RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W DFR1P07807 211 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SEC28YIL076W RPL31BP0C2H9 113 aaKnown RBP3.68□□□□□ -1.82
SEC28YIL076W YCR100CP25606 316 aa3.68□□□□□ -1.82
SEC28YIL076W YMR147WP40218 223 aaKnown RBP3.68□□□□□ -1.82
SEC28YIL076W REE1P40893 198 aa3.68□□□□□ -1.82
SEC28YIL076W TOF1P53840 1238 aa3.68□□□□□ -1.82
SEC28YIL076W VPS75P53853 264 aa3.68□□□□□ -1.82
SEC28YIL076W IBD2P53892 351 aa3.68□□□□□ -1.82
SEC28YIL076W PDS5Q04264 1277 aa3.68□□□□□ -1.82
SEC28YIL076W YPL199CQ08954 240 aa3.68□□□□□ -1.82
SEC28YIL076W SUP35P05453 685 aaKnown RBP3.67□□□□□ -1.82
SEC28YIL076W LEU4P06208 619 aaKnown RBP3.67□□□□□ -1.82
SEC28YIL076W HXT1P32465 570 aa3.67□□□□□ -1.82
SEC28YIL076W MRE11P32829 692 aa3.67□□□□□ -1.82
SEC28YIL076W TIS11P47977 285 aa3.67□□□□□ -1.82
SEC28YIL076W YLR108CQ12259 485 aa3.67□□□□□ -1.82
SEC28YIL076W YAR066WP0CX18 203 aa3.66□□□□□ -1.82
SEC28YIL076W YHR214WP0CX19 203 aa3.66□□□□□ -1.82
SEC28YIL076W CBP4P37267 147 aa3.66□□□□□ -1.82
SEC28YIL076W WWM1P43582 211 aaKnown RBP3.66□□□□□ -1.82
SEC28YIL076W TRS85P46944 698 aa3.66□□□□□ -1.82
SEC28YIL076W ODC1Q03028 310 aa3.66□□□□□ -1.82
SEC28YIL076W FOB1O13329 566 aa3.65□□□□□ -1.83
SEC28YIL076W ADH2P00331 348 aaKnown RBP3.65□□□□□ -1.83
SEC28YIL076W SAM1P10659 382 aaKnown RBP3.65□□□□□ -1.83
SEC28YIL076W SAM2P19358 384 aaKnown RBP3.65□□□□□ -1.83
SEC28YIL076W SPR1P32603 445 aa3.65□□□□□ -1.83
SEC28YIL076W SDH3P33421 198 aa3.65□□□□□ -1.83
SEC28YIL076W MIX23P38162 196 aa3.65□□□□□ -1.83
SEC28YIL076W CST26P38226 397 aa3.65□□□□□ -1.83
SEC28YIL076W OST1P41543 476 aaKnown RBP3.65□□□□□ -1.83
SEC28YIL076W YGL108CP53139 140 aa3.65□□□□□ -1.83
SEC28YIL076W YGL039WP53183 348 aaKnown RBP3.65□□□□□ -1.83
SEC28YIL076W PNG1Q02890 363 aa3.65□□□□□ -1.83
SEC28YIL076W SOV1Q04748 898 aa3.65□□□□□ -1.83
SEC28YIL076W RBD2Q12270 262 aa3.65□□□□□ -1.83
SEC28YIL076W RRD2Q12461 358 aa3.65□□□□□ -1.83
SEC28YIL076W CDC60P26637 1090 aaKnown RBP3.64□□□□□ -1.83
SEC28YIL076W YEL057CP39983 233 aa3.64□□□□□ -1.83
SEC28YIL076W MET28P40573 187 aa3.64□□□□□ -1.83
SEC28YIL076W MRP51Q02950 344 aa3.64□□□□□ -1.83
SEC28YIL076W SVL3Q03088 825 aaKnown RBP3.64□□□□□ -1.83
SEC28YIL076W YDR239CQ03780 787 aa3.64□□□□□ -1.83
SEC28YIL076W SEC39Q12745 709 aa3.64□□□□□ -1.83
SEC28YIL076W GCN4P03069 281 aa3.63□□□□□ -1.83
SEC28YIL076W PIM1P36775 1133 aa3.63□□□□□ -1.83
SEC28YIL076W YCR041WP37265 110 aa3.63□□□□□ -1.83
SEC28YIL076W TMA108P40462 946 aa3.63□□□□□ -1.83
SEC28YIL076W RMD8P43620 662 aa3.63□□□□□ -1.83
SEC28YIL076W NCA3P46955 337 aa3.63□□□□□ -1.83
SEC28YIL076W ARE2P53629 642 aaKnown RBP3.63□□□□□ -1.83
SEC28YIL076W YLR152CP54072 576 aa3.63□□□□□ -1.83
SEC28YIL076W STB6P36085 766 aa3.62□□□□□ -1.83
SEC28YIL076W PRM5P40476 318 aa3.62□□□□□ -1.83
SEC28YIL076W KTR5P53966 522 aaPredicted RBP3.62□□□□□ -1.83
SEC28YIL076W HRI1Q05905 244 aaKnown RBP3.62□□□□□ -1.83
SEC28YIL076W SOD1P00445 154 aaKnown RBP3.61□□□□□ -1.83
SEC28YIL076W MET8P15807 274 aa3.61□□□□□ -1.83
SEC28YIL076W PET123P17558 318 aa3.61□□□□□ -1.83
SEC28YIL076W ATP10P18496 279 aa3.61□□□□□ -1.83
SEC28YIL076W THI2P38141 450 aa3.61□□□□□ -1.83
SEC28YIL076W YBR225WP38321 900 aa3.61□□□□□ -1.83
SEC28YIL076W TAP42Q04372 366 aa3.61□□□□□ -1.83
SEC28YIL076W YML133CQ03099 1374 aa3.61□□□□□ -1.83
SEC28YIL076W YLL067CQ07888 1374 aa3.61□□□□□ -1.83
SEC28YIL076W YLL066CQ99208 1374 aa3.61□□□□□ -1.83
SEC28YIL076W RVS161P25343 265 aaKnown RBP3.6□□□□□ -1.83
SEC28YIL076W OCA4P25366 362 aa3.6□□□□□ -1.83
SEC28YIL076W GFD2P25370 566 aaKnown RBP3.6□□□□□ -1.83
SEC28YIL076W TWF1P53250 332 aa3.6□□□□□ -1.83
SEC28YIL076W MRD1Q06106 887 aaKnown RBP3.6□□□□□ -1.83
SEC28YIL076W MUM3Q08750 479 aa3.6□□□□□ -1.83
SEC28YIL076W SPS22P25380 463 aa3.59□□□□□ -1.83
SEC28YIL076W AFG1P32317 509 aa3.59□□□□□ -1.83
SEC28YIL076W RIB5P38145 238 aa3.59□□□□□ -1.83
SEC28YIL076W MST28P39552 234 aa3.59□□□□□ -1.83
SEC28YIL076W YIP1P53039 248 aa3.59□□□□□ -1.83
SEC28YIL076W PCP1P53259 346 aa3.59□□□□□ -1.83
SEC28YIL076W NCS2P53923 493 aaPredicted RBP3.59□□□□□ -1.83
SEC28YIL076W RAD61Q99359 647 aa3.59□□□□□ -1.83
SEC28YIL076W DAL2P25335 343 aa3.58□□□□□ -1.84
SEC28YIL076W SPB1P25582 841 aaPredicted RBP3.58□□□□□ -1.84
SEC28YIL076W PAN6P40459 309 aa3.58□□□□□ -1.84
SEC28YIL076W LAM5P43560 674 aa3.58□□□□□ -1.84
SEC28YIL076W SSN8P47821 323 aa3.58□□□□□ -1.84
SEC28YIL076W YGR149WP48236 432 aa3.58□□□□□ -1.84
SEC28YIL076W RPT6Q01939 405 aaKnown RBP3.58□□□□□ -1.84
SEC28YIL076W ATG29Q12092 213 aa3.58□□□□□ -1.84
SEC28YIL076W RHO2P06781 192 aa3.57□□□□□ -1.84
SEC28YIL076W NAT1P12945 854 aaKnown RBP3.57□□□□□ -1.84
SEC28YIL076W TIP1P27654 210 aaPredicted RBP3.57□□□□□ -1.84
SEC28YIL076W SPO22P40511 975 aa3.57□□□□□ -1.84
SEC28YIL076W TIM10P87108 93 aa3.57□□□□□ -1.84
SEC28YIL076W YLR278CQ05854 1341 aa3.56□□□□□ -1.84
SEC28YIL076W IDH2P28241 369 aaKnown RBP3.56□□□□□ -1.84
SEC28YIL076W RAD14P28519 371 aa3.56□□□□□ -1.84
SEC28YIL076W GYP6P32806 458 aa3.56□□□□□ -1.84
SEC28YIL076W REC114P32841 428 aa3.56□□□□□ -1.84
SEC28YIL076W PRS1P32895 427 aaKnown RBP3.56□□□□□ -1.84
SEC28YIL076W SEC66P33754 206 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms