RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C SEC39Q12745 709 aa2.36□□□□□ -2.03
ASM4YDL088C RHO2P06781 192 aa2.36□□□□□ -2.03
ASM4YDL088C HSP26P15992 214 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
ASM4YDL088C IDH2P28241 369 aaKnown RBP2.36□□□□□ -2.03
ASM4YDL088C KKQ8P36004 724 aa2.36□□□□□ -2.03
ASM4YDL088C THI2P38141 450 aa2.36□□□□□ -2.03
ASM4YDL088C YHR131CP38835 850 aa2.36□□□□□ -2.03
ASM4YDL088C RMD8P43620 662 aa2.36□□□□□ -2.03
ASM4YDL088C RMD9P53140 646 aaKnown RBP2.36□□□□□ -2.03
ASM4YDL088C RTS3P53289 263 aa2.36□□□□□ -2.03
ASM4YDL088C YDR387CQ04162 555 aa2.36□□□□□ -2.03
ASM4YDL088C SNX3Q08826 162 aaKnown RBP2.36□□□□□ -2.03
ASM4YDL088C AAC3P18238 307 aa2.35□□□□□ -2.03
ASM4YDL088C POP5P28005 173 aa2.35□□□□□ -2.03
ASM4YDL088C RAD14P28519 371 aa2.35□□□□□ -2.03
ASM4YDL088C GYP6P32806 458 aa2.35□□□□□ -2.03
ASM4YDL088C YMR181CQ03231 154 aa2.35□□□□□ -2.03
ASM4YDL088C FDH1Q08911 376 aa2.35□□□□□ -2.03
ASM4YDL088C SNT1P25357 1226 aa2.34□□□□□ -2.03
ASM4YDL088C APE2P32454 952 aaKnown RBP2.34□□□□□ -2.03
ASM4YDL088C MUD1P32605 298 aaKnown RBP2.34□□□□□ -2.03
ASM4YDL088C NOP16P40007 231 aaKnown RBP2.34□□□□□ -2.03
ASM4YDL088C ECM27P47144 725 aa2.34□□□□□ -2.03
ASM4YDL088C NUP2P32499 720 aa2.33□□□□□ -2.04
ASM4YDL088C ECM25P32525 599 aa2.33□□□□□ -2.04
ASM4YDL088C YGR149WP48236 432 aa2.33□□□□□ -2.04
ASM4YDL088C BRO1P48582 844 aa2.33□□□□□ -2.04
ASM4YDL088C TWF1P53250 332 aa2.33□□□□□ -2.04
ASM4YDL088C FRE4P53746 719 aa2.33□□□□□ -2.04
ASM4YDL088C YIF1P53845 314 aaKnown RBP2.33□□□□□ -2.04
ASM4YDL088C GCN4P03069 281 aa2.32□□□□□ -2.04
ASM4YDL088C RPI1P23250 407 aaKnown RBP2.32□□□□□ -2.04
ASM4YDL088C SPB1P25582 841 aaPredicted RBP2.32□□□□□ -2.04
ASM4YDL088C SIM1P40472 476 aa2.32□□□□□ -2.04
ASM4YDL088C VPS75P53853 264 aa2.32□□□□□ -2.04
ASM4YDL088C HSP31Q04432 237 aa2.32□□□□□ -2.04
ASM4YDL088C MRD1Q06106 887 aaKnown RBP2.32□□□□□ -2.04
ASM4YDL088C CUE5Q08412 411 aaKnown RBP2.32□□□□□ -2.04
ASM4YDL088C HIS4P00815 799 aaKnown RBP2.32□□□□□ -2.04
ASM4YDL088C TEF1P02994 458 aaKnown RBP2.32□□□□□ -2.04
ASM4YDL088C ARG4P04076 463 aaPredicted RBP2.32□□□□□ -2.04
ASM4YDL088C OLE1P21147 510 aaKnown RBP2.32□□□□□ -2.04
ASM4YDL088C ITR1P30605 584 aa2.32□□□□□ -2.04
ASM4YDL088C NPL6P32832 435 aa2.32□□□□□ -2.04
ASM4YDL088C VID24P38263 362 aa2.32□□□□□ -2.04
ASM4YDL088C MET28P40573 187 aa2.32□□□□□ -2.04
ASM4YDL088C RPT6Q01939 405 aaKnown RBP2.32□□□□□ -2.04
ASM4YDL088C IOC4Q04213 475 aa2.32□□□□□ -2.04
ASM4YDL088C YDR056CQ12025 205 aa2.32□□□□□ -2.04
ASM4YDL088C RRD2Q12461 358 aa2.32□□□□□ -2.04
ASM4YDL088C OCA4P25366 362 aa2.31□□□□□ -2.04
ASM4YDL088C YBR137WP38276 179 aa2.31□□□□□ -2.04
ASM4YDL088C LYS1P38998 373 aaRIP-Chip data2.31□□□□□ -2.04not detected
ASM4YDL088C GAB1P41733 394 aa2.31□□□□□ -2.04
ASM4YDL088C TFG2P41896 400 aaPredicted RBP2.31□□□□□ -2.04
ASM4YDL088C YJR085CP47131 105 aaKnown RBP2.31□□□□□ -2.04
ASM4YDL088C YLR278CQ05854 1341 aa2.31□□□□□ -2.04
ASM4YDL088C NAM2P11325 894 aa2.3□□□□□ -2.04
ASM4YDL088C NIP100P33420 868 aa2.3□□□□□ -2.04
ASM4YDL088C CMC1P36064 111 aa2.3□□□□□ -2.04
ASM4YDL088C AIM10P39965 576 aaKnown RBP2.3□□□□□ -2.04
ASM4YDL088C UTP18P40362 594 aaPredicted RBP2.3□□□□□ -2.04
ASM4YDL088C UPF3P48412 387 aaKnown RBP2.3□□□□□ -2.04
ASM4YDL088C YNR048WP53740 393 aa2.3□□□□□ -2.04
ASM4YDL088C YRM1Q12340 786 aa2.3□□□□□ -2.04
ASM4YDL088C FAB1P34756 2278 aa2.29□□□□□ -2.04
ASM4YDL088C CYC3P06182 269 aa2.29□□□□□ -2.04
ASM4YDL088C SPS4P09937 338 aa2.29□□□□□ -2.04
ASM4YDL088C PRP21P32524 280 aaPredicted RBP2.29□□□□□ -2.04
ASM4YDL088C CSE2P33308 149 aa2.29□□□□□ -2.04
ASM4YDL088C PMT1P33775 817 aa2.29□□□□□ -2.04
ASM4YDL088C YEL057CP39983 233 aa2.29□□□□□ -2.04
ASM4YDL088C SSU1P41930 458 aa2.29□□□□□ -2.04
ASM4YDL088C HXT14P42833 540 aa2.29□□□□□ -2.04
ASM4YDL088C ADA2Q02336 434 aa2.29□□□□□ -2.04
ASM4YDL088C TAP42Q04372 366 aa2.29□□□□□ -2.04
ASM4YDL088C REX4Q08237 289 aa2.29□□□□□ -2.04
ASM4YDL088C ATG29Q12092 213 aa2.29□□□□□ -2.04
ASM4YDL088C YHR054CP38780 354 aa2.28□□□□□ -2.04
ASM4YDL088C CCT2P39076 527 aaKnown RBP2.28□□□□□ -2.04
ASM4YDL088C ESL1P40456 1118 aa2.28□□□□□ -2.04
ASM4YDL088C DFG10P40526 253 aa2.28□□□□□ -2.04
ASM4YDL088C VTC2P43585 828 aa2.28□□□□□ -2.04
ASM4YDL088C KTR5P53966 522 aaPredicted RBP2.28□□□□□ -2.04
ASM4YDL088C GIR2Q03768 265 aaPredicted RBP2.28□□□□□ -2.04
ASM4YDL088C SGT1Q08446 395 aa2.28□□□□□ -2.04
ASM4YDL088C KAR9P32526 644 aa2.27□□□□□ -2.05
ASM4YDL088C VID27P40157 782 aa2.27□□□□□ -2.05
ASM4YDL088C HMS2P47175 358 aa2.27□□□□□ -2.05
ASM4YDL088C BET5Q03630 159 aa2.27□□□□□ -2.05
ASM4YDL088C VHS1Q03785 461 aa2.27□□□□□ -2.05
ASM4YDL088C RML2P32611 393 aa2.27□□□□□ -2.05
ASM4YDL088C VHC1P38329 1120 aa2.27□□□□□ -2.05
ASM4YDL088C YBL111CQ3E7Y5 667 aa2.27□□□□□ -2.05
ASM4YDL088C GFD2P25370 566 aaKnown RBP2.26□□□□□ -2.05
ASM4YDL088C SEC66P33754 206 aa2.26□□□□□ -2.05
ASM4YDL088C MIG3P39943 394 aa2.26□□□□□ -2.05
ASM4YDL088C MDE1P47095 244 aa2.26□□□□□ -2.05
ASM4YDL088C AZR1P50080 613 aa2.26□□□□□ -2.05
ASM4YDL088C ARE2P53629 642 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms