RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	RSA1	Q08932	381 aa		4.27	□□□□□ -1.73
TRP4	YDR354W	NMD4	Q12129	218 aa		4.27	□□□□□ -1.73
TRP4	YDR354W	YRF1-2	P40105	1681 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	SUC2	P00724	532 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	INH1	P01097	85 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	CBS2	P14905	389 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	DAL5	P15365	543 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	AAC3	P18238	307 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	ELO2	P25358	347 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	SWI3	P32591	825 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	SAC6	P32599	642 aa	Known RBP	4.26	□□□□□ -1.73
TRP4	YDR354W	SEF1	P34228	1148 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	PMU1	P36069	295 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	PCA1	P38360	1216 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	FLC2	P39719	783 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	ALG5	P40350	334 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
TRP4	YDR354W	IMD4	P50094	524 aa	Known RBP	4.26	□□□□□ -1.73
TRP4	YDR354W	MDM1	Q01846	1127 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	SVL3	Q03088	825 aa	Known RBP	4.26	□□□□□ -1.73
TRP4	YDR354W	PHO92	Q06390	306 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	THP1	Q08231	455 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	YLL056C	Q12177	298 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	ENT1	Q12518	454 aa		4.26	□□□□□ -1.73
TRP4	YDR354W	SAN1	P22470	610 aa		4.25	□□□□□ -1.73
TRP4	YDR354W	YCR007C	P25354	239 aa		4.25	□□□□□ -1.73
TRP4	YDR354W	SDS24	P38314	527 aa		4.25	□□□□□ -1.73
TRP4	YDR354W	SHO1	P40073	367 aa		4.25	□□□□□ -1.73
TRP4	YDR354W	VID30	P53076	958 aa		4.25	□□□□□ -1.73
TRP4	YDR354W	UTP10	P42945	1769 aa	Known RBP	4.25	□□□□□ -1.73
TRP4	YDR354W	RPP0	P05317	312 aa	Known RBP	4.24	□□□□□ -1.73
TRP4	YDR354W	SEC53	P07283	254 aa	Known RBP	4.24	□□□□□ -1.73
TRP4	YDR354W	SHP1	P34223	423 aa		4.24	□□□□□ -1.73
TRP4	YDR354W	YAP3	P38749	330 aa		4.24	□□□□□ -1.73
TRP4	YDR354W	TIF4631	P39935	952 aa	Known RBP	4.24	□□□□□ -1.73
TRP4	YDR354W	AIM22	P47051	409 aa		4.24	□□□□□ -1.73
TRP4	YDR354W	WSC2	P53832	503 aa		4.24	□□□□□ -1.73
TRP4	YDR354W	TOF2	Q02208	771 aa		4.24	□□□□□ -1.73
TRP4	YDR354W	RLM1	Q12224	676 aa		4.24	□□□□□ -1.73
TRP4	YDR354W	SNU66	Q12420	587 aa	Predicted RBP	4.24	□□□□□ -1.73
TRP4	YDR354W	SEM1	O94742	89 aa		4.23	□□□□□ -1.73
TRP4	YDR354W	UTR4	P32626	227 aa		4.23	□□□□□ -1.73
TRP4	YDR354W	MSN2	P33748	704 aa		4.23	□□□□□ -1.73
TRP4	YDR354W	TUL1	P36096	758 aa		4.23	□□□□□ -1.73
TRP4	YDR354W	TCD2	P36101	447 aa	Known RBP	4.23	□□□□□ -1.73
TRP4	YDR354W	DUG2	P38149	878 aa		4.23	□□□□□ -1.73
TRP4	YDR354W	BNA4	P38169	460 aa		4.23	□□□□□ -1.73
TRP4	YDR354W	TCM62	P38228	572 aa	Known RBP	4.23	□□□□□ -1.73
TRP4	YDR354W	MUM2	P38236	366 aa		4.23	□□□□□ -1.73
TRP4	YDR354W	TIF5	P38431	405 aa	Known RBP	4.23	□□□□□ -1.73
TRP4	YDR354W	MSR1	P38714	643 aa		4.23	□□□□□ -1.73
TRP4	YDR354W	NOP16	P40007	231 aa	Known RBP	4.23	□□□□□ -1.73
TRP4	YDR354W	ALK1	P43633	760 aa	Known RBP	4.23	□□□□□ -1.73
TRP4	YDR354W	UPF3	P48412	387 aa	Known RBP	4.23	□□□□□ -1.73
TRP4	YDR354W	IRC15	Q02733	499 aa		4.23	□□□□□ -1.73
TRP4	YDR354W	LSP1	Q12230	341 aa	Known RBP	4.23	□□□□□ -1.73
TRP4	YDR354W	RAD9	P14737	1309 aa		4.22	□□□□□ -1.73
TRP4	YDR354W	FOB1	O13329	566 aa		4.22	□□□□□ -1.73
TRP4	YDR354W	HAT2	P39984	401 aa		4.22	□□□□□ -1.73
TRP4	YDR354W	ALG8	P40351	577 aa		4.22	□□□□□ -1.73
TRP4	YDR354W	IDP2	P41939	412 aa		4.22	□□□□□ -1.73
TRP4	YDR354W	YJL132W	P47014	750 aa		4.22	□□□□□ -1.73
TRP4	YDR354W	MRX6	P48564	524 aa		4.22	□□□□□ -1.73
TRP4	YDR354W	TLG1	Q03322	224 aa		4.22	□□□□□ -1.73
TRP4	YDR354W	RTP1	Q12751	981 aa		4.22	□□□□□ -1.73
TRP4	YDR354W	FAS2	P19097	1887 aa	Known RBP	4.22	□□□□□ -1.73
TRP4	YDR354W	ATR1	P13090	542 aa		4.21	□□□□□ -1.74
TRP4	YDR354W	NOP1	P15646	327 aa	Known RBP	4.21	□□□□□ -1.74
TRP4	YDR354W	GFD2	P25370	566 aa	Known RBP	4.21	□□□□□ -1.74
TRP4	YDR354W	RBG2	P53295	368 aa	Known RBP	4.21	□□□□□ -1.74
TRP4	YDR354W	ZPR1	P53303	486 aa	Known RBP	4.21	□□□□□ -1.74
TRP4	YDR354W	SXM1	Q04175	944 aa	Known RBP	4.21	□□□□□ -1.74
TRP4	YDR354W	YDL144C	Q07589	356 aa		4.21	□□□□□ -1.74
TRP4	YDR354W	RCN2	Q12044	265 aa		4.21	□□□□□ -1.74
TRP4	YDR354W	YJR112W-A	Q3E743	109 aa		4.21	□□□□□ -1.74
TRP4	YDR354W	GAL80	P04387	435 aa		4.2	□□□□□ -1.74
TRP4	YDR354W	PEP3	P27801	918 aa		4.2	□□□□□ -1.74
TRP4	YDR354W	REG2	P38232	338 aa		4.2	□□□□□ -1.74
TRP4	YDR354W	RRP46	P53256	223 aa	Predicted RBP	4.2	□□□□□ -1.74
TRP4	YDR354W	GPI1	P53306	609 aa		4.2	□□□□□ -1.74
TRP4	YDR354W	HEF3	P53978	1044 aa	Known RBP	4.2	□□□□□ -1.74
TRP4	YDR354W	SPC19	Q03954	165 aa		4.2	□□□□□ -1.74
TRP4	YDR354W	VPS74	Q06385	345 aa		4.2	□□□□□ -1.74
TRP4	YDR354W	IMH1	Q06704	911 aa	Known RBP	4.2	□□□□□ -1.74
TRP4	YDR354W	CTI6	Q08923	506 aa		4.2	□□□□□ -1.74
TRP4	YDR354W	CFT2	Q12102	859 aa	Predicted RBP	4.2	□□□□□ -1.74
TRP4	YDR354W	CTF3	Q12748	733 aa		4.2	□□□□□ -1.74
TRP4	YDR354W	YCL021W-A	Q96VH3	125 aa		4.2	□□□□□ -1.74
TRP4	YDR354W	AUS1	Q08409	1394 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	MES1	P00958	751 aa	Known RBP	4.19	□□□□□ -1.74
TRP4	YDR354W	CBS1	P14066	229 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	HSC82	P15108	705 aa	Known RBP	4.19	□□□□□ -1.74
TRP4	YDR354W	CLC1	P17891	233 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	PUT3	P25502	979 aa	Predicted RBP	4.19	□□□□□ -1.74
TRP4	YDR354W	SAS3	P34218	831 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	YBP1	P38315	674 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	SPG5	P42933	373 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	YPI1	P43587	155 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	GWT1	P47026	490 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	SRB7	P47822	140 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms