RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W VPS75P53853 264 aa2.29□□□□□ -2.04
NIC96YFR002W YMR155WQ03795 547 aa2.29□□□□□ -2.04
NIC96YFR002W YDR131CQ03899 556 aa2.29□□□□□ -2.04
NIC96YFR002W IVY1Q04934 453 aa2.29□□□□□ -2.04
NIC96YFR002W YRF1-4O13559 1382 aa2.29□□□□□ -2.04
NIC96YFR002W ARG3P05150 338 aa2.29□□□□□ -2.04
NIC96YFR002W CUP1-1P0CX80 61 aa2.29□□□□□ -2.04
NIC96YFR002W CUP1-2P0CX81 61 aa2.29□□□□□ -2.04
NIC96YFR002W ART10P18634 518 aaKnown RBP2.29□□□□□ -2.04
NIC96YFR002W SUI2P20459 304 aaKnown RBP2.29□□□□□ -2.04
NIC96YFR002W PUT3P25502 979 aaPredicted RBP2.29□□□□□ -2.04
NIC96YFR002W DPH2P32461 534 aa2.29□□□□□ -2.04
NIC96YFR002W UTR4P32626 227 aa2.29□□□□□ -2.04
NIC96YFR002W PXA2P34230 853 aa2.29□□□□□ -2.04
NIC96YFR002W YBL029WP38201 376 aa2.29□□□□□ -2.04
NIC96YFR002W SRP72P38688 640 aaKnown RBP2.29□□□□□ -2.04
NIC96YFR002W ALG8P40351 577 aa2.29□□□□□ -2.04
NIC96YFR002W MRX6P48564 524 aa2.29□□□□□ -2.04
NIC96YFR002W PHO92Q06390 306 aa2.29□□□□□ -2.04
NIC96YFR002W DIB1Q06819 143 aaPredicted RBP2.29□□□□□ -2.04
NIC96YFR002W RTN2Q12443 393 aa2.29□□□□□ -2.04
NIC96YFR002W CTF3Q12748 733 aa2.29□□□□□ -2.04
NIC96YFR002W PDX1P16451 410 aa2.28□□□□□ -2.04
NIC96YFR002W APE3P37302 537 aaKnown RBP2.28□□□□□ -2.04
NIC96YFR002W PES4P39684 611 aa2.28□□□□□ -2.04
NIC96YFR002W TIF4631P39935 952 aaKnown RBP2.28□□□□□ -2.04
NIC96YFR002W SPO22P40511 975 aa2.28□□□□□ -2.04
NIC96YFR002W MSO1P53604 210 aaKnown RBP2.28□□□□□ -2.04
NIC96YFR002W YDR286CQ05530 114 aa2.28□□□□□ -2.04
NIC96YFR002W YLR345WQ06137 509 aa2.28□□□□□ -2.04
NIC96YFR002W HNT3Q08702 217 aa2.28□□□□□ -2.04
NIC96YFR002W SMC6Q12749 1114 aa2.28□□□□□ -2.04
NIC96YFR002W YBR126W-AQ8TGU7 68 aa2.28□□□□□ -2.04
NIC96YFR002W RAV1P47104 1357 aa2.28□□□□□ -2.04
NIC96YFR002W GCN4P03069 281 aa2.28□□□□□ -2.04
NIC96YFR002W ANP1P32629 500 aa2.28□□□□□ -2.04
NIC96YFR002W YBP1P38315 674 aa2.28□□□□□ -2.04
NIC96YFR002W AFG3P39925 761 aa2.28□□□□□ -2.04
NIC96YFR002W AIM22P47051 409 aa2.28□□□□□ -2.04
NIC96YFR002W IRC15Q02733 499 aa2.28□□□□□ -2.04
NIC96YFR002W SLM3Q12093 417 aa2.28□□□□□ -2.04
NIC96YFR002W YER078W-AQ3E7A2 54 aa2.28□□□□□ -2.04
NIC96YFR002W CDC60P26637 1090 aaKnown RBP2.27□□□□□ -2.05
NIC96YFR002W MSN2P33748 704 aa2.27□□□□□ -2.05
NIC96YFR002W TCM62P38228 572 aaKnown RBP2.27□□□□□ -2.05
NIC96YFR002W IPI3P53877 555 aa2.27□□□□□ -2.05
NIC96YFR002W CTI6Q08923 506 aa2.27□□□□□ -2.05
NIC96YFR002W NMD4Q12129 218 aa2.27□□□□□ -2.05
NIC96YFR002W LSP1Q12230 341 aaKnown RBP2.27□□□□□ -2.05
NIC96YFR002W NOP58Q12499 511 aaKnown RBP2.27□□□□□ -2.05
NIC96YFR002W YOL159C-AQ3E769 90 aa2.27□□□□□ -2.05
NIC96YFR002W YPT6Q99260 215 aa2.27□□□□□ -2.05
NIC96YFR002W EST1P17214 699 aaPredicted RBP2.27□□□□□ -2.05
NIC96YFR002W DUG2P38149 878 aa2.27□□□□□ -2.05
NIC96YFR002W SRO77P38163 1010 aa2.27□□□□□ -2.05
NIC96YFR002W RFS1P38234 210 aaKnown RBP2.27□□□□□ -2.05
NIC96YFR002W CAJ1P39101 391 aa2.27□□□□□ -2.05
NIC96YFR002W YEL057CP39983 233 aa2.27□□□□□ -2.05
NIC96YFR002W ARF3P40994 183 aaRIP-Chip data2.27□□□□□ -2.05not detected
NIC96YFR002W SHE10P53075 577 aa2.27□□□□□ -2.05
NIC96YFR002W VPS74Q06385 345 aa2.27□□□□□ -2.05
NIC96YFR002W YEH1Q07804 573 aa2.27□□□□□ -2.05
NIC96YFR002W THP1Q08231 455 aa2.27□□□□□ -2.05
NIC96YFR002W CFT2Q12102 859 aaPredicted RBP2.27□□□□□ -2.05
NIC96YFR002W UTP10P42945 1769 aaKnown RBP2.26□□□□□ -2.05
NIC96YFR002W LDB16P25587 256 aa2.26□□□□□ -2.05
NIC96YFR002W SHP1P34223 423 aa2.26□□□□□ -2.05
NIC96YFR002W DED81P38707 554 aaKnown RBP2.26□□□□□ -2.05
NIC96YFR002W MKT1P40850 830 aaKnown RBP2.26□□□□□ -2.05
NIC96YFR002W GWT1P47026 490 aa2.26□□□□□ -2.05
NIC96YFR002W YGL242CP53066 181 aa2.26□□□□□ -2.05
NIC96YFR002W TOF2Q02208 771 aa2.26□□□□□ -2.05
NIC96YFR002W RBS1Q05672 457 aaKnown RBP2.26□□□□□ -2.05
NIC96YFR002W PGC1Q08959 321 aa2.26□□□□□ -2.05
NIC96YFR002W SEC53P07283 254 aaKnown RBP2.26□□□□□ -2.05
NIC96YFR002W KRR1P25586 316 aaPredicted RBP2.26□□□□□ -2.05
NIC96YFR002W FUN19P28003 413 aaPredicted RBP2.26□□□□□ -2.05
NIC96YFR002W MRPL4P36517 319 aa2.26□□□□□ -2.05
NIC96YFR002W BNA4P38169 460 aa2.26□□□□□ -2.05
NIC96YFR002W FLC2P39719 783 aa2.26□□□□□ -2.05
NIC96YFR002W JEM1P40358 645 aa2.26□□□□□ -2.05
NIC96YFR002W SGN1P40561 250 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
NIC96YFR002W ALK1P43633 760 aaKnown RBP2.26□□□□□ -2.05
NIC96YFR002W IMD4P50094 524 aaKnown RBP2.26□□□□□ -2.05
NIC96YFR002W KEL3Q08979 651 aaPredicted RBP2.26□□□□□ -2.05
NIC96YFR002W HUA2Q12134 243 aa2.26□□□□□ -2.05
NIC96YFR002W RKM5Q12367 367 aa2.26□□□□□ -2.05
NIC96YFR002W LYS2P07702 1392 aa2.25□□□□□ -2.05
NIC96YFR002W CBS1P14066 229 aa2.25□□□□□ -2.05
NIC96YFR002W DBF4P32325 704 aa2.25□□□□□ -2.05
NIC96YFR002W SEF1P34228 1148 aa2.25□□□□□ -2.05
NIC96YFR002W RXT2P38255 430 aa2.25□□□□□ -2.05
NIC96YFR002W UTP9P38882 575 aaKnown RBP2.25□□□□□ -2.05
NIC96YFR002W ALG5P40350 334 aa2.25□□□□□ -2.05
NIC96YFR002W GPI1P53306 609 aa2.25□□□□□ -2.05
NIC96YFR002W ARK1P53974 638 aa2.25□□□□□ -2.05
NIC96YFR002W HEF3P53978 1044 aaKnown RBP2.25□□□□□ -2.05
NIC96YFR002W RPT6Q01939 405 aaKnown RBP2.25□□□□□ -2.05
NIC96YFR002W ADK2P26364 225 aa2.25□□□□□ -2.05
NIC96YFR002W GPI10P30777 616 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms