RNA–Protein interactions for RNA: YNL093W

YPT53, Transcript of Stress-induced Rab family GTPase, yeastyeast

Gene YPT53, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT53YNL093W DUS4Q06063 367 aa3.94□□□□□ -1.78
YPT53YNL093W VPS36Q06696 566 aa3.94□□□□□ -1.78
YPT53YNL093W VAM6Q07468 1049 aa3.94□□□□□ -1.78
YPT53YNL093W YFH1Q07540 174 aa3.94□□□□□ -1.78
YPT53YNL093W YDL144CQ07589 356 aa3.94□□□□□ -1.78
YPT53YNL093W DTD1Q07648 150 aaKnown RBP3.94□□□□□ -1.78
YPT53YNL093W RTT109Q07794 436 aa3.94□□□□□ -1.78
YPT53YNL093W YOL019WQ08157 551 aa3.94□□□□□ -1.78
YPT53YNL093W UAF30Q08747 228 aa3.94□□□□□ -1.78
YPT53YNL093W GPB1Q08886 897 aa3.94□□□□□ -1.78
YPT53YNL093W RSA1Q08932 381 aa3.94□□□□□ -1.78
YPT53YNL093W GRE1Q08969 168 aa3.94□□□□□ -1.78
YPT53YNL093W AKR2Q12013 749 aa3.94□□□□□ -1.78
YPT53YNL093W DAP1Q12091 152 aa3.94□□□□□ -1.78
YPT53YNL093W TSC11P40061 1430 aa3.94□□□□□ -1.78
YPT53YNL093W TDH2P00358 332 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W TDH3P00359 332 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
YPT53YNL093W PMA1P05030 918 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W ILV5P06168 395 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W RPS24AP0CX31 135 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W RPS24BP0CX32 135 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W RIT1P23796 513 aa3.93□□□□□ -1.78
YPT53YNL093W DBR1P24309 405 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W YSC84P32793 468 aa3.93□□□□□ -1.78
YPT53YNL093W REC104P33323 182 aa3.93□□□□□ -1.78
YPT53YNL093W EMC3P36039 253 aa3.93□□□□□ -1.78
YPT53YNL093W KTR3P38130 404 aaPredicted RBP3.93□□□□□ -1.78
YPT53YNL093W THI2P38141 450 aa3.93□□□□□ -1.78
YPT53YNL093W CST26P38226 397 aa3.93□□□□□ -1.78
YPT53YNL093W STP2P38704 541 aa3.93□□□□□ -1.78
YPT53YNL093W SHU2P38957 223 aa3.93□□□□□ -1.78
YPT53YNL093W PRP39P39682 629 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W SEN34P39707 275 aa3.93□□□□□ -1.78
YPT53YNL093W GPB2P39717 880 aa3.93□□□□□ -1.78
YPT53YNL093W IST3P40565 148 aaPredicted RBP3.93□□□□□ -1.78
YPT53YNL093W VMA13P41807 478 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W UFE1P41834 346 aa3.93□□□□□ -1.78
YPT53YNL093W YGR066CP53242 292 aa3.93□□□□□ -1.78
YPT53YNL093W RPT4P53549 437 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W RCF2P53721 224 aa3.93□□□□□ -1.78
YPT53YNL093W NOP13P53883 403 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
YPT53YNL093W NUP116Q02630 1113 aa3.93□□□□□ -1.78
YPT53YNL093W NGL2Q03264 515 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W SLD5Q03406 294 aa3.93□□□□□ -1.78
YPT53YNL093W EBS1Q03466 884 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W ROT1Q03691 256 aa3.93□□□□□ -1.78
YPT53YNL093W UBX2Q04228 584 aa3.93□□□□□ -1.78
YPT53YNL093W YLR040CQ07988 224 aa3.93□□□□□ -1.78
YPT53YNL093W XYL2Q07993 356 aa3.93□□□□□ -1.78
YPT53YNL093W HRK1Q08732 759 aaKnown RBP3.93□□□□□ -1.78
YPT53YNL093W RDR1Q08904 546 aa3.93□□□□□ -1.78
YPT53YNL093W OSW2Q12202 724 aa3.93□□□□□ -1.78
YPT53YNL093W FMP16Q12497 93 aa3.93□□□□□ -1.78
YPT53YNL093W SNT2P53127 1403 aa3.93□□□□□ -1.78
YPT53YNL093W CYC1P00044 109 aaPredicted RBP3.92□□□□□ -1.78
YPT53YNL093W CDC21P06785 304 aa3.92□□□□□ -1.78
YPT53YNL093W DFR1P07807 211 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
YPT53YNL093W YEL076C-AP0CX16 216 aa3.92□□□□□ -1.78
YPT53YNL093W YLR464WP0CX17 216 aa3.92□□□□□ -1.78
YPT53YNL093W MATALPHA1P0CY06 175 aa3.92□□□□□ -1.78
YPT53YNL093W HMLALPHA1P0CY07 175 aa3.92□□□□□ -1.78
YPT53YNL093W RPL3P14126 387 aaKnown RBP3.92□□□□□ -1.78
YPT53YNL093W SNA3P14359 133 aa3.92□□□□□ -1.78
YPT53YNL093W DBP5P20449 482 aaKnown RBP3.92□□□□□ -1.78
YPT53YNL093W HSP30P25619 332 aa3.92□□□□□ -1.78
YPT53YNL093W ADE1P27616 306 aa3.92□□□□□ -1.78
YPT53YNL093W CIN8P27895 1000 aa3.92□□□□□ -1.78
YPT53YNL093W PEX3P28795 441 aa3.92□□□□□ -1.78
YPT53YNL093W CYS3P31373 394 aaKnown RBP3.92□□□□□ -1.78
YPT53YNL093W SYN8P31377 255 aa3.92□□□□□ -1.78
YPT53YNL093W TYE7P33122 291 aaPredicted RBP3.92□□□□□ -1.78
YPT53YNL093W YPT53P36019 220 aa3.92□□□□□ -1.78
YPT53YNL093W DOA1P36037 715 aa3.92□□□□□ -1.78
YPT53YNL093W SLM4P38247 162 aa3.92□□□□□ -1.78
YPT53YNL093W SWC5P38326 303 aa3.92□□□□□ -1.78
YPT53YNL093W SFB3P38810 929 aa3.92□□□□□ -1.78
YPT53YNL093W YEL076CP39971 216 aa3.92□□□□□ -1.78
YPT53YNL093W VID28P40547 921 aa3.92□□□□□ -1.78
YPT53YNL093W TFG2P41896 400 aaPredicted RBP3.92□□□□□ -1.78
YPT53YNL093W YJL107CP42947 387 aa3.92□□□□□ -1.78
YPT53YNL093W IRC5P43610 853 aa3.92□□□□□ -1.78
YPT53YNL093W YJL132WP47014 750 aa3.92□□□□□ -1.78
YPT53YNL093W YJR154WP47181 346 aa3.92□□□□□ -1.78
YPT53YNL093W DIA3P52290 468 aa3.92□□□□□ -1.78
YPT53YNL093W COG1P53079 417 aa3.92□□□□□ -1.78
YPT53YNL093W VOA1P53262 265 aa3.92□□□□□ -1.78
YPT53YNL093W NOG2P53742 486 aaKnown RBP3.92□□□□□ -1.78
YPT53YNL093W RPA49Q01080 415 aaPredicted RBP3.92□□□□□ -1.78
YPT53YNL093W YDC1Q02896 317 aa3.92□□□□□ -1.78
YPT53YNL093W USA1Q03714 838 aa3.92□□□□□ -1.78
YPT53YNL093W YDR239CQ03780 787 aa3.92□□□□□ -1.78
YPT53YNL093W YDR248CQ03786 193 aa3.92□□□□□ -1.78
YPT53YNL093W PPN1Q04119 674 aa3.92□□□□□ -1.78
YPT53YNL093W MYO5Q04439 1219 aaKnown RBP3.92□□□□□ -1.78
YPT53YNL093W RCO1Q04779 684 aa3.92□□□□□ -1.78
YPT53YNL093W BCH1Q05029 724 aa3.92□□□□□ -1.78
YPT53YNL093W RQC1Q05468 723 aaKnown RBP3.92□□□□□ -1.78
YPT53YNL093W SPO77Q06134 477 aa3.92□□□□□ -1.78
YPT53YNL093W RSB1Q08417 382 aa3.92□□□□□ -1.78
YPT53YNL093W GPM2Q12008 311 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms