RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	YOR338W	Q99326	363 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	TIM9	O74700	87 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	RAS2	P01120	322 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	TAL1	P15019	335 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	APA1	P16550	321 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	KIN3	P22209	435 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	UBA1	P22515	1024 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	CMK2	P22517	447 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	CTR86	P25355	563 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	PUP3	P25451	205 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	ATP11	P32453	318 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	ZUO1	P32527	433 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	STE5	P32917	917 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	YBR241C	P38142	488 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	RBG1	P39729	369 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	EMP65	P40085	556 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	AYR1	P40471	297 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	YNL095C	P53932	642 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	MPS1	P54199	764 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	HXT15	P54854	567 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	YDR239C	Q03780	787 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	YHM2	Q04013	314 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	PEX12	Q04370	399 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	EMI1	Q04406	187 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	CIA1	Q05583	330 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	CLP1	Q08685	445 aa	Predicted RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	BUD7	Q08754	746 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	MLH3	Q12083	715 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	YPL245W	Q12179	454 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	RPN6	Q12377	434 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	PDH1	Q12428	516 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	LEU4	P06208	619 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	FUM1	P08417	488 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	RPS4A	P0CX35	261 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	RPS4B	P0CX36	261 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	KAR1	P11927	433 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	TYR1	P20049	452 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	SGV1	P23293	657 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	CRM1	P30822	1084 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	CYS4	P32582	507 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	RPS0A	P32905	252 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SUP35	YDR172W	RMA1	P36001	430 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	KAE1	P36132	386 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	SOL2	P37262	315 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	YBR138C	P38277	524 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	BMT2	P38278	337 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	HSE1	P38753	452 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	LRP1	P38801	184 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	RPH1	P39956	796 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	YJL070C	P40361	888 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	CAB2	P40506	365 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	FLC3	P53121	802 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	IMP4	P53941	290 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	MMT1	Q03218	510 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	YMR178W	Q03219	274 aa	Known RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	RAD30	Q04049	632 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	ECM11	Q04110	302 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	MRL1	Q06815	381 aa		4.55	□□□□□ -1.68
SUP35	YDR172W	PFK27	Q12471	397 aa	Predicted RBP	4.55	□□□□□ -1.68
SUP35	YDR172W	RPS9A	O13516	197 aa	Known RBP	4.54	□□□□□ -1.68
SUP35	YDR172W	MRP13	P12686	339 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	PEX3	P28795	441 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	AAR2	P32357	355 aa	Predicted RBP	4.54	□□□□□ -1.68
SUP35	YDR172W	ARP2	P32381	391 aa	Known RBP	4.54	□□□□□ -1.68
SUP35	YDR172W	TFB1	P32776	642 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	DUT1	P33317	147 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	ATG7	P38862	630 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	YER034W	P40022	185 aa	Known RBP	4.54	□□□□□ -1.68
SUP35	YDR172W	MEP1	P40260	492 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	GAB1	P41733	394 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	EMC2	P47133	292 aa	Known RBP	4.54	□□□□□ -1.68
SUP35	YDR172W	NNF1	P47149	201 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	DSL1	P53847	754 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	TMA20	P89886	181 aa	Predicted RBP	4.54	□□□□□ -1.68
SUP35	YDR172W	UGO1	Q03327	502 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	RSA3	Q05942	220 aa	Known RBP	4.54	□□□□□ -1.68
SUP35	YDR172W	FLC1	Q08967	793 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	YOR012W	Q12351	137 aa		4.54	□□□□□ -1.68
SUP35	YDR172W	RAD7	P06779	565 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	RAP1	P11938	827 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	MET8	P15807	274 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	DAP2	P18962	818 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	PRI2	P20457	528 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	EPT1	P22140	391 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	NFS1	P25374	497 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	DMC1	P25453	334 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	CDC5	P32562	705 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	YKL100C	P34248	587 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	NNK1	P36003	928 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	SPC34	P36131	295 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	COS111	P38308	924 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	DBP8	P38719	431 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	UBA4	P38820	440 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	AVT6	P40074	448 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	LSM5	P40089	93 aa	Known RBP	4.53	□□□□□ -1.68
SUP35	YDR172W	LAS21	P40367	830 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SUP35	YDR172W	SVL3	Q03088	825 aa	Known RBP	4.53	□□□□□ -1.68
SUP35	YDR172W	RPC11	Q04307	110 aa	Predicted RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms