RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W RIP1P08067 215 aa2.13□□□□□ -2.07
VPS52YDR484W SPT15P13393 240 aaKnown RBP2.13□□□□□ -2.07
VPS52YDR484W SPS22P25380 463 aa2.13□□□□□ -2.07
VPS52YDR484W APE2P32454 952 aaKnown RBP2.13□□□□□ -2.07
VPS52YDR484W PAD1P33751 242 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
VPS52YDR484W SAS3P34218 831 aa2.13□□□□□ -2.07
VPS52YDR484W NTC20P38302 140 aaPredicted RBP2.13□□□□□ -2.07
VPS52YDR484W ESA1Q08649 445 aa2.13□□□□□ -2.07
VPS52YDR484W YLR108CQ12259 485 aa2.13□□□□□ -2.07
VPS52YDR484W RRP12Q12754 1228 aaKnown RBP2.13□□□□□ -2.07
VPS52YDR484W YOL159C-AQ3E769 90 aa2.13□□□□□ -2.07
VPS52YDR484W YER078W-AQ3E7A2 54 aa2.13□□□□□ -2.07
VPS52YDR484W SAM1P10659 382 aaKnown RBP2.12□□□□□ -2.07
VPS52YDR484W SRV2P17555 526 aaKnown RBP2.12□□□□□ -2.07
VPS52YDR484W SAM2P19358 384 aaKnown RBP2.12□□□□□ -2.07
VPS52YDR484W RPI1P23250 407 aaKnown RBP2.12□□□□□ -2.07
VPS52YDR484W DEG1P31115 442 aaKnown RBP2.12□□□□□ -2.07
VPS52YDR484W RML2P32611 393 aa2.12□□□□□ -2.07
VPS52YDR484W SDH3P33421 198 aa2.12□□□□□ -2.07
VPS52YDR484W YBL059WP34224 193 aa2.12□□□□□ -2.07
VPS52YDR484W YHR054CP38780 354 aa2.12□□□□□ -2.07
VPS52YDR484W SPG5P42933 373 aa2.12□□□□□ -2.07
VPS52YDR484W YIF1P53845 314 aaKnown RBP2.12□□□□□ -2.07
VPS52YDR484W SIL1Q08199 421 aa2.12□□□□□ -2.07
VPS52YDR484W THP3Q12049 470 aaKnown RBP2.12□□□□□ -2.07
VPS52YDR484W RRG1Q12167 365 aaPredicted RBP2.12□□□□□ -2.07
VPS52YDR484W PKH2Q12236 1081 aaKnown RBP2.12□□□□□ -2.07
VPS52YDR484W PGA3Q12746 312 aaKnown RBP2.12□□□□□ -2.07
VPS52YDR484W SUP35P05453 685 aaKnown RBP2.11□□□□□ -2.07
VPS52YDR484W CHS1P08004 1131 aa2.11□□□□□ -2.07
VPS52YDR484W TIP1P27654 210 aaPredicted RBP2.11□□□□□ -2.07
VPS52YDR484W YOX1P34161 385 aa2.11□□□□□ -2.07
VPS52YDR484W MIX23P38162 196 aa2.11□□□□□ -2.07
VPS52YDR484W NDT80P38830 627 aa2.11□□□□□ -2.07
VPS52YDR484W MST28P39552 234 aa2.11□□□□□ -2.07
VPS52YDR484W GPD2P41911 440 aaKnown RBP2.11□□□□□ -2.07
VPS52YDR484W COS5P47187 383 aa2.11□□□□□ -2.07
VPS52YDR484W YGL138CP53122 345 aa2.11□□□□□ -2.07
VPS52YDR484W BTN2P53286 410 aa2.11□□□□□ -2.07
VPS52YDR484W MDG1P53885 366 aa2.11□□□□□ -2.07
VPS52YDR484W YMR155WQ03795 547 aa2.11□□□□□ -2.07
VPS52YDR484W PBA1Q05778 276 aa2.11□□□□□ -2.07
VPS52YDR484W COS7Q07788 383 aa2.11□□□□□ -2.07
VPS52YDR484W REX4Q08237 289 aa2.11□□□□□ -2.07
VPS52YDR484W SGT1Q08446 395 aa2.11□□□□□ -2.07
VPS52YDR484W TIM18Q08749 192 aa2.11□□□□□ -2.07
VPS52YDR484W STB6P36085 766 aa2.11□□□□□ -2.07
VPS52YDR484W BYE1P36106 594 aa2.11□□□□□ -2.07
VPS52YDR484W RIB5P38145 238 aa2.11□□□□□ -2.07
VPS52YDR484W YIL067CP40514 678 aa2.11□□□□□ -2.07
VPS52YDR484W SAS2P40963 338 aa2.11□□□□□ -2.07
VPS52YDR484W SSU1P41930 458 aa2.11□□□□□ -2.07
VPS52YDR484W LAM5P43560 674 aa2.11□□□□□ -2.07
VPS52YDR484W YJR011CP47086 261 aaPredicted RBP2.11□□□□□ -2.07
VPS52YDR484W GOR1P53839 350 aa2.11□□□□□ -2.07
VPS52YDR484W YOR387CQ08910 206 aa2.11□□□□□ -2.07
VPS52YDR484W RAD61Q99359 647 aa2.11□□□□□ -2.07
VPS52YDR484W YRF1-4O13559 1382 aa2.1□□□□□ -2.07
VPS52YDR484W ARG4P04076 463 aaPredicted RBP2.1□□□□□ -2.07
VPS52YDR484W CPR4P25334 318 aa2.1□□□□□ -2.07
VPS52YDR484W KRE2P27809 442 aa2.1□□□□□ -2.07
VPS52YDR484W ARO2P28777 376 aaKnown RBP2.1□□□□□ -2.07
VPS52YDR484W SIN4P32259 974 aa2.1□□□□□ -2.07
VPS52YDR484W YME2P32843 850 aa2.1□□□□□ -2.07
VPS52YDR484W SDS24P38314 527 aa2.1□□□□□ -2.07
VPS52YDR484W LYS1P38998 373 aaRIP-Chip data2.1□□□□□ -2.07not detected
VPS52YDR484W RPS0BP46654 252 aaKnown RBP2.1□□□□□ -2.07
VPS52YDR484W YNR048WP53740 393 aa2.1□□□□□ -2.07
VPS52YDR484W ELP3Q02908 557 aaKnown RBP2.1□□□□□ -2.07
VPS52YDR484W YMR181CQ03231 154 aa2.1□□□□□ -2.07
VPS52YDR484W DON1Q05610 365 aa2.1□□□□□ -2.07
VPS52YDR484W YPR022CQ12139 1133 aa2.1□□□□□ -2.07
VPS52YDR484W VAM3Q12241 283 aa2.1□□□□□ -2.07
VPS52YDR484W ERV2Q12284 196 aa2.1□□□□□ -2.07
VPS52YDR484W SEC63P14906 663 aa2.09□□□□□ -2.07
VPS52YDR484W YCR051WP25631 222 aa2.09□□□□□ -2.07
VPS52YDR484W SWH1P35845 1188 aa2.09□□□□□ -2.07
VPS52YDR484W PIM1P36775 1133 aa2.09□□□□□ -2.07
VPS52YDR484W SLX1P38324 304 aa2.09□□□□□ -2.07
VPS52YDR484W RFC3P38629 340 aa2.09□□□□□ -2.07
VPS52YDR484W LSM5P40089 93 aaKnown RBP2.09□□□□□ -2.07
VPS52YDR484W OST1P41543 476 aaKnown RBP2.09□□□□□ -2.07
VPS52YDR484W YGR210CP42942 411 aa2.09□□□□□ -2.07
VPS52YDR484W WWM1P43582 211 aaKnown RBP2.09□□□□□ -2.07
VPS52YDR484W FRE4P53746 719 aa2.09□□□□□ -2.07
VPS52YDR484W KTR5P53966 522 aaPredicted RBP2.09□□□□□ -2.07
VPS52YDR484W SKO1Q02100 647 aa2.09□□□□□ -2.07
VPS52YDR484W KAP120Q02932 1032 aa2.09□□□□□ -2.07
VPS52YDR484W TSR1Q07381 788 aaKnown RBP2.09□□□□□ -2.07
VPS52YDR484W TEF1P02994 458 aaKnown RBP2.09□□□□□ -2.08
VPS52YDR484W LSB5P25369 354 aa2.09□□□□□ -2.08
VPS52YDR484W RHB1P25378 209 aa2.09□□□□□ -2.08
VPS52YDR484W NAM9P27929 486 aa2.09□□□□□ -2.08
VPS52YDR484W BEM1P29366 551 aa2.09□□□□□ -2.08
VPS52YDR484W MTC6P38849 526 aa2.09□□□□□ -2.08
VPS52YDR484W PTH1P38876 190 aaKnown RBP2.09□□□□□ -2.08
VPS52YDR484W HMS2P47175 358 aa2.09□□□□□ -2.08
VPS52YDR484W TOF1P53840 1238 aa2.09□□□□□ -2.08
VPS52YDR484W ARX1Q03862 593 aaKnown RBP2.09□□□□□ -2.08
VPS52YDR484W SMA2Q04658 369 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms