RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C PEX27Q08580 376 aa4.74□□□□□ -1.65
CAF4YKR036C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
CAF4YKR036C HAL9Q12180 1030 aa4.74□□□□□ -1.65
CAF4YKR036C YGK3Q12222 375 aaPredicted RBP4.74□□□□□ -1.65
CAF4YKR036C TY1A-DR3Q12441 440 aa4.74□□□□□ -1.65
CAF4YKR036C CBP2P03874 630 aaPredicted RBP4.73□□□□□ -1.65
CAF4YKR036C ARO3P14843 370 aaKnown RBP4.73□□□□□ -1.65
CAF4YKR036C CHL1P22516 861 aaPredicted RBP4.73□□□□□ -1.65
CAF4YKR036C YCR015CP25616 317 aa4.73□□□□□ -1.65
CAF4YKR036C ARO7P32178 256 aa4.73□□□□□ -1.65
CAF4YKR036C DPH2P32461 534 aa4.73□□□□□ -1.65
CAF4YKR036C FRE1P32791 686 aa4.73□□□□□ -1.65
CAF4YKR036C VPS17P32913 551 aa4.73□□□□□ -1.65
CAF4YKR036C CSE2P33308 149 aa4.73□□□□□ -1.65
CAF4YKR036C MRPL3P36516 390 aa4.73□□□□□ -1.65
CAF4YKR036C ROT2P38138 954 aa4.73□□□□□ -1.65
CAF4YKR036C NMD3P38861 518 aaKnown RBP4.73□□□□□ -1.65
CAF4YKR036C AIM2P39721 246 aa4.73□□□□□ -1.65
CAF4YKR036C PCL6P40038 420 aa4.73□□□□□ -1.65
CAF4YKR036C CAF16P43569 289 aa4.73□□□□□ -1.65
CAF4YKR036C PYK2P52489 506 aaKnown RBP4.73□□□□□ -1.65
CAF4YKR036C SOK2P53438 785 aaPredicted RBP4.73□□□□□ -1.65
CAF4YKR036C SPC98P53540 846 aa4.73□□□□□ -1.65
CAF4YKR036C NMA111P53920 997 aa4.73□□□□□ -1.65
CAF4YKR036C MTD1Q02046 320 aaKnown RBP4.73□□□□□ -1.65
CAF4YKR036C ARL3Q02804 198 aa4.73□□□□□ -1.65
CAF4YKR036C VHS1Q03785 461 aa4.73□□□□□ -1.65
CAF4YKR036C NEJ1Q06148 342 aa4.73□□□□□ -1.65
CAF4YKR036C JIP5Q06214 492 aaPredicted RBP4.73□□□□□ -1.65
CAF4YKR036C SLD7Q08457 257 aa4.73□□□□□ -1.65
CAF4YKR036C OSW2Q12202 724 aa4.73□□□□□ -1.65
CAF4YKR036C RBD2Q12270 262 aa4.73□□□□□ -1.65
CAF4YKR036C PST2Q12335 198 aaKnown RBP4.73□□□□□ -1.65
CAF4YKR036C ARG81P05085 880 aa4.72□□□□□ -1.65
CAF4YKR036C CBP6P07253 162 aaPredicted RBP4.72□□□□□ -1.65
CAF4YKR036C PHO91P27514 894 aa4.72□□□□□ -1.65
CAF4YKR036C DBF20P32328 564 aa4.72□□□□□ -1.65
CAF4YKR036C BIO2P32451 375 aa4.72□□□□□ -1.65
CAF4YKR036C CDC13P32797 924 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C COT1P32798 439 aa4.72□□□□□ -1.65
CAF4YKR036C PTM1P32857 523 aa4.72□□□□□ -1.65
CAF4YKR036C MRPL6P32904 214 aa4.72□□□□□ -1.65
CAF4YKR036C YKL077WP36081 392 aa4.72□□□□□ -1.65
CAF4YKR036C OSH7P38755 437 aa4.72□□□□□ -1.65
CAF4YKR036C BFR1P38934 470 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
CAF4YKR036C XDJ1P39102 459 aa4.72□□□□□ -1.65
CAF4YKR036C ACO2P39533 789 aa4.72□□□□□ -1.65
CAF4YKR036C PTI1P39927 425 aaPredicted RBP4.72□□□□□ -1.65
CAF4YKR036C MOB1P40484 314 aa4.72□□□□□ -1.65
CAF4YKR036C RPS12P48589 143 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C SCW11P53189 542 aa4.72□□□□□ -1.65
CAF4YKR036C POP6P53218 158 aa4.72□□□□□ -1.65
CAF4YKR036C YGR168CP53293 376 aa4.72□□□□□ -1.65
CAF4YKR036C OKP1P53298 406 aa4.72□□□□□ -1.65
CAF4YKR036C CWC24P53769 259 aa4.72□□□□□ -1.65
CAF4YKR036C MRPS16Q02608 121 aa4.72□□□□□ -1.65
CAF4YKR036C SMA1Q02651 245 aa4.72□□□□□ -1.65
CAF4YKR036C MAK3Q03503 176 aa4.72□□□□□ -1.65
CAF4YKR036C TRM12Q04235 462 aa4.72□□□□□ -1.65
CAF4YKR036C PEX12Q04370 399 aa4.72□□□□□ -1.65
CAF4YKR036C YLR283WQ05867 314 aa4.72□□□□□ -1.65
CAF4YKR036C ECM38Q05902 660 aaPredicted RBP4.72□□□□□ -1.65
CAF4YKR036C EAF1Q06337 982 aa4.72□□□□□ -1.65
CAF4YKR036C PHO92Q06390 306 aa4.72□□□□□ -1.65
CAF4YKR036C MRI1Q06489 411 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C HDA3Q06623 655 aa4.72□□□□□ -1.65
CAF4YKR036C MHR1Q06630 226 aa4.72□□□□□ -1.65
CAF4YKR036C GPI11Q06636 219 aa4.72□□□□□ -1.65
CAF4YKR036C TPO1Q07824 586 aa4.72□□□□□ -1.65
CAF4YKR036C FRE5Q08908 694 aa4.72□□□□□ -1.65
CAF4YKR036C YRR1Q12172 810 aa4.72□□□□□ -1.65
CAF4YKR036C YOR022CQ12204 715 aa4.72□□□□□ -1.65
CAF4YKR036C RIB3Q99258 208 aa4.72□□□□□ -1.65
CAF4YKR036C SUC2P00724 532 aa4.72□□□□□ -1.65
CAF4YKR036C ADE4P04046 510 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C LAT1P12695 482 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C GLN3P18494 730 aa4.72□□□□□ -1.65
CAF4YKR036C PTP1P25044 335 aa4.72□□□□□ -1.65
CAF4YKR036C SAT4P25333 603 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C RSA4P25382 515 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C IMG2P25642 146 aaPredicted RBP4.72□□□□□ -1.65
CAF4YKR036C HRR25P29295 494 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C ITR1P30605 584 aa4.72□□□□□ -1.65
CAF4YKR036C FUN30P31380 1131 aa4.72□□□□□ -1.65
CAF4YKR036C BEM3P32873 1128 aa4.72□□□□□ -1.65
CAF4YKR036C MRT4P33201 236 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C SDS22P36047 338 aa4.72□□□□□ -1.65
CAF4YKR036C SIF2P38262 535 aa4.72□□□□□ -1.65
CAF4YKR036C SAF1P38352 637 aa4.72□□□□□ -1.65
CAF4YKR036C PRS2P38620 318 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C OTU2P38747 307 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C VRG4P40107 337 aa4.72□□□□□ -1.65
CAF4YKR036C MAD2P40958 196 aa4.72□□□□□ -1.65
CAF4YKR036C SPT20P50875 604 aa4.72□□□□□ -1.65
CAF4YKR036C PPT1P53043 513 aa4.72□□□□□ -1.65
CAF4YKR036C RTT102P53330 157 aa4.72□□□□□ -1.65
CAF4YKR036C HHO1P53551 258 aa4.72□□□□□ -1.65
CAF4YKR036C INN1P53901 409 aa4.72□□□□□ -1.65
CAF4YKR036C REG1Q00816 1014 aa4.72□□□□□ -1.65
CAF4YKR036C STP1Q00947 519 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms