RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
VPS33YLR396C MSH5Q12175 901 aa3.31□□□□□ -1.88
VPS33YLR396C NCA2Q12374 616 aa3.31□□□□□ -1.88
VPS33YLR396C YJR112W-AQ3E743 109 aa3.31□□□□□ -1.88
VPS33YLR396C SNA3P14359 133 aa3.3□□□□□ -1.88
VPS33YLR396C DPB2P24482 689 aaPredicted RBP3.3□□□□□ -1.88
VPS33YLR396C BOS1P25385 244 aa3.3□□□□□ -1.88
VPS33YLR396C GID7P25569 745 aa3.3□□□□□ -1.88
VPS33YLR396C VPH2P32341 215 aa3.3□□□□□ -1.88
VPS33YLR396C MTR2P34232 184 aaKnown RBP3.3□□□□□ -1.88
VPS33YLR396C DBP7P36120 742 aaKnown RBP3.3□□□□□ -1.88
VPS33YLR396C PTR3P43606 678 aa3.3□□□□□ -1.88
VPS33YLR396C IMD4P50094 524 aaKnown RBP3.3□□□□□ -1.88
VPS33YLR396C CUE3P53137 624 aaKnown RBP3.3□□□□□ -1.88
VPS33YLR396C RBG2P53295 368 aaKnown RBP3.3□□□□□ -1.88
VPS33YLR396C SOL4P53315 255 aa3.3□□□□□ -1.88
VPS33YLR396C RPC11Q04307 110 aaPredicted RBP3.3□□□□□ -1.88
VPS33YLR396C MFB1Q04922 465 aa3.3□□□□□ -1.88
VPS33YLR396C RRP9Q06506 573 aaKnown RBP3.3□□□□□ -1.88
VPS33YLR396C CFT2Q12102 859 aaPredicted RBP3.3□□□□□ -1.88
VPS33YLR396C IES3Q12345 250 aa3.3□□□□□ -1.88
VPS33YLR396C RPL24AP04449 155 aaKnown RBP3.29□□□□□ -1.88
VPS33YLR396C MRP13P12686 339 aa3.29□□□□□ -1.88
VPS33YLR396C EST1P17214 699 aaPredicted RBP3.29□□□□□ -1.88
VPS33YLR396C HXT1P32465 570 aa3.29□□□□□ -1.88
VPS33YLR396C SRO77P38163 1010 aa3.29□□□□□ -1.88
VPS33YLR396C ARC40P38328 384 aaKnown RBP3.29□□□□□ -1.88
VPS33YLR396C PEX18P38855 283 aa3.29□□□□□ -1.88
VPS33YLR396C SMX2P40204 77 aaKnown RBP3.29□□□□□ -1.88
VPS33YLR396C PDS1P40316 373 aaPredicted RBP3.29□□□□□ -1.88
VPS33YLR396C SGN1P40561 250 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
VPS33YLR396C RTS2P40962 232 aa3.29□□□□□ -1.88
VPS33YLR396C FET5P43561 622 aa3.29□□□□□ -1.88
VPS33YLR396C URB2P47108 1174 aa3.29□□□□□ -1.88
VPS33YLR396C YNL040WP53960 456 aaPredicted RBP3.29□□□□□ -1.88
VPS33YLR396C TDA9Q04545 1251 aa3.29□□□□□ -1.88
VPS33YLR396C YMR254CQ04838 102 aa3.29□□□□□ -1.88
VPS33YLR396C SNA4Q07549 140 aa3.29□□□□□ -1.88
VPS33YLR396C YAP7Q08182 245 aa3.29□□□□□ -1.88
VPS33YLR396C SRL1Q08673 210 aa3.29□□□□□ -1.88
VPS33YLR396C HTZ1Q12692 134 aaKnown RBP3.29□□□□□ -1.88
VPS33YLR396C SRV2P17555 526 aaKnown RBP3.29□□□□□ -1.88
VPS33YLR396C FAR1P21268 830 aa3.29□□□□□ -1.88
VPS33YLR396C REG2P38232 338 aa3.29□□□□□ -1.88
VPS33YLR396C ICS2P38284 255 aa3.29□□□□□ -1.88
VPS33YLR396C IRC6P43615 237 aa3.29□□□□□ -1.88
VPS33YLR396C STB2P46679 850 aa3.29□□□□□ -1.88
VPS33YLR396C AIP1P46680 615 aaKnown RBP3.29□□□□□ -1.88
VPS33YLR396C YGR066CP53242 292 aa3.29□□□□□ -1.88
VPS33YLR396C YML108WQ03759 105 aa3.29□□□□□ -1.88
VPS33YLR396C RDR1Q08904 546 aa3.29□□□□□ -1.88
VPS33YLR396C YIL177CP40434 1758 aa3.28□□□□□ -1.88
VPS33YLR396C YJL225CP40889 1758 aa3.28□□□□□ -1.88
VPS33YLR396C POM152P39685 1337 aa3.28□□□□□ -1.88
VPS33YLR396C TUS1Q06412 1307 aa3.28□□□□□ -1.88
VPS33YLR396C VPS1P21576 704 aaKnown RBP3.28□□□□□ -1.88
VPS33YLR396C YCR043CP25361 127 aa3.28□□□□□ -1.88
VPS33YLR396C SPS22P25380 463 aa3.28□□□□□ -1.88
VPS33YLR396C BUD23P25627 275 aaPredicted RBP3.28□□□□□ -1.88
VPS33YLR396C UBC6P33296 250 aaPredicted RBP3.28□□□□□ -1.88
VPS33YLR396C SEF1P34228 1148 aa3.28□□□□□ -1.88
VPS33YLR396C RPC25P35718 212 aa3.28□□□□□ -1.88
VPS33YLR396C UBP11P36026 717 aa3.28□□□□□ -1.88
VPS33YLR396C FES1P38260 290 aa3.28□□□□□ -1.88
VPS33YLR396C ALG5P40350 334 aa3.28□□□□□ -1.88
VPS33YLR396C SNM1P40993 198 aa3.28□□□□□ -1.88
VPS33YLR396C MAF1P41910 395 aa3.28□□□□□ -1.88
VPS33YLR396C RMD8P43620 662 aa3.28□□□□□ -1.88
VPS33YLR396C LSG1P53145 640 aaKnown RBP3.28□□□□□ -1.88
VPS33YLR396C RSF1Q05043 376 aa3.28□□□□□ -1.88
VPS33YLR396C SIL1Q08199 421 aa3.28□□□□□ -1.88
VPS33YLR396C DNL4Q08387 944 aaPredicted RBP3.28□□□□□ -1.88
VPS33YLR396C VIK1Q12045 647 aa3.28□□□□□ -1.88
VPS33YLR396C NCE102Q12207 173 aaRIP-Chip data3.28□□□□□ -1.88not detected
VPS33YLR396C SSK22P25390 1331 aaPredicted RBP3.28□□□□□ -1.89
VPS33YLR396C TY4B-HP0C2J7 1802 aa3.28□□□□□ -1.89
VPS33YLR396C TY4B-JP47024 1803 aa3.28□□□□□ -1.89
VPS33YLR396C DFR1P07807 211 aaKnown RBP RIP-Chip data3.28□□□□□ -1.89not detected
VPS33YLR396C CLN3P13365 580 aa3.28□□□□□ -1.89
VPS33YLR396C ART10P18634 518 aaKnown RBP3.28□□□□□ -1.89
VPS33YLR396C OCA4P25366 362 aa3.28□□□□□ -1.89
VPS33YLR396C MGR1P25573 417 aa3.28□□□□□ -1.89
VPS33YLR396C BMH1P29311 267 aaKnown RBP3.28□□□□□ -1.89
VPS33YLR396C UTP11P34247 250 aaPredicted RBP3.28□□□□□ -1.89
VPS33YLR396C AST1P35183 429 aa3.28□□□□□ -1.89
VPS33YLR396C TCD2P36101 447 aaKnown RBP3.28□□□□□ -1.89
VPS33YLR396C RPL32P38061 130 aaKnown RBP3.28□□□□□ -1.89
VPS33YLR396C MUM2P38236 366 aa3.28□□□□□ -1.89
VPS33YLR396C HSM3P38348 480 aa3.28□□□□□ -1.89
VPS33YLR396C YEL057CP39983 233 aa3.28□□□□□ -1.89
VPS33YLR396C TES1P41903 349 aaKnown RBP3.28□□□□□ -1.89
VPS33YLR396C COS6P53344 381 aa3.28□□□□□ -1.89
VPS33YLR396C IPI3P53877 555 aa3.28□□□□□ -1.89
VPS33YLR396C CIK1Q01649 594 aa3.28□□□□□ -1.89
VPS33YLR396C MDM1Q01846 1127 aa3.28□□□□□ -1.89
VPS33YLR396C RPM2Q02773 1202 aa3.28□□□□□ -1.89
VPS33YLR396C DIG1Q03063 452 aaKnown RBP3.28□□□□□ -1.89
VPS33YLR396C YMR111CQ04461 462 aaPredicted RBP3.28□□□□□ -1.89
VPS33YLR396C ATG17Q06410 417 aa3.28□□□□□ -1.89
VPS33YLR396C YOL075CQ08234 1294 aa3.28□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms