RNA–Protein interactions for RNA: snR31

snR31, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR31, Length 225 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR31snR31 YNR029CP53729 429 aaKnown RBP11.04□□□□□ -0.64
snR31snR31 RCM1P53972 490 aa11.03□□□□□ -0.64
snR31snR31 PSK1P31374 1356 aa11.03□□□□□ -0.64
snR31snR31 RTG3P38165 486 aa11.02□□□□□ -0.65
snR31snR31 USO1P25386 1790 aa11□□□□□ -0.65
snR31snR31 CPS1P27614 576 aa10.98□□□□□ -0.65
snR31snR31 LEU2P04173 364 aaPredicted RBP10.97□□□□□ -0.65
snR31snR31 PPH3P32345 308 aa10.95□□□□□ -0.66
snR31snR31 MTR4P47047 1073 aaKnown RBP10.95□□□□□ -0.66
snR31snR31 RTF1P53064 558 aa10.94□□□□□ -0.66
snR31snR31 PDI1P17967 522 aaKnown RBP10.93□□□□□ -0.66
snR31snR31 IOC4Q04213 475 aa10.92□□□□□ -0.66
snR31snR31 THI12P42883 340 aa10.91□□□□□ -0.66
snR31snR31 THI5P43534 340 aa10.91□□□□□ -0.66
snR31snR31 THI11P47183 340 aa10.91□□□□□ -0.66
snR31snR31 THI13Q07748 340 aa10.91□□□□□ -0.66
snR31snR31 KAR2P16474 682 aaKnown RBP10.89□□□□□ -0.67
snR31snR31 GRX4P32642 244 aa10.89□□□□□ -0.67
snR31snR31 NST1P53935 1240 aa10.89□□□□□ -0.67
snR31snR31 TAP42Q04372 366 aa10.89□□□□□ -0.67
snR31snR31 YML133CQ03099 1374 aa10.89□□□□□ -0.67
snR31snR31 YLL067CQ07888 1374 aa10.89□□□□□ -0.67
snR31snR31 YLL066CQ99208 1374 aa10.89□□□□□ -0.67
snR31snR31 RPP0P05317 312 aaKnown RBP10.87□□□□□ -0.67
snR31snR31 PRS1P32895 427 aaKnown RBP10.87□□□□□ -0.67
snR31snR31 CSE4P36012 229 aa10.85□□□□□ -0.67
snR31snR31 PRP43P53131 767 aaKnown RBP10.84□□□□□ -0.67
snR31snR31 ADE6P38972 1358 aaKnown RBP10.83□□□□□ -0.68
snR31snR31 YEF3P16521 1044 aaKnown RBP10.83□□□□□ -0.68
snR31snR31 TRK1P12685 1235 aa10.82□□□□□ -0.68
snR31snR31 PAP2P53632 584 aaKnown RBP10.82□□□□□ -0.68
snR31snR31 VPS27P40343 622 aaKnown RBP10.81□□□□□ -0.68
snR31snR31 CDC45Q08032 650 aa10.81□□□□□ -0.68
snR31snR31 RPS24AP0CX31 135 aaKnown RBP10.8□□□□□ -0.68
snR31snR31 RPS24BP0CX32 135 aaKnown RBP10.8□□□□□ -0.68
snR31snR31 YDL144CQ07589 356 aa10.79□□□□□ -0.68
snR31snR31 RTR1P40084 226 aaPredicted RBP10.77□□□□□ -0.69
snR31snR31 SNF2P22082 1703 aa10.76□□□□□ -0.69
snR31snR31 DPS1P04802 557 aaKnown RBP10.76□□□□□ -0.69
snR31snR31 NOP2P40991 618 aaKnown RBP10.76□□□□□ -0.69
snR31snR31 YRB30P53107 440 aaPredicted RBP10.76□□□□□ -0.69
snR31snR31 HIM1Q06674 414 aa10.76□□□□□ -0.69
snR31snR31 GAS4Q08271 471 aa10.75□□□□□ -0.69
snR31snR31 RPO41P13433 1351 aaKnown RBP10.74□□□□□ -0.69
snR31snR31 AUS1Q08409 1394 aa10.73□□□□□ -0.69
snR31snR31 PRP5P21372 849 aaPredicted RBP10.71□□□□□ -0.69
snR31snR31 PRP45P28004 379 aaPredicted RBP10.71□□□□□ -0.69
snR31snR31 PTP3P40048 928 aa10.7□□□□□ -0.7
snR31snR31 MPP10P47083 593 aaKnown RBP10.7□□□□□ -0.7
snR31snR31 TY4B-HP0C2J7 1802 aa10.7□□□□□ -0.7
snR31snR31 TY4B-JP47024 1803 aa10.7□□□□□ -0.7
snR31snR31 YFR006WP43590 535 aa10.69□□□□□ -0.7
snR31snR31 PRD1P25375 712 aa10.68□□□□□ -0.7
snR31snR31 RRP46P53256 223 aaPredicted RBP10.68□□□□□ -0.7
snR31snR31 RVB2Q12464 471 aaKnown RBP10.68□□□□□ -0.7
snR31snR31 FPR3P38911 411 aaKnown RBP10.65□□□□□ -0.7
snR31snR31 SLM3Q12093 417 aa10.65□□□□□ -0.7
snR31snR31 SUI2P20459 304 aaKnown RBP10.64□□□□□ -0.71
snR31snR31 AKL1P38080 1108 aaKnown RBP10.64□□□□□ -0.71
snR31snR31 BUB1P41695 1021 aaKnown RBP RIP-Chip data10.64□□□□□ -0.71not detected
snR31snR31 TCB1Q12466 1186 aa10.64□□□□□ -0.71
snR31snR31 YRF1-2P40105 1681 aa10.63□□□□□ -0.71
snR31snR31 SAP155P43612 1002 aa10.63□□□□□ -0.71
snR31snR31 TPD3P31383 635 aa10.62□□□□□ -0.71
snR31snR31 CTF4Q01454 927 aa10.62□□□□□ -0.71
snR31snR31 RRP5Q05022 1729 aaKnown RBP10.61□□□□□ -0.71
snR31snR31 MSB3P48566 633 aaPredicted RBP10.61□□□□□ -0.71
snR31snR31 DSD1P53095 428 aa10.61□□□□□ -0.71
snR31snR31 THI22Q06490 572 aa10.61□□□□□ -0.71
snR31snR31 NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
snR31snR31 MAK21Q12176 1025 aaKnown RBP10.6□□□□□ -0.71
snR31snR31 APC1P53886 1748 aa10.6□□□□□ -0.71
snR31snR31 RAD2P07276 1031 aa10.59□□□□□ -0.71
snR31snR31 YFR016CP43597 1233 aaKnown RBP10.59□□□□□ -0.71
snR31snR31 FKS3Q04952 1785 aa10.58□□□□□ -0.72
snR31snR31 BUD27P43573 796 aaKnown RBP RIP-Chip data10.58□□□□□ -0.72not detected
snR31snR31 YNL050CP53952 270 aa10.58□□□□□ -0.72
snR31snR31 AOS1Q06624 347 aa10.58□□□□□ -0.72
snR31snR31 MAM1P40065 302 aa10.57□□□□□ -0.72
snR31snR31 XKS1P42826 600 aa10.57□□□□□ -0.72
snR31snR31 ZDS1P50111 915 aaKnown RBP10.57□□□□□ -0.72
snR31snR31 SIR4P11978 1358 aa10.56□□□□□ -0.72
snR31snR31 HSP104P31539 908 aaKnown RBP10.56□□□□□ -0.72
snR31snR31 ENT1Q12518 454 aa10.56□□□□□ -0.72
snR31snR31 HEF3P53978 1044 aaKnown RBP10.55□□□□□ -0.72
snR31snR31 RTT109Q07794 436 aa10.55□□□□□ -0.72
snR31snR31 YRF1-4O13559 1382 aa10.54□□□□□ -0.72
snR31snR31 RSF2P46974 1380 aa10.54□□□□□ -0.72
snR31snR31 REB1P21538 810 aa10.54□□□□□ -0.72
snR31snR31 NTH2P35172 780 aa10.54□□□□□ -0.72
snR31snR31 TFA1P36100 482 aa10.54□□□□□ -0.72
snR31snR31 FUN12P39730 1002 aaKnown RBP10.54□□□□□ -0.72
snR31snR31 GYP7P48365 746 aa10.54□□□□□ -0.72
snR31snR31 YAH1Q12184 172 aaKnown RBP10.54□□□□□ -0.72
snR31snR31 URB1P34241 1764 aaKnown RBP10.53□□□□□ -0.72
snR31snR31 MEC3Q02574 474 aa10.53□□□□□ -0.72
snR31snR31 YIL177CP40434 1758 aa10.52□□□□□ -0.73
snR31snR31 YJL225CP40889 1758 aa10.52□□□□□ -0.73
snR31snR31 UGA3P26370 528 aa10.51□□□□□ -0.73
snR31snR31 RCR1P38212 213 aa10.51□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms