RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C FAD1P38913 306 aa4.74□□□□□ -1.65
SEC9YGR009C ICP55P40051 511 aa4.74□□□□□ -1.65
SEC9YGR009C INP51P40559 946 aaKnown RBP4.74□□□□□ -1.65
SEC9YGR009C PSA1P41940 361 aaKnown RBP4.74□□□□□ -1.65
SEC9YGR009C PPT1P53043 513 aa4.74□□□□□ -1.65
SEC9YGR009C UFD1P53044 361 aa4.74□□□□□ -1.65
SEC9YGR009C DID2P69771 204 aa4.74□□□□□ -1.65
SEC9YGR009C TIM44Q01852 431 aa4.74□□□□□ -1.65
SEC9YGR009C YDR476CQ03362 224 aa4.74□□□□□ -1.65
SEC9YGR009C PPM1Q04081 328 aa4.74□□□□□ -1.65
SEC9YGR009C DAL4Q04895 635 aa4.74□□□□□ -1.65
SEC9YGR009C MLH3Q12083 715 aa4.74□□□□□ -1.65
SEC9YGR009C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
SEC9YGR009C YPK9Q12697 1472 aa4.74□□□□□ -1.65
SEC9YGR009C YLR278CQ05854 1341 aa4.73□□□□□ -1.65
SEC9YGR009C CDC33P07260 213 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C SCH9P11792 824 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C TOP3P13099 656 aa4.73□□□□□ -1.65
SEC9YGR009C SAC7P17121 654 aa4.73□□□□□ -1.65
SEC9YGR009C CNA1P23287 553 aa4.73□□□□□ -1.65
SEC9YGR009C RSA4P25382 515 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C SSE2P32590 693 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C SOF1P33750 489 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C YBL055CP34220 418 aaPredicted RBP4.73□□□□□ -1.65
SEC9YGR009C YKL071WP36086 256 aa4.73□□□□□ -1.65
SEC9YGR009C SHE3P38272 425 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C PRP39P39682 629 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C DLD3P39976 496 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C POG1P40473 351 aa4.73□□□□□ -1.65
SEC9YGR009C NMD5P46970 1048 aa4.73□□□□□ -1.65
SEC9YGR009C HIT1P46973 164 aa4.73□□□□□ -1.65
SEC9YGR009C SPC98P53540 846 aa4.73□□□□□ -1.65
SEC9YGR009C YNL140CP53910 189 aa4.73□□□□□ -1.65
SEC9YGR009C SKO1Q02100 647 aa4.73□□□□□ -1.65
SEC9YGR009C DYN2Q02647 92 aa4.73□□□□□ -1.65
SEC9YGR009C ISU1Q03020 165 aa4.73□□□□□ -1.65
SEC9YGR009C VHS1Q03785 461 aa4.73□□□□□ -1.65
SEC9YGR009C ARX1Q03862 593 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C CSM3Q04659 317 aa4.73□□□□□ -1.65
SEC9YGR009C SYT1Q06836 1226 aa4.73□□□□□ -1.65
SEC9YGR009C RCL1Q08096 367 aaPredicted RBP4.73□□□□□ -1.65
SEC9YGR009C CRT10Q08226 957 aa4.73□□□□□ -1.65
SEC9YGR009C ZEO1Q08245 113 aa4.73□□□□□ -1.65
SEC9YGR009C FRE3Q08905 711 aa4.73□□□□□ -1.65
SEC9YGR009C TRE1Q08919 783 aa4.73□□□□□ -1.65
SEC9YGR009C YPR027CQ12079 277 aa4.73□□□□□ -1.65
SEC9YGR009C NSL1Q12143 216 aa4.73□□□□□ -1.65
SEC9YGR009C YDR061WQ12298 539 aa4.73□□□□□ -1.65
SEC9YGR009C TIF6Q12522 245 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C AFI1Q99222 893 aa4.73□□□□□ -1.65
SEC9YGR009C YOR304C-AO14468 76 aa4.73□□□□□ -1.65
SEC9YGR009C HEM13P11353 328 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C MET16P18408 261 aaPredicted RBP4.73□□□□□ -1.65
SEC9YGR009C RPB10P22139 70 aa4.73□□□□□ -1.65
SEC9YGR009C RPS5P26783 225 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C HBS1P32769 611 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C UPS2P35200 230 aa4.73□□□□□ -1.65
SEC9YGR009C CSG2P35206 410 aa4.73□□□□□ -1.65
SEC9YGR009C MCH2P36032 473 aa4.73□□□□□ -1.65
SEC9YGR009C FMP23P38231 175 aa4.73□□□□□ -1.65
SEC9YGR009C SPP381P38282 291 aaPredicted RBP4.73□□□□□ -1.65
SEC9YGR009C UME6P39001 836 aa4.73□□□□□ -1.65
SEC9YGR009C BDH1P39714 382 aa4.73□□□□□ -1.65
SEC9YGR009C YEL057CP39983 233 aa4.73□□□□□ -1.65
SEC9YGR009C GDS1P41913 522 aa4.73□□□□□ -1.65
SEC9YGR009C PRM10P42946 383 aa4.73□□□□□ -1.65
SEC9YGR009C ARC1P46672 376 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C RPC17P47076 161 aa4.73□□□□□ -1.65
SEC9YGR009C CSN9Q03981 162 aa4.73□□□□□ -1.65
SEC9YGR009C MYO5Q04439 1219 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C SOV1Q04748 898 aa4.73□□□□□ -1.65
SEC9YGR009C FMP42Q04991 504 aa4.73□□□□□ -1.65
SEC9YGR009C ECM30Q06673 1274 aa4.73□□□□□ -1.65
SEC9YGR009C NRT1Q08485 598 aa4.73□□□□□ -1.65
SEC9YGR009C SKI7Q08491 747 aaPredicted RBP4.73□□□□□ -1.65
SEC9YGR009C GPM2Q12008 311 aa4.73□□□□□ -1.65
SEC9YGR009C YRA1Q12159 226 aaKnown RBP4.73□□□□□ -1.65
SEC9YGR009C HVG1P0CE11 249 aa4.72□□□□□ -1.65
SEC9YGR009C SNF3P10870 884 aa4.72□□□□□ -1.65
SEC9YGR009C SLY1P22213 666 aa4.72□□□□□ -1.65
SEC9YGR009C PEP3P27801 918 aa4.72□□□□□ -1.65
SEC9YGR009C CWP1P28319 239 aa4.72□□□□□ -1.65
SEC9YGR009C SFB3P38810 929 aa4.72□□□□□ -1.65
SEC9YGR009C AIM18P38884 321 aa4.72□□□□□ -1.65
SEC9YGR009C UBP5P39944 805 aa4.72□□□□□ -1.65
SEC9YGR009C PDS1P40316 373 aaPredicted RBP4.72□□□□□ -1.65
SEC9YGR009C CAK1P43568 368 aaPredicted RBP4.72□□□□□ -1.65
SEC9YGR009C APT1P49435 187 aaKnown RBP4.72□□□□□ -1.65
SEC9YGR009C IMO32P53219 342 aa4.72□□□□□ -1.65
SEC9YGR009C YPL066WQ12194 479 aa4.72□□□□□ -1.65
SEC9YGR009C CBP1P07252 654 aa4.71□□□□□ -1.66
SEC9YGR009C CAF20P12962 161 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C PHA2P32452 334 aa4.71□□□□□ -1.66
SEC9YGR009C PDR3P33200 976 aa4.71□□□□□ -1.66
SEC9YGR009C TGL1P34163 548 aa4.71□□□□□ -1.66
SEC9YGR009C SEF1P34228 1148 aa4.71□□□□□ -1.66
SEC9YGR009C TUL1P36096 758 aa4.71□□□□□ -1.66
SEC9YGR009C YBR139WP38109 508 aa4.71□□□□□ -1.66
SEC9YGR009C YER130CP39959 443 aa4.71□□□□□ -1.66
SEC9YGR009C BUR6P40096 142 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms