RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W ECM10P39987 644 aa3.26□□□□□ -1.89
SIZ1YDR409W RPN3P40016 523 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W CCT7P42943 550 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W URC2Q04411 772 aa3.26□□□□□ -1.89
SIZ1YDR409W YDL073WQ07454 984 aa3.26□□□□□ -1.89
SIZ1YDR409W AAD15Q08361 143 aa3.26□□□□□ -1.89
SIZ1YDR409W HRK1Q08732 759 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W GPA2P10823 449 aa3.25□□□□□ -1.89
SIZ1YDR409W RAP1P11938 827 aa3.25□□□□□ -1.89
SIZ1YDR409W MRP13P12686 339 aa3.25□□□□□ -1.89
SIZ1YDR409W ABF1P14164 731 aa3.25□□□□□ -1.89
SIZ1YDR409W APA2P22108 325 aa3.25□□□□□ -1.89
SIZ1YDR409W VPS3P23643 1011 aa3.25□□□□□ -1.89
SIZ1YDR409W IMG2P25642 146 aaPredicted RBP3.25□□□□□ -1.89
SIZ1YDR409W ARP2P32381 391 aaKnown RBP3.25□□□□□ -1.89
SIZ1YDR409W CYM1P32898 989 aa3.25□□□□□ -1.89
SIZ1YDR409W YHB1P39676 399 aaKnown RBP3.25□□□□□ -1.89
SIZ1YDR409W MSS2P40990 351 aa3.25□□□□□ -1.89
SIZ1YDR409W ECL1P48235 211 aa3.25□□□□□ -1.89
SIZ1YDR409W RMR1P53060 241 aa3.25□□□□□ -1.89
SIZ1YDR409W PEF1P53238 335 aa3.25□□□□□ -1.89
SIZ1YDR409W DAM1P53267 343 aa3.25□□□□□ -1.89
SIZ1YDR409W BSC5P53755 489 aa3.25□□□□□ -1.89
SIZ1YDR409W YMR209CQ03648 457 aa3.25□□□□□ -1.89
SIZ1YDR409W PPN1Q04119 674 aa3.25□□□□□ -1.89
SIZ1YDR409W DYN3Q04949 312 aa3.25□□□□□ -1.89
SIZ1YDR409W SSQ1Q05931 657 aaPredicted RBP3.25□□□□□ -1.89
SIZ1YDR409W AAD4Q07747 329 aa3.25□□□□□ -1.89
SIZ1YDR409W GIS3Q12418 502 aa3.25□□□□□ -1.89
SIZ1YDR409W CDC19P00549 500 aaKnown RBP3.25□□□□□ -1.89
SIZ1YDR409W PMA2P19657 947 aa3.25□□□□□ -1.89
SIZ1YDR409W SLY1P22213 666 aa3.25□□□□□ -1.89
SIZ1YDR409W CPR2P23285 205 aa3.25□□□□□ -1.89
SIZ1YDR409W SEC1P30619 724 aaKnown RBP3.25□□□□□ -1.89
SIZ1YDR409W UGP1P32861 499 aaKnown RBP3.25□□□□□ -1.89
SIZ1YDR409W RPC34P32910 317 aa3.25□□□□□ -1.89
SIZ1YDR409W SRB2P34162 210 aa3.25□□□□□ -1.89
SIZ1YDR409W VPS21P36017 210 aaKnown RBP3.25□□□□□ -1.89
SIZ1YDR409W MRPL40P36534 297 aa3.25□□□□□ -1.89
SIZ1YDR409W STV1P37296 890 aa3.25□□□□□ -1.89
SIZ1YDR409W YBR242WP38331 238 aa3.25□□□□□ -1.89
SIZ1YDR409W SER33P40510 469 aa3.25□□□□□ -1.89
SIZ1YDR409W BUD8P41698 603 aa3.25□□□□□ -1.89
SIZ1YDR409W ZIM17P42844 174 aa3.25□□□□□ -1.89
SIZ1YDR409W ECM7Q06200 448 aa3.25□□□□□ -1.89
SIZ1YDR409W SYO1Q07395 620 aa3.25□□□□□ -1.89
SIZ1YDR409W APC9Q12107 265 aa3.25□□□□□ -1.89
SIZ1YDR409W UBX3Q12229 455 aa3.25□□□□□ -1.89
SIZ1YDR409W MDY2Q12285 212 aa3.25□□□□□ -1.89
SIZ1YDR409W RPN13O13563 156 aa3.24□□□□□ -1.89
SIZ1YDR409W GCY1P14065 312 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SIZ1YDR409W YCR015CP25616 317 aa3.24□□□□□ -1.89
SIZ1YDR409W YCR016WP25617 290 aaKnown RBP3.24□□□□□ -1.89
SIZ1YDR409W CSM1P25651 190 aa3.24□□□□□ -1.89
SIZ1YDR409W AFG1P32317 509 aa3.24□□□□□ -1.89
SIZ1YDR409W SMI1P32566 505 aa3.24□□□□□ -1.89
SIZ1YDR409W SKG6P32900 734 aaPredicted RBP3.24□□□□□ -1.89
SIZ1YDR409W KDX1P36005 433 aa3.24□□□□□ -1.89
SIZ1YDR409W YBR241CP38142 488 aa3.24□□□□□ -1.89
SIZ1YDR409W SEC31P38968 1273 aaKnown RBP3.24□□□□□ -1.89
SIZ1YDR409W KRE29P40026 464 aa3.24□□□□□ -1.89
SIZ1YDR409W SLZ1P40167 298 aa3.24□□□□□ -1.89
SIZ1YDR409W YJR061WP40355 935 aa3.24□□□□□ -1.89
SIZ1YDR409W ELP2P42935 788 aa3.24□□□□□ -1.89
SIZ1YDR409W YMR099CQ03161 297 aaKnown RBP3.24□□□□□ -1.89
SIZ1YDR409W FIN1Q03898 291 aa3.24□□□□□ -1.89
SIZ1YDR409W RRP17Q04031 235 aaPredicted RBP3.24□□□□□ -1.89
SIZ1YDR409W ATG38Q05789 226 aaKnown RBP3.24□□□□□ -1.89
SIZ1YDR409W YPR196WQ06595 470 aa3.24□□□□□ -1.89
SIZ1YDR409W LOT6Q07923 191 aa3.24□□□□□ -1.89
SIZ1YDR409W SWT1Q12104 458 aa3.24□□□□□ -1.89
SIZ1YDR409W RTC5Q12108 567 aaKnown RBP3.24□□□□□ -1.89
SIZ1YDR409W RGS2Q99188 309 aa3.24□□□□□ -1.89
SIZ1YDR409W ECM3Q99252 613 aa3.24□□□□□ -1.89
SIZ1YDR409W Q0010Q9ZZX9 128 aa3.24□□□□□ -1.89
SIZ1YDR409W UBR2Q07963 1872 aa3.24□□□□□ -1.89
SIZ1YDR409W TPK3P05986 398 aa3.24□□□□□ -1.89
SIZ1YDR409W NFT1P0CE68 1218 aa3.24□□□□□ -1.89
SIZ1YDR409W CBS1P14066 229 aa3.24□□□□□ -1.89
SIZ1YDR409W UGA1P17649 471 aa3.24□□□□□ -1.89
SIZ1YDR409W BUD5P25300 642 aaPredicted RBP3.24□□□□□ -1.89
SIZ1YDR409W PHO91P27514 894 aa3.24□□□□□ -1.89
SIZ1YDR409W PHA2P32452 334 aa3.24□□□□□ -1.89
SIZ1YDR409W MRP4P32902 394 aa3.24□□□□□ -1.89
SIZ1YDR409W SKG1P36169 355 aa3.24□□□□□ -1.89
SIZ1YDR409W ATG12P38316 186 aa3.24□□□□□ -1.89
SIZ1YDR409W SWC5P38326 303 aa3.24□□□□□ -1.89
SIZ1YDR409W ARN1P38731 627 aa3.24□□□□□ -1.89
SIZ1YDR409W SNZ3P43545 298 aa3.24□□□□□ -1.89
SIZ1YDR409W ZAP1P47043 880 aa3.24□□□□□ -1.89
SIZ1YDR409W IMD3P50095 523 aaKnown RBP3.24□□□□□ -1.89
SIZ1YDR409W SNZ2P53824 298 aa3.24□□□□□ -1.89
SIZ1YDR409W CUS2P53830 285 aaPredicted RBP3.24□□□□□ -1.89
SIZ1YDR409W DML1Q03652 475 aa3.24□□□□□ -1.89
SIZ1YDR409W SMA2Q04658 369 aa3.24□□□□□ -1.89
SIZ1YDR409W GAD1Q04792 585 aa3.24□□□□□ -1.89
SIZ1YDR409W STP3Q05937 343 aa3.24□□□□□ -1.89
SIZ1YDR409W AIM6Q07716 390 aa3.24□□□□□ -1.89
SIZ1YDR409W ULA1Q12059 462 aa3.24□□□□□ -1.89
SIZ1YDR409W MED2Q12124 431 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms