
VPS16YPL045W YJL043WP47053 257 aa2.26□□□□□ -2.05
VPS16YPL045W RMD9P53140 646 aaKnown RBP2.26□□□□□ -2.05
VPS16YPL045W YMR111CQ04461 462 aaPredicted RBP2.26□□□□□ -2.05
VPS16YPL045W PIG1Q06216 648 aa2.26□□□□□ -2.05
VPS16YPL045W YOR365CQ08844 703 aa2.26□□□□□ -2.05
VPS16YPL045W ULA1Q12059 462 aa2.26□□□□□ -2.05
VPS16YPL045W PDR5P33302 1511 aaKnown RBP2.26□□□□□ -2.05
VPS16YPL045W USO1P25386 1790 aa2.26□□□□□ -2.05
VPS16YPL045W VMR1P38735 1592 aa2.26□□□□□ -2.05
VPS16YPL045W SCEIP03882 235 aa2.25□□□□□ -2.05
VPS16YPL045W SAT4P25333 603 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W YKL023WP36103 277 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W DUG2P38149 878 aa2.25□□□□□ -2.05
VPS16YPL045W MSG5P38590 489 aa2.25□□□□□ -2.05
VPS16YPL045W VPS41P38959 992 aa2.25□□□□□ -2.05
VPS16YPL045W HXT9P40885 567 aa2.25□□□□□ -2.05
VPS16YPL045W RPA34P47006 233 aaPredicted RBP2.25□□□□□ -2.05
VPS16YPL045W ORC5P50874 479 aa2.25□□□□□ -2.05
VPS16YPL045W PKP2P53170 491 aa2.25□□□□□ -2.05
VPS16YPL045W RPN14P53196 417 aa2.25□□□□□ -2.05
VPS16YPL045W BUD32P53323 261 aa2.25□□□□□ -2.05
VPS16YPL045W DUG3P53871 357 aa2.25□□□□□ -2.05
VPS16YPL045W EAF7P53911 425 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W ARP5P53946 755 aa2.25□□□□□ -2.05
VPS16YPL045W TIM11P81449 96 aaPredicted RBP2.25□□□□□ -2.05
VPS16YPL045W YVH1Q02256 364 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W SNU56Q03782 492 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W VPS20Q04272 221 aa2.25□□□□□ -2.05
VPS16YPL045W TMN2Q04562 672 aa2.25□□□□□ -2.05
VPS16YPL045W MSC3Q05812 728 aa2.25□□□□□ -2.05
VPS16YPL045W MCH4Q08268 501 aa2.25□□□□□ -2.05
VPS16YPL045W NDJ1Q12366 352 aa2.25□□□□□ -2.05
VPS16YPL045W BRR1Q99177 341 aaPredicted RBP2.25□□□□□ -2.05
VPS16YPL045W IKI3Q06706 1349 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W ADE4P04046 510 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W ILV5P06168 395 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W PEP5P12868 1029 aa2.25□□□□□ -2.05
VPS16YPL045W ELM1P32801 640 aa2.25□□□□□ -2.05
VPS16YPL045W VPS17P32913 551 aa2.25□□□□□ -2.05
VPS16YPL045W MSN2P33748 704 aa2.25□□□□□ -2.05
VPS16YPL045W EBP2P36049 427 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W ROT2P38138 954 aa2.25□□□□□ -2.05
VPS16YPL045W YHR131CP38835 850 aa2.25□□□□□ -2.05
VPS16YPL045W CCT2P39076 527 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W YER130CP39959 443 aa2.25□□□□□ -2.05
VPS16YPL045W TFG2P41896 400 aaPredicted RBP2.25□□□□□ -2.05
VPS16YPL045W AIP1P46680 615 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W NMD5P46970 1048 aa2.25□□□□□ -2.05
VPS16YPL045W YJR154WP47181 346 aa2.25□□□□□ -2.05
VPS16YPL045W ROG1P53118 685 aa2.25□□□□□ -2.05
VPS16YPL045W PRM1P53835 661 aa2.25□□□□□ -2.05
VPS16YPL045W SHR3Q02774 210 aa2.25□□□□□ -2.05
VPS16YPL045W PDR8Q06149 701 aa2.25□□□□□ -2.05
VPS16YPL045W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
VPS16YPL045W RDL1Q12305 139 aaKnown RBP2.25□□□□□ -2.05
VPS16YPL045W BNR1P40450 1375 aa2.25□□□□□ -2.05
VPS16YPL045W YPR089WO13585 888 aa2.24□□□□□ -2.05
VPS16YPL045W YMR085WP0CF18 432 aa2.24□□□□□ -2.05
VPS16YPL045W TYR1P20049 452 aa2.24□□□□□ -2.05
VPS16YPL045W SAG1P20840 650 aa2.24□□□□□ -2.05
VPS16YPL045W DMC1P25453 334 aa2.24□□□□□ -2.05
VPS16YPL045W ARN1P38731 627 aa2.24□□□□□ -2.05
VPS16YPL045W GPI16P38875 610 aa2.24□□□□□ -2.05
VPS16YPL045W STN1P38960 494 aa2.24□□□□□ -2.05
VPS16YPL045W TAX4P47030 604 aa2.24□□□□□ -2.05
VPS16YPL045W AVT1P47082 602 aa2.24□□□□□ -2.05
VPS16YPL045W YJR011CP47086 261 aaPredicted RBP2.24□□□□□ -2.05
VPS16YPL045W MPS2P53159 387 aa2.24□□□□□ -2.05
VPS16YPL045W RRP46P53256 223 aaPredicted RBP2.24□□□□□ -2.05
VPS16YPL045W SUN4P53616 420 aa2.24□□□□□ -2.05
VPS16YPL045W SMM1P53720 384 aaKnown RBP2.24□□□□□ -2.05
VPS16YPL045W TIM44Q01852 431 aa2.24□□□□□ -2.05
VPS16YPL045W SMA1Q02651 245 aa2.24□□□□□ -2.05
VPS16YPL045W YDR541CQ03049 344 aa2.24□□□□□ -2.05
VPS16YPL045W RRB1Q04225 511 aaKnown RBP2.24□□□□□ -2.05
VPS16YPL045W MRPL1Q04599 285 aa2.24□□□□□ -2.05
VPS16YPL045W YLH47Q06493 454 aa2.24□□□□□ -2.05
VPS16YPL045W GSH2Q08220 491 aa2.24□□□□□ -2.05
VPS16YPL045W PFK27Q12471 397 aaPredicted RBP2.24□□□□□ -2.05
VPS16YPL045W SUC2P00724 532 aa2.24□□□□□ -2.05
VPS16YPL045W MES1P00958 751 aaKnown RBP2.24□□□□□ -2.05
VPS16YPL045W CBP2P03874 630 aaPredicted RBP2.24□□□□□ -2.05
VPS16YPL045W GAL7P08431 366 aa2.24□□□□□ -2.05
VPS16YPL045W FUN19P28003 413 aaPredicted RBP2.24□□□□□ -2.05
VPS16YPL045W ATP11P32453 318 aa2.24□□□□□ -2.05
VPS16YPL045W SOR1P35497 357 aaKnown RBP2.24□□□□□ -2.05
VPS16YPL045W PTK1P36002 662 aaPredicted RBP2.24□□□□□ -2.05
VPS16YPL045W YBR139WP38109 508 aa2.24□□□□□ -2.05
VPS16YPL045W RRN10P38204 145 aa2.24□□□□□ -2.05
VPS16YPL045W EFM2P38347 419 aa2.24□□□□□ -2.05
VPS16YPL045W RRP4P38792 359 aaKnown RBP2.24□□□□□ -2.05
VPS16YPL045W MNL1P38888 796 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms