RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YGR149WP48236 432 aa2.33□□□□□ -2.04
SNU114YKL173W IMD3P50095 523 aaKnown RBP2.33□□□□□ -2.04
SNU114YKL173W CRT10Q08226 957 aa2.33□□□□□ -2.04
SNU114YKL173W FRE3Q08905 711 aa2.33□□□□□ -2.04
SNU114YKL173W UBX3Q12229 455 aa2.33□□□□□ -2.04
SNU114YKL173W ICT1Q12385 394 aa2.33□□□□□ -2.04
SNU114YKL173W IQG1Q12280 1495 aa2.33□□□□□ -2.04
SNU114YKL173W GPA1P08539 472 aa2.33□□□□□ -2.04
SNU114YKL173W RPL31BP0C2H9 113 aaKnown RBP2.33□□□□□ -2.04
SNU114YKL173W TKL1P23254 680 aaKnown RBP2.33□□□□□ -2.04
SNU114YKL173W MTR2P34232 184 aaKnown RBP2.33□□□□□ -2.04
SNU114YKL173W HCS1P34243 683 aa2.33□□□□□ -2.04
SNU114YKL173W YER034WP40022 185 aaKnown RBP2.33□□□□□ -2.04
SNU114YKL173W UBX6P47049 396 aa2.33□□□□□ -2.04
SNU114YKL173W COS5P47187 383 aa2.33□□□□□ -2.04
SNU114YKL173W HOP2P53187 214 aa2.33□□□□□ -2.04
SNU114YKL173W RPT4P53549 437 aaKnown RBP2.33□□□□□ -2.04
SNU114YKL173W EAF7P53911 425 aaKnown RBP2.33□□□□□ -2.04
SNU114YKL173W ABZ2Q03266 374 aa2.33□□□□□ -2.04
SNU114YKL173W CWC21Q03375 135 aaKnown RBP2.33□□□□□ -2.04
SNU114YKL173W COS7Q07788 383 aa2.33□□□□□ -2.04
SNU114YKL173W CLP1Q08685 445 aaPredicted RBP2.33□□□□□ -2.04
SNU114YKL173W LEA1Q08963 238 aaPredicted RBP2.33□□□□□ -2.04
SNU114YKL173W USO1P25386 1790 aa2.33□□□□□ -2.04
SNU114YKL173W STF1P01098 86 aa2.32□□□□□ -2.04
SNU114YKL173W PEP4P07267 405 aaKnown RBP2.32□□□□□ -2.04
SNU114YKL173W FAA1P30624 700 aaKnown RBP2.32□□□□□ -2.04
SNU114YKL173W SOF1P33750 489 aaKnown RBP2.32□□□□□ -2.04
SNU114YKL173W RPC37P36121 282 aa2.32□□□□□ -2.04
SNU114YKL173W CTM1P38818 585 aa2.32□□□□□ -2.04
SNU114YKL173W MBB1P39534 108 aa2.32□□□□□ -2.04
SNU114YKL173W ULP2P40537 1034 aaPredicted RBP2.32□□□□□ -2.04
SNU114YKL173W CHS6P40955 746 aa2.32□□□□□ -2.04
SNU114YKL173W FAR3P46671 204 aa2.32□□□□□ -2.04
SNU114YKL173W YJL132WP47014 750 aa2.32□□□□□ -2.04
SNU114YKL173W YGL108CP53139 140 aa2.32□□□□□ -2.04
SNU114YKL173W PKP2P53170 491 aa2.32□□□□□ -2.04
SNU114YKL173W COG2P53271 262 aa2.32□□□□□ -2.04
SNU114YKL173W IST1P53843 298 aaPredicted RBP2.32□□□□□ -2.04
SNU114YKL173W YPL068CQ02749 293 aa2.32□□□□□ -2.04
SNU114YKL173W ATG38Q05789 226 aaKnown RBP2.32□□□□□ -2.04
SNU114YKL173W YLR455WQ06188 304 aa2.32□□□□□ -2.04
SNU114YKL173W YML002WP0CF17 737 aa2.32□□□□□ -2.04
SNU114YKL173W CLB2P24869 491 aa2.32□□□□□ -2.04
SNU114YKL173W PHO84P25297 587 aaKnown RBP2.32□□□□□ -2.04
SNU114YKL173W SMY1P32364 656 aaKnown RBP2.32□□□□□ -2.04
SNU114YKL173W RPC34P32910 317 aa2.32□□□□□ -2.04
SNU114YKL173W BUD2P33314 1104 aa2.32□□□□□ -2.04
SNU114YKL173W PFF1P38244 976 aa2.32□□□□□ -2.04
SNU114YKL173W PCA1P38360 1216 aa2.32□□□□□ -2.04
SNU114YKL173W FAD1P38913 306 aa2.32□□□□□ -2.04
SNU114YKL173W AGX1P43567 385 aa2.32□□□□□ -2.04
SNU114YKL173W ATG27P46989 271 aa2.32□□□□□ -2.04
SNU114YKL173W KEL2P50090 882 aa2.32□□□□□ -2.04
SNU114YKL173W VPS54Q12071 889 aa2.32□□□□□ -2.04
SNU114YKL173W JIP3O13555 125 aa2.31□□□□□ -2.04
SNU114YKL173W RPC40P07703 335 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W RIP1P08067 215 aa2.31□□□□□ -2.04
SNU114YKL173W YER190C-BP0CX94 160 aa2.31□□□□□ -2.04
SNU114YKL173W YEL077W-AP0CX95 160 aa2.31□□□□□ -2.04
SNU114YKL173W YGR296C-BP0CX96 160 aa2.31□□□□□ -2.04
SNU114YKL173W YPL283W-BP0CX97 160 aa2.31□□□□□ -2.04
SNU114YKL173W YPR204C-AP0CX98 160 aa2.31□□□□□ -2.04
SNU114YKL173W CLC1P17891 233 aa2.31□□□□□ -2.04
SNU114YKL173W PRP2P20095 876 aaPredicted RBP2.31□□□□□ -2.04
SNU114YKL173W ZTA1P38230 334 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W PEX18P38855 283 aa2.31□□□□□ -2.04
SNU114YKL173W LAS21P40367 830 aa2.31□□□□□ -2.04
SNU114YKL173W VHS2P40463 436 aa2.31□□□□□ -2.04
SNU114YKL173W HXT9P40885 567 aa2.31□□□□□ -2.04
SNU114YKL173W ELP2P42935 788 aa2.31□□□□□ -2.04
SNU114YKL173W CAF130P53280 1122 aaPredicted RBP2.31□□□□□ -2.04
SNU114YKL173W RSC9Q03124 581 aa2.31□□□□□ -2.04
SNU114YKL173W MLH2Q07980 695 aa2.31□□□□□ -2.04
SNU114YKL173W RKM1Q08961 583 aaPredicted RBP2.31□□□□□ -2.04
SNU114YKL173W YIL002W-AQ3E7Z5 69 aa2.31□□□□□ -2.04
SNU114YKL173W DRS2P39524 1355 aa2.31□□□□□ -2.04
SNU114YKL173W ILV2P07342 687 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W OM45P16547 393 aa2.31□□□□□ -2.04
SNU114YKL173W SUI2P20459 304 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W NUP1P20676 1076 aa2.31□□□□□ -2.04
SNU114YKL173W BUD5P25300 642 aaPredicted RBP2.31□□□□□ -2.04
SNU114YKL173W EFB1P32471 206 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W TMT1P32643 299 aa2.31□□□□□ -2.04
SNU114YKL173W LHS1P36016 881 aa2.31□□□□□ -2.04
SNU114YKL173W YBR139WP38109 508 aa2.31□□□□□ -2.04
SNU114YKL173W BPL1P48445 690 aaPredicted RBP2.31□□□□□ -2.04
SNU114YKL173W LYS20P48570 428 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W NUP84P52891 726 aa2.31□□□□□ -2.04
SNU114YKL173W RPN14P53196 417 aa2.31□□□□□ -2.04
SNU114YKL173W YNL143CP53908 130 aa2.31□□□□□ -2.04
SNU114YKL173W OCA2P53949 197 aa2.31□□□□□ -2.04
SNU114YKL173W ASI1P54074 624 aa2.31□□□□□ -2.04
SNU114YKL173W UTP6Q02354 440 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W BSP1Q06604 576 aa2.31□□□□□ -2.04
SNU114YKL173W AFT2Q08957 416 aa2.31□□□□□ -2.04
SNU114YKL173W AHA1Q12449 350 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W ARG81P05085 880 aa2.31□□□□□ -2.04
SNU114YKL173W RAD52P06778 471 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W COR1P07256 457 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms