RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W ERG1P32476 496 aaKnown RBP3.08□□□□□ -1.92
MSH2YOL090W HIR2P32480 875 aa3.08□□□□□ -1.92
MSH2YOL090W KKQ8P36004 724 aa3.08□□□□□ -1.92
MSH2YOL090W ECM4P36156 370 aa3.08□□□□□ -1.92
MSH2YOL090W SIP3P38717 1229 aa3.08□□□□□ -1.92
MSH2YOL090W PTC7P38797 343 aa3.08□□□□□ -1.92
MSH2YOL090W HRB1P38922 454 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
MSH2YOL090W YMR147WP40218 223 aaKnown RBP3.08□□□□□ -1.92
MSH2YOL090W OPT1P40897 799 aa3.08□□□□□ -1.92
MSH2YOL090W CTH1P47976 325 aa3.08□□□□□ -1.92
MSH2YOL090W MRK1P50873 501 aa3.08□□□□□ -1.92
MSH2YOL090W VPS73P53142 486 aaKnown RBP3.08□□□□□ -1.92
MSH2YOL090W KTR6P54070 446 aa3.08□□□□□ -1.92
MSH2YOL090W RPS15Q01855 142 aaKnown RBP3.08□□□□□ -1.92
MSH2YOL090W MRPS17Q03246 237 aaPredicted RBP3.08□□□□□ -1.92
MSH2YOL090W EKI1Q03764 534 aa3.08□□□□□ -1.92
MSH2YOL090W SSY1Q03770 852 aa3.08□□□□□ -1.92
MSH2YOL090W IZH3Q07959 543 aa3.08□□□□□ -1.92
MSH2YOL090W PKH2Q12236 1081 aaKnown RBP3.08□□□□□ -1.92
MSH2YOL090W MDM20Q12387 796 aaKnown RBP3.08□□□□□ -1.92
MSH2YOL090W ZPS1Q12512 249 aa3.08□□□□□ -1.92
MSH2YOL090W AI5_ALPHAQ9ZZX1 630 aa3.08□□□□□ -1.92
MSH2YOL090W RTC1Q08281 1341 aa3.08□□□□□ -1.92
MSH2YOL090W YPR089WO13585 888 aa3.07□□□□□ -1.92
MSH2YOL090W AI1P03875 834 aa3.07□□□□□ -1.92
MSH2YOL090W GAL10P04397 699 aa3.07□□□□□ -1.92
MSH2YOL090W CDC36P06100 191 aaPredicted RBP3.07□□□□□ -1.92
MSH2YOL090W TRM2P33753 639 aa3.07□□□□□ -1.92
MSH2YOL090W NUP133P36161 1157 aa3.07□□□□□ -1.92
MSH2YOL090W AAP1P37898 856 aaKnown RBP3.07□□□□□ -1.92
MSH2YOL090W SWC5P38326 303 aa3.07□□□□□ -1.92
MSH2YOL090W MSR1P38714 643 aa3.07□□□□□ -1.92
MSH2YOL090W ELO1P39540 310 aa3.07□□□□□ -1.92
MSH2YOL090W AIM22P47051 409 aa3.07□□□□□ -1.92
MSH2YOL090W CAF130P53280 1122 aaPredicted RBP3.07□□□□□ -1.92
MSH2YOL090W YNL092WP53934 400 aa3.07□□□□□ -1.92
MSH2YOL090W PNG1Q02890 363 aa3.07□□□□□ -1.92
MSH2YOL090W MDM30Q05930 598 aa3.07□□□□□ -1.92
MSH2YOL090W YLR455WQ06188 304 aa3.07□□□□□ -1.92
MSH2YOL090W DIA2Q08496 732 aaPredicted RBP3.07□□□□□ -1.92
MSH2YOL090W TGS1Q12052 315 aa3.07□□□□□ -1.92
MSH2YOL090W YOL107WQ12239 342 aa3.07□□□□□ -1.92
MSH2YOL090W VAM3Q12241 283 aa3.07□□□□□ -1.92
MSH2YOL090W AHC1Q12433 566 aa3.07□□□□□ -1.92
MSH2YOL090W CYC1P00044 109 aaPredicted RBP3.07□□□□□ -1.92
MSH2YOL090W RPL31BP0C2H9 113 aaKnown RBP3.07□□□□□ -1.92
MSH2YOL090W SEC15P22224 910 aa3.07□□□□□ -1.92
MSH2YOL090W PDE1P22434 369 aa3.07□□□□□ -1.92
MSH2YOL090W BOS1P25385 244 aa3.07□□□□□ -1.92
MSH2YOL090W CDC5P32562 705 aa3.07□□□□□ -1.92
MSH2YOL090W SRB4P32569 687 aa3.07□□□□□ -1.92
MSH2YOL090W SUA5P32579 426 aa3.07□□□□□ -1.92
MSH2YOL090W CBF5P33322 483 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
MSH2YOL090W TAE1P38340 232 aa3.07□□□□□ -1.92
MSH2YOL090W SAF1P38352 637 aa3.07□□□□□ -1.92
MSH2YOL090W DIA4P38705 446 aaPredicted RBP3.07□□□□□ -1.92
MSH2YOL090W FUN12P39730 1002 aaKnown RBP3.07□□□□□ -1.92
MSH2YOL090W SHQ1P40486 507 aaPredicted RBP3.07□□□□□ -1.92
MSH2YOL090W URB2P47108 1174 aa3.07□□□□□ -1.92
MSH2YOL090W YGR126WP53274 230 aa3.07□□□□□ -1.92
MSH2YOL090W SLG1P54867 378 aa3.07□□□□□ -1.92
MSH2YOL090W YPL062WQ02781 134 aa3.07□□□□□ -1.92
MSH2YOL090W CTK1Q03957 528 aaKnown RBP3.07□□□□□ -1.92
MSH2YOL090W ATC1Q04005 294 aa3.07□□□□□ -1.92
MSH2YOL090W SSQ1Q05931 657 aaPredicted RBP3.07□□□□□ -1.92
MSH2YOL090W DCS1Q06151 350 aa3.07□□□□□ -1.92
MSH2YOL090W LAS17Q12446 633 aa3.07□□□□□ -1.92
MSH2YOL090W YER175W-AQ8TGU4 54 aa3.07□□□□□ -1.92
MSH2YOL090W MTR10Q99189 972 aa3.07□□□□□ -1.92
MSH2YOL090W POM152P39685 1337 aa3.07□□□□□ -1.92
MSH2YOL090W KRS1P15180 591 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W ALG1P16661 449 aa3.06□□□□□ -1.92
MSH2YOL090W IMG1P25626 169 aa3.06□□□□□ -1.92
MSH2YOL090W HES1P35843 434 aa3.06□□□□□ -1.92
MSH2YOL090W SNU114P36048 1008 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W YKL023WP36103 277 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W YKR073CP36153 106 aa3.06□□□□□ -1.92
MSH2YOL090W YPT10P38146 199 aa3.06□□□□□ -1.92
MSH2YOL090W PIH1P38768 344 aa3.06□□□□□ -1.92
MSH2YOL090W GPI16P38875 610 aa3.06□□□□□ -1.92
MSH2YOL090W YHR210CP38893 341 aa3.06□□□□□ -1.92
MSH2YOL090W YER085CP40058 173 aa3.06□□□□□ -1.92
MSH2YOL090W LSB3P43603 459 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W CHA4P43634 648 aa3.06□□□□□ -1.92
MSH2YOL090W TRF5P48561 642 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W HEF3P53978 1044 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W PET117Q02771 107 aa3.06□□□□□ -1.92
MSH2YOL090W SRL4Q03085 281 aa3.06□□□□□ -1.92
MSH2YOL090W RSN1Q03516 953 aa3.06□□□□□ -1.92
MSH2YOL090W CAB5Q03941 241 aa3.06□□□□□ -1.92
MSH2YOL090W RTN1Q04947 295 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W DIS3Q08162 1001 aaKnown RBP3.06□□□□□ -1.92
MSH2YOL090W SMC5Q08204 1093 aa3.06□□□□□ -1.92
MSH2YOL090W HMI1Q12039 706 aa3.06□□□□□ -1.92
MSH2YOL090W CDC15P27636 974 aa3.06□□□□□ -1.92
MSH2YOL090W CNE1P27825 502 aa3.06□□□□□ -1.92
MSH2YOL090W YKR015CP36111 568 aa3.06□□□□□ -1.92
MSH2YOL090W STV1P37296 890 aa3.06□□□□□ -1.92
MSH2YOL090W ERG7P38604 731 aa3.06□□□□□ -1.92
MSH2YOL090W YHR045WP38775 560 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms