RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W YFR020WP43600 232 aa3.06□□□□□ -1.92
MSH2YOL090W BRO1P48582 844 aa3.06□□□□□ -1.92
MSH2YOL090W ROG1P53118 685 aa3.06□□□□□ -1.92
MSH2YOL090W ERG5P54781 538 aa3.06□□□□□ -1.92
MSH2YOL090W ORC3P54790 616 aa3.06□□□□□ -1.92
MSH2YOL090W MFM1Q02783 413 aa3.06□□□□□ -1.92
MSH2YOL090W NRG1Q03125 231 aa3.06□□□□□ -1.92
MSH2YOL090W CYK3Q07533 885 aa3.06□□□□□ -1.92
MSH2YOL090W YDL242WQ07746 117 aa3.06□□□□□ -1.92
MSH2YOL090W PUT2P07275 575 aa3.06□□□□□ -1.92
MSH2YOL090W APA2P22108 325 aa3.06□□□□□ -1.92
MSH2YOL090W RIM1P32445 135 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W ACP1P32463 125 aa3.06□□□□□ -1.92
MSH2YOL090W IMP3P32899 183 aaPredicted RBP3.06□□□□□ -1.92
MSH2YOL090W YHR177WP38867 453 aa3.06□□□□□ -1.92
MSH2YOL090W DPB11P47027 764 aaPredicted RBP3.06□□□□□ -1.92
MSH2YOL090W MPS3P47069 682 aa3.06□□□□□ -1.92
MSH2YOL090W DIA3P52290 468 aa3.06□□□□□ -1.92
MSH2YOL090W PGA2P53903 129 aa3.06□□□□□ -1.92
MSH2YOL090W ADE16P54113 591 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W RRG8Q06109 277 aa3.06□□□□□ -1.92
MSH2YOL090W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
MSH2YOL090W INP53Q12271 1107 aa3.06□□□□□ -1.92
MSH2YOL090W RRP12Q12754 1228 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W TY4B-HP0C2J7 1802 aa3.05□□□□□ -1.92
MSH2YOL090W TY4B-JP47024 1803 aa3.05□□□□□ -1.92
MSH2YOL090W PET111P08468 800 aa3.05□□□□□ -1.92
MSH2YOL090W SAM1P10659 382 aaKnown RBP3.05□□□□□ -1.92
MSH2YOL090W KGD2P19262 463 aaPredicted RBP3.05□□□□□ -1.92
MSH2YOL090W ADY2P25613 283 aa3.05□□□□□ -1.92
MSH2YOL090W GSH1P32477 678 aa3.05□□□□□ -1.92
MSH2YOL090W TOM71P38825 639 aaKnown RBP3.05□□□□□ -1.92
MSH2YOL090W UIP3P39547 235 aa3.05□□□□□ -1.92
MSH2YOL090W ECM10P39987 644 aa3.05□□□□□ -1.92
MSH2YOL090W CDC40P40968 455 aaPredicted RBP3.05□□□□□ -1.92
MSH2YOL090W OTU1P43558 301 aa3.05□□□□□ -1.92
MSH2YOL090W EMC2P47133 292 aaKnown RBP3.05□□□□□ -1.92
MSH2YOL090W GTF1P53260 183 aaPredicted RBP3.05□□□□□ -1.92
MSH2YOL090W YGR117CP53270 476 aa3.05□□□□□ -1.92
MSH2YOL090W WAR1Q03631 944 aa3.05□□□□□ -1.92
MSH2YOL090W POS5Q06892 414 aa3.05□□□□□ -1.92
MSH2YOL090W RKM1Q08961 583 aaPredicted RBP3.05□□□□□ -1.92
MSH2YOL090W MSF1P08425 469 aa3.05□□□□□ -1.92
MSH2YOL090W ABF1P14164 731 aa3.05□□□□□ -1.92
MSH2YOL090W SEC63P14906 663 aa3.05□□□□□ -1.92
MSH2YOL090W FUS3P16892 353 aaKnown RBP3.05□□□□□ -1.92
MSH2YOL090W PTC6P25646 442 aa3.05□□□□□ -1.92
MSH2YOL090W PSO2P30620 661 aa3.05□□□□□ -1.92
MSH2YOL090W MVD1P32377 396 aaKnown RBP3.05□□□□□ -1.92
MSH2YOL090W EMP70P32802 667 aa3.05□□□□□ -1.92
MSH2YOL090W ELF1P36053 145 aa3.05□□□□□ -1.92
MSH2YOL090W SPP381P38282 291 aaPredicted RBP3.05□□□□□ -1.92
MSH2YOL090W STN1P38960 494 aa3.05□□□□□ -1.92
MSH2YOL090W RPS10BP46784 105 aaKnown RBP3.05□□□□□ -1.92
MSH2YOL090W TAX4P47030 604 aa3.05□□□□□ -1.92
MSH2YOL090W HSH155P49955 971 aaKnown RBP3.05□□□□□ -1.92
MSH2YOL090W YGL108CP53139 140 aa3.05□□□□□ -1.92
MSH2YOL090W NSG2P53898 299 aa3.05□□□□□ -1.92
MSH2YOL090W YPL034WQ03083 165 aa3.05□□□□□ -1.92
MSH2YOL090W DUS4Q06063 367 aa3.05□□□□□ -1.92
MSH2YOL090W IPK1Q06667 281 aa3.05□□□□□ -1.92
MSH2YOL090W TSR1Q07381 788 aaKnown RBP3.05□□□□□ -1.92
MSH2YOL090W RPS10AQ08745 105 aaPredicted RBP3.05□□□□□ -1.92
MSH2YOL090W AFT2Q08957 416 aa3.05□□□□□ -1.92
MSH2YOL090W MRH1Q12117 320 aaPredicted RBP3.05□□□□□ -1.92
MSH2YOL090W BAG7Q12128 409 aa3.05□□□□□ -1.92
MSH2YOL090W TRM13Q12383 476 aa3.05□□□□□ -1.92
MSH2YOL090W PAA1Q12447 191 aaKnown RBP3.05□□□□□ -1.92
MSH2YOL090W TRM11Q12463 433 aa3.05□□□□□ -1.92
MSH2YOL090W FMP16Q12497 93 aa3.05□□□□□ -1.92
MSH2YOL090W YLR419WQ06698 1435 aaKnown RBP3.04□□□□□ -1.92
MSH2YOL090W HIS5P07172 385 aa3.04□□□□□ -1.92
MSH2YOL090W RIP1P08067 215 aa3.04□□□□□ -1.92
MSH2YOL090W GPA1P08539 472 aa3.04□□□□□ -1.92
MSH2YOL090W POL30P15873 258 aaKnown RBP3.04□□□□□ -1.92
MSH2YOL090W BEM1P29366 551 aa3.04□□□□□ -1.92
MSH2YOL090W PMI40P29952 429 aaKnown RBP3.04□□□□□ -1.92
MSH2YOL090W RAD23P32628 398 aaKnown RBP3.04□□□□□ -1.92
MSH2YOL090W FRE1P32791 686 aa3.04□□□□□ -1.92
MSH2YOL090W RPC34P32910 317 aa3.04□□□□□ -1.92
MSH2YOL090W CUE2P36075 443 aaKnown RBP3.04□□□□□ -1.92
MSH2YOL090W ARA1P38115 344 aa3.04□□□□□ -1.92
MSH2YOL090W IML3P38265 245 aa3.04□□□□□ -1.92
MSH2YOL090W SBE22P38814 852 aa3.04□□□□□ -1.92
MSH2YOL090W FAR3P46671 204 aa3.04□□□□□ -1.92
MSH2YOL090W ATG27P46989 271 aa3.04□□□□□ -1.92
MSH2YOL090W FMP33P46998 180 aa3.04□□□□□ -1.92
MSH2YOL090W UBX6P47049 396 aa3.04□□□□□ -1.92
MSH2YOL090W EFM5P53200 248 aaKnown RBP3.04□□□□□ -1.92
MSH2YOL090W UBP16Q02863 499 aa3.04□□□□□ -1.92
MSH2YOL090W MED2Q12124 431 aa3.04□□□□□ -1.92
MSH2YOL090W NCE102Q12207 173 aaRIP-Chip data3.04□□□□□ -1.92not detected
MSH2YOL090W NPC2Q12408 173 aa3.04□□□□□ -1.92
MSH2YOL090W YPT1P01123 206 aaKnown RBP3.04□□□□□ -1.92
MSH2YOL090W PMR1P13586 950 aa3.04□□□□□ -1.92
MSH2YOL090W RPI1P23250 407 aaKnown RBP3.04□□□□□ -1.92
MSH2YOL090W YUR1P26725 428 aa3.04□□□□□ -1.92
MSH2YOL090W SIP1P32578 815 aa3.04□□□□□ -1.92
MSH2YOL090W BMH2P34730 273 aaKnown RBP3.04□□□□□ -1.92
MSH2YOL090W GMH1P36125 273 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms