RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	TIF3	P34167	436 aa	Known RBP	4.58	□□□□□ -1.68
SUP35	YDR172W	PCL5	P38794	229 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	DUN1	P39009	513 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	HEM14	P40012	539 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	IME4	P41833	600 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	MEP2	P41948	499 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	NAS6	P50086	228 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	MNT2	P53059	558 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	RMR1	P53060	241 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	SPC105	P53148	917 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	ELA1	P53861	379 aa	Predicted RBP	4.58	□□□□□ -1.68
SUP35	YDR172W	ORC3	P54790	616 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	RAD33	Q04231	177 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	RSC3	Q06639	885 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	YDL121C	Q07541	149 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	NSE1	Q07913	336 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	RSB1	Q08417	382 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	UAF30	Q08747	228 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	GET4	Q12125	312 aa		4.58	□□□□□ -1.68
SUP35	YDR172W	SEM1	O94742	89 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	RHO1	P06780	209 aa	Known RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	MSF1	P08425	469 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	REV1	P12689	985 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	VPH2	P32341	215 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	COQ2	P32378	372 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	COX13	P32799	129 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	MED6	P38782	295 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	YHR218W	P38899	603 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	ELP2	P42935	788 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	UPF3	P48412	387 aa	Known RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	PRM1	P53835	661 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	YMR010W	Q03687	405 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	YDR179W-A	Q03983	463 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	HDA2	Q06629	674 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	GIC2	Q06648	383 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	LOT6	Q07923	191 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	AVO1	Q08236	1176 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	MHT1	Q12525	324 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	THP2	O13539	261 aa	Known RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	TOP3	P13099	656 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	ERG6	P25087	383 aa	Known RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	POL4	P25615	582 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	TIP20	P33891	701 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	PXA2	P34230	853 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	APE4	P38821	490 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	DSS1	P39112	969 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	YAR028W	P39548	234 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	MTW1	P39731	289 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	RGI1	P40043	161 aa	Predicted RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	ARF3	P40994	183 aa	RIP-Chip data	4.57	□□□□□ -1.68	not detected
SUP35	YDR172W	ERG10	P41338	398 aa	Known RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	OYE3	P41816	400 aa	Predicted RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	AGP3	P43548	558 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	GLG2	P47011	380 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	GTO1	P48239	356 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	PYK2	P52489	506 aa	Known RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	SDH1	Q00711	640 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	SPR6	Q01684	191 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	MET31	Q03081	177 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	YMR099C	Q03161	297 aa	Known RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	VTA1	Q06263	330 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	DTD1	Q07648	150 aa	Known RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	PSR1	Q07800	427 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	TGL5	Q12043	749 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	SMF3	Q12078	473 aa	Predicted RBP	4.57	□□□□□ -1.68
SUP35	YDR172W	CCH1	P50077	2039 aa		4.57	□□□□□ -1.68
SUP35	YDR172W	FAB1	P34756	2278 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	YAR066W	P0CX18	203 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	YHR214W	P0CX19	203 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	SEC63	P14906	663 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	CNA1	P23287	553 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	RPL5	P26321	297 aa	Known RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	UBC8	P28263	218 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	BRF1	P29056	596 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	NTG1	P31378	399 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	SAC1	P32368	623 aa	Known RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	SPS19	P32573	292 aa	Known RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	ATO2	P32907	282 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	ECM4	P36156	370 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	FTH1	P38310	465 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	YBR285W	P38354	144 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	YHR020W	P38708	688 aa	Known RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	ERV46	P39727	415 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	DOT6	P40059	670 aa	Known RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	UTP18	P40362	594 aa	Predicted RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	YRB2	P40517	327 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	GYP8	P43570	497 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SUP35	YDR172W	MTR3	P48240	250 aa	Predicted RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	ARE2	P53629	642 aa	Known RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	AAT1	Q01802	451 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	EFR3	Q03653	782 aa	Known RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	PPN1	Q04119	674 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	SMP3	Q04174	516 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	YMR226C	Q05016	267 aa	Known RBP	4.56	□□□□□ -1.68
SUP35	YDR172W	ATG17	Q06410	417 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	GPI11	Q06636	219 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	YOL131W	Q08270	108 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	SGO1	Q08490	590 aa		4.56	□□□□□ -1.68
SUP35	YDR172W	SNF8	Q12483	233 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms