RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W SYG1P40528 902 aa3.57□□□□□ -1.84
UBC9YDL064W VTC2P43585 828 aa3.57□□□□□ -1.84
UBC9YDL064W IKS1P47042 667 aa3.57□□□□□ -1.84
UBC9YDL064W YGL108CP53139 140 aa3.57□□□□□ -1.84
UBC9YDL064W CUL3P53202 744 aa3.57□□□□□ -1.84
UBC9YDL064W IVY1Q04934 453 aa3.57□□□□□ -1.84
UBC9YDL064W BNA5Q05979 453 aa3.57□□□□□ -1.84
UBC9YDL064W YEH2Q07950 538 aa3.57□□□□□ -1.84
UBC9YDL064W DAP1Q12091 152 aa3.57□□□□□ -1.84
UBC9YDL064W CFT2Q12102 859 aaPredicted RBP3.57□□□□□ -1.84
UBC9YDL064W RAV1P47104 1357 aa3.56□□□□□ -1.84
UBC9YDL064W SPB1P25582 841 aaPredicted RBP3.56□□□□□ -1.84
UBC9YDL064W FUN19P28003 413 aaPredicted RBP3.56□□□□□ -1.84
UBC9YDL064W THI2P38141 450 aa3.56□□□□□ -1.84
UBC9YDL064W MEP2P41948 499 aa3.56□□□□□ -1.84
UBC9YDL064W SIL1Q08199 421 aa3.56□□□□□ -1.84
UBC9YDL064W GLK1P17709 500 aaKnown RBP3.55□□□□□ -1.84
UBC9YDL064W YCR007CP25354 239 aa3.55□□□□□ -1.84
UBC9YDL064W YIM1P28625 365 aa3.55□□□□□ -1.84
UBC9YDL064W RRP3P38712 501 aaKnown RBP3.55□□□□□ -1.84
UBC9YDL064W POP1P41812 875 aa3.55□□□□□ -1.84
UBC9YDL064W DIM1P41819 318 aaKnown RBP3.55□□□□□ -1.84
UBC9YDL064W YGR149WP48236 432 aa3.55□□□□□ -1.84
UBC9YDL064W YGL082WP53155 381 aa3.55□□□□□ -1.84
UBC9YDL064W GPI1P53306 609 aa3.55□□□□□ -1.84
UBC9YDL064W ARX1Q03862 593 aaKnown RBP3.55□□□□□ -1.84
UBC9YDL064W GRS2Q06817 618 aa3.55□□□□□ -1.84
UBC9YDL064W KEL3Q08979 651 aaPredicted RBP3.55□□□□□ -1.84
UBC9YDL064W ATP10P18496 279 aa3.54□□□□□ -1.84
UBC9YDL064W IDH2P28241 369 aaKnown RBP3.54□□□□□ -1.84
UBC9YDL064W RAD14P28519 371 aa3.54□□□□□ -1.84
UBC9YDL064W AFG1P32317 509 aa3.54□□□□□ -1.84
UBC9YDL064W TUL1P36096 758 aa3.54□□□□□ -1.84
UBC9YDL064W YTA12P40341 825 aa3.54□□□□□ -1.84
UBC9YDL064W OCA1P50946 238 aaPredicted RBP3.54□□□□□ -1.84
UBC9YDL064W RPM2Q02773 1202 aa3.54□□□□□ -1.84
UBC9YDL064W MRPL51Q06090 140 aaPredicted RBP3.54□□□□□ -1.84
UBC9YDL064W YDL009CQ12210 107 aa3.54□□□□□ -1.84
UBC9YDL064W ISN1Q99312 450 aa3.54□□□□□ -1.84
UBC9YDL064W RPL15AP05748 204 aaKnown RBP3.53□□□□□ -1.84
UBC9YDL064W NDC1P32500 655 aa3.53□□□□□ -1.84
UBC9YDL064W NFU1P32860 256 aa3.53□□□□□ -1.84
UBC9YDL064W YJL070CP40361 888 aa3.53□□□□□ -1.84
UBC9YDL064W DLD2P46681 530 aaKnown RBP3.53□□□□□ -1.84
UBC9YDL064W YDR131CQ03899 556 aa3.53□□□□□ -1.84
UBC9YDL064W SPC19Q03954 165 aa3.53□□□□□ -1.84
UBC9YDL064W YMR317WQ04893 1140 aa3.53□□□□□ -1.84
UBC9YDL064W HCR1Q05775 265 aaKnown RBP3.53□□□□□ -1.84
UBC9YDL064W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
UBC9YDL064W TIP41Q12199 356 aa3.53□□□□□ -1.84
UBC9YDL064W SFI1Q12369 946 aa3.53□□□□□ -1.84
UBC9YDL064W CLB3P24870 427 aa3.52□□□□□ -1.85
UBC9YDL064W RPC53P25441 422 aa3.52□□□□□ -1.85
UBC9YDL064W BUB3P26449 341 aa3.52□□□□□ -1.85
UBC9YDL064W RML2P32611 393 aa3.52□□□□□ -1.85
UBC9YDL064W PTR2P32901 601 aa3.52□□□□□ -1.85
UBC9YDL064W YNK1P36010 153 aaKnown RBP3.52□□□□□ -1.85
UBC9YDL064W MTC4P38335 694 aaKnown RBP3.52□□□□□ -1.85
UBC9YDL064W OTU2P38747 307 aaKnown RBP3.52□□□□□ -1.85
UBC9YDL064W YAT2P40017 923 aa3.52□□□□□ -1.85
UBC9YDL064W RPR2P40571 144 aa3.52□□□□□ -1.85
UBC9YDL064W YFR016CP43597 1233 aaKnown RBP3.52□□□□□ -1.85
UBC9YDL064W MNP1P53163 194 aaPredicted RBP3.52□□□□□ -1.85
UBC9YDL064W BNI5P53890 448 aaKnown RBP3.52□□□□□ -1.85
UBC9YDL064W IRC15Q02733 499 aa3.52□□□□□ -1.85
UBC9YDL064W LSP1Q12230 341 aaKnown RBP3.52□□□□□ -1.85
UBC9YDL064W YRF1-4O13559 1382 aa3.51□□□□□ -1.85
UBC9YDL064W CAR1P00812 333 aaKnown RBP3.51□□□□□ -1.85
UBC9YDL064W YML002WP0CF17 737 aa3.51□□□□□ -1.85
UBC9YDL064W ADK2P26364 225 aa3.51□□□□□ -1.85
UBC9YDL064W LOS1P33418 1100 aaPredicted RBP3.51□□□□□ -1.85
UBC9YDL064W STB6P36085 766 aa3.51□□□□□ -1.85
UBC9YDL064W DHH1P39517 506 aaKnown RBP3.51□□□□□ -1.85
UBC9YDL064W HAT2P39984 401 aa3.51□□□□□ -1.85
UBC9YDL064W RTT101P47050 842 aa3.51□□□□□ -1.85
UBC9YDL064W SCS3P53012 380 aa3.51□□□□□ -1.85
UBC9YDL064W YGL260WP53056 76 aa3.51□□□□□ -1.85
UBC9YDL064W VTA1Q06263 330 aa3.51□□□□□ -1.85
UBC9YDL064W AYT1Q12226 474 aa3.51□□□□□ -1.85
UBC9YDL064W YMR230W-AQ3E7B5 62 aa3.51□□□□□ -1.85
UBC9YDL064W RHO2P06781 192 aa3.5□□□□□ -1.85
UBC9YDL064W PDX1P16451 410 aa3.5□□□□□ -1.85
UBC9YDL064W SNT1P25357 1226 aa3.5□□□□□ -1.85
UBC9YDL064W YCR051WP25631 222 aa3.5□□□□□ -1.85
UBC9YDL064W ERV1P27882 189 aa3.5□□□□□ -1.85
UBC9YDL064W SPC110P32380 944 aa3.5□□□□□ -1.85
UBC9YDL064W FAU1P40099 211 aa3.5□□□□□ -1.85
UBC9YDL064W ARK1P53974 638 aa3.5□□□□□ -1.85
UBC9YDL064W BRR1Q99177 341 aaPredicted RBP3.5□□□□□ -1.85
UBC9YDL064W HEM2P05373 342 aa3.49□□□□□ -1.85
UBC9YDL064W SPS4P09937 338 aa3.49□□□□□ -1.85
UBC9YDL064W NIP100P33420 868 aa3.49□□□□□ -1.85
UBC9YDL064W HCS1P34243 683 aa3.49□□□□□ -1.85
UBC9YDL064W FRE2P36033 711 aa3.49□□□□□ -1.85
UBC9YDL064W FMP46P36141 133 aaKnown RBP3.49□□□□□ -1.85
UBC9YDL064W RTT107P38850 1070 aa3.49□□□□□ -1.85
UBC9YDL064W RPH1P39956 796 aa3.49□□□□□ -1.85
UBC9YDL064W SHO1P40073 367 aa3.49□□□□□ -1.85
UBC9YDL064W TFG2P41896 400 aaPredicted RBP3.49□□□□□ -1.85
UBC9YDL064W GWT1P47026 490 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms