RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX21	YGR239C	NFI1	Q12216	726 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	MTR10	Q99189	972 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	RIP1	P08067	215 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	YML002W	P0CF17	737 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	MDM10	P18409	493 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	ACH1	P32316	526 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	RPN2	P32565	945 aa	Known RBP	4.07	□□□□□ -1.76
PEX21	YGR239C	UTR4	P32626	227 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	FRE1	P32791	686 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	VPS17	P32913	551 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	YMR147W	P40218	223 aa	Known RBP	4.07	□□□□□ -1.76
PEX21	YGR239C	YIF1	P53845	314 aa	Known RBP	4.07	□□□□□ -1.76
PEX21	YGR239C	RHO5	P53879	331 aa	Known RBP	4.07	□□□□□ -1.76
PEX21	YGR239C	NCS2	P53923	493 aa	Predicted RBP	4.07	□□□□□ -1.76
PEX21	YGR239C	EOS1	P53938	366 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	YPL107W	Q02873	248 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	SLD5	Q03406	294 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	YDR387C	Q04162	555 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	DSE3	Q08729	430 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	KEL3	Q08979	651 aa	Predicted RBP	4.07	□□□□□ -1.76
PEX21	YGR239C	RKM5	Q12367	367 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	CSR2	Q12734	1121 aa		4.07	□□□□□ -1.76
PEX21	YGR239C	GLK1	P17709	500 aa	Known RBP	4.06	□□□□□ -1.76
PEX21	YGR239C	AIM17	P23180	465 aa	Known RBP	4.06	□□□□□ -1.76
PEX21	YGR239C	KRE2	P27809	442 aa		4.06	□□□□□ -1.76
PEX21	YGR239C	PUP2	P32379	260 aa		4.06	□□□□□ -1.76
PEX21	YGR239C	APE2	P32454	952 aa	Known RBP	4.06	□□□□□ -1.76
PEX21	YGR239C	ANP1	P32629	500 aa		4.06	□□□□□ -1.76
PEX21	YGR239C	HEL1	P36113	551 aa		4.06	□□□□□ -1.76
PEX21	YGR239C	OSH3	P38713	996 aa	Known RBP	4.06	□□□□□ -1.76
PEX21	YGR239C	WSS1	P38838	269 aa		4.06	□□□□□ -1.76
PEX21	YGR239C	TFG2	P41896	400 aa	Predicted RBP	4.06	□□□□□ -1.76
PEX21	YGR239C	SAM50	P53969	484 aa		4.06	□□□□□ -1.76
PEX21	YGR239C	DIG1	Q03063	452 aa	Known RBP	4.06	□□□□□ -1.76
PEX21	YGR239C	HSP31	Q04432	237 aa		4.06	□□□□□ -1.76
PEX21	YGR239C	YLR456W	Q06199	204 aa		4.06	□□□□□ -1.76
PEX21	YGR239C	CUE5	Q08412	411 aa	Known RBP	4.06	□□□□□ -1.76
PEX21	YGR239C	SUC2	P00724	532 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	CAR1	P00812	333 aa	Known RBP	4.05	□□□□□ -1.76
PEX21	YGR239C	MSP1	P28737	362 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	SIN4	P32259	974 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	ERG1	P32476	496 aa	Known RBP	4.05	□□□□□ -1.76
PEX21	YGR239C	PRP21	P32524	280 aa	Predicted RBP	4.05	□□□□□ -1.76
PEX21	YGR239C	TRS65	P32893	560 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	ECM15	P35195	104 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	SWH1	P35845	1188 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	ZTA1	P38230	334 aa	Known RBP	4.05	□□□□□ -1.76
PEX21	YGR239C	VPS52	P39904	641 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	PCL6	P40038	420 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	BNA3	P47039	444 aa	Known RBP	4.05	□□□□□ -1.76
PEX21	YGR239C	PCP1	P53259	346 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	SCW4	P53334	386 aa	Known RBP	4.05	□□□□□ -1.76
PEX21	YGR239C	RBA50	Q04418	439 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	YMR034C	Q05131	434 aa	Predicted RBP	4.05	□□□□□ -1.76
PEX21	YGR239C	UAF30	Q08747	228 aa		4.05	□□□□□ -1.76
PEX21	YGR239C	LSP1	Q12230	341 aa	Known RBP	4.05	□□□□□ -1.76
PEX21	YGR239C	RPL1A	P0CX43	217 aa	Known RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	RPL1B	P0CX44	217 aa	Known RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	EXO70	P19658	623 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	HNM1	P19807	563 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	YCP4	P25349	247 aa	Known RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	YCR007C	P25354	239 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	RIM1	P32445	135 aa	Known RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	GYP6	P32806	458 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	SOR1	P35497	357 aa	Known RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	RSM22	P36056	628 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	LAS1	P36146	502 aa	Predicted RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	RRP4	P38792	359 aa	Known RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	CCT2	P39076	527 aa	Known RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	YER130C	P39959	443 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	ISC1	P40015	477 aa	Known RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	VHS2	P40463	436 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	ECM27	P47144	725 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	RPT4	P53549	437 aa	Known RBP	4.04	□□□□□ -1.76
PEX21	YGR239C	PPM1	Q04081	328 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	YMR087W	Q04299	284 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	SOR2	Q07786	357 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	THI20	Q08224	551 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	UBX3	Q12229	455 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	RRD2	Q12461	358 aa		4.04	□□□□□ -1.76
PEX21	YGR239C	RPL6B	P05739	176 aa	Known RBP	4.03	□□□□□ -1.76
PEX21	YGR239C	PMR1	P13586	950 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	SMI1	P32566	505 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	RAD24	P32641	659 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	SPC34	P36131	295 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	RRN10	P38204	145 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	EFM2	P38347	419 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	POP2	P39008	433 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	FAU1	P40099	211 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	CSM2	P40465	213 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	PCI8	P40512	444 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	ELP2	P42935	788 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	PIB2	P53191	635 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	RPL6A	Q02326	176 aa	Known RBP	4.03	□□□□□ -1.76
PEX21	YGR239C	RLI1	Q03195	608 aa	Known RBP	4.03	□□□□□ -1.76
PEX21	YGR239C	YMR254C	Q04838	102 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	MDM30	Q05930	598 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	MRPL51	Q06090	140 aa	Predicted RBP	4.03	□□□□□ -1.76
PEX21	YGR239C	MLH2	Q07980	695 aa		4.03	□□□□□ -1.76
PEX21	YGR239C	YDR061W	Q12298	539 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms