RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	MET32	Q12041	191 aa		4.28	□□□□□ -1.73
RLM1	YPL089C	RAD54	P32863	898 aa		4.26	□□□□□ -1.73
RLM1	YPL089C	YJR115W	P47152	169 aa		4.26	□□□□□ -1.73
RLM1	YPL089C	YPR204W	Q08995	1032 aa		4.26	□□□□□ -1.73
RLM1	YPL089C	RRN7	P40992	514 aa		4.24	□□□□□ -1.73
RLM1	YPL089C	YLR326W	Q06170	240 aa	Known RBP	4.24	□□□□□ -1.73
RLM1	YPL089C	YLR346C	Q06139	101 aa		4.23	□□□□□ -1.73
RLM1	YPL089C	HPF1	Q05164	967 aa		4.22	□□□□□ -1.73
RLM1	YPL089C	TFB4	Q12004	338 aa		4.22	□□□□□ -1.73
RLM1	YPL089C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
RLM1	YPL089C	TY1A-DR4	O74302	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-H	P0C2I4	478 aa	Known RBP	4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-A	P0CX57	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-PR1	P0CX58	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-OR	P0CX59	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-PR2	P0CX60	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-DR5	P0CX65	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-ER2	P0CX66	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-GR3	P0CX67	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-LR1	P0CX68	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-MR2	P0CX69	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	VHR2	P40041	505 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-JR2	P47099	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-DR1	Q03856	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-ML1	Q04706	440 aa	Known RBP	4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-BR	Q12217	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-NL2	Q12470	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	TY1A-GR2	Q12485	440 aa		4.21	□□□□□ -1.74
RLM1	YPL089C	PHM7	Q12252	991 aa		4.2	□□□□□ -1.74
RLM1	YPL089C	SEC2	P17065	759 aa		4.19	□□□□□ -1.74
RLM1	YPL089C	TUM1	Q08686	304 aa	Known RBP	4.19	□□□□□ -1.74
RLM1	YPL089C	UBP14	P38237	781 aa	Known RBP	4.18	□□□□□ -1.74
RLM1	YPL089C	CSC1	Q06538	782 aa		4.17	□□□□□ -1.74
RLM1	YPL089C	OPT2	Q06593	877 aa		4.16	□□□□□ -1.74
RLM1	YPL089C	YIR007W	P40566	764 aa		4.16	□□□□□ -1.74
RLM1	YPL089C	SRF1	Q12516	437 aa		4.14	□□□□□ -1.75
RLM1	YPL089C	KIC1	P38692	1080 aa		4.14	□□□□□ -1.75
RLM1	YPL089C	GLY1	P37303	387 aa	Known RBP	4.13	□□□□□ -1.75
RLM1	YPL089C	MSB3	P48566	633 aa	Predicted RBP	4.12	□□□□□ -1.75
RLM1	YPL089C	SCW11	P53189	542 aa		4.12	□□□□□ -1.75
RLM1	YPL089C	PUS5	Q06244	254 aa		4.11	□□□□□ -1.75
RLM1	YPL089C	GAP1	P19145	602 aa	Predicted RBP	4.09	□□□□□ -1.75
RLM1	YPL089C	UGA3	P26370	528 aa		4.09	□□□□□ -1.76
RLM1	YPL089C	IFH1	P39520	1085 aa		4.08	□□□□□ -1.76
RLM1	YPL089C	DPH6	Q12429	685 aa		4.08	□□□□□ -1.76
RLM1	YPL089C	SBP1	P10080	294 aa	Known RBP	4.07	□□□□□ -1.76
RLM1	YPL089C	PTK2	P47116	818 aa	Known RBP	4.07	□□□□□ -1.76
RLM1	YPL089C	TYW1	Q08960	810 aa	Known RBP	4.07	□□□□□ -1.76
RLM1	YPL089C	MIP1	P15801	1254 aa		4.05	□□□□□ -1.76
RLM1	YPL089C	MOD5	P07884	428 aa		4.04	□□□□□ -1.76
RLM1	YPL089C	NUP85	P46673	744 aa		4.04	□□□□□ -1.76
RLM1	YPL089C	NSG2	P53898	299 aa		4.04	□□□□□ -1.76
RLM1	YPL089C	MDJ1	P35191	511 aa		4.03	□□□□□ -1.76
RLM1	YPL089C	CCT8	P47079	568 aa	Known RBP	4.03	□□□□□ -1.76
RLM1	YPL089C	TY1A-BL	Q12266	440 aa		4.03	□□□□□ -1.76
RLM1	YPL089C	PAC1	P39946	494 aa	Known RBP	4	□□□□□ -1.77
RLM1	YPL089C	KEX2	P13134	814 aa		3.98	□□□□□ -1.77
RLM1	YPL089C	LYS5	P50113	272 aa		3.98	□□□□□ -1.77
RLM1	YPL089C	SYH1	Q02875	849 aa	Known RBP	3.98	□□□□□ -1.77
RLM1	YPL089C	YDR090C	Q03193	310 aa		3.97	□□□□□ -1.77
RLM1	YPL089C	UBP2	Q01476	1272 aa		3.96	□□□□□ -1.78
RLM1	YPL089C	YPR109W	Q06104	294 aa		3.95	□□□□□ -1.78
RLM1	YPL089C	THI72	Q08579	599 aa		3.95	□□□□□ -1.78
RLM1	YPL089C	ORC6	P38826	435 aa		3.94	□□□□□ -1.78
RLM1	YPL089C	LSC2	P53312	427 aa		3.94	□□□□□ -1.78
RLM1	YPL089C	ERF2	Q06551	359 aa		3.94	□□□□□ -1.78
RLM1	YPL089C	RTT106	P40161	455 aa		3.92	□□□□□ -1.78
RLM1	YPL089C	ROG3	P43602	733 aa		3.92	□□□□□ -1.78
RLM1	YPL089C	YPR053C	Q6Q5F3	151 aa		3.92	□□□□□ -1.78
RLM1	YPL089C	AI1	P03875	834 aa		3.92	□□□□□ -1.78
RLM1	YPL089C	MVP1	P40959	511 aa	Known RBP	3.92	□□□□□ -1.78
RLM1	YPL089C	KXD1	P53158	218 aa		3.92	□□□□□ -1.78
RLM1	YPL089C	JJJ3	P47138	172 aa		3.91	□□□□□ -1.78
RLM1	YPL089C	TUB4	P53378	473 aa		3.9	□□□□□ -1.79
RLM1	YPL089C	TY1A-MR1	Q04215	440 aa		3.9	□□□□□ -1.79
RLM1	YPL089C	ARG82	P07250	355 aa		3.88	□□□□□ -1.79
RLM1	YPL089C	SET1	P38827	1080 aa	Known RBP	3.88	□□□□□ -1.79
RLM1	YPL089C	TPD3	P31383	635 aa		3.87	□□□□□ -1.79
RLM1	YPL089C	AGE1	Q04412	482 aa		3.87	□□□□□ -1.79
RLM1	YPL089C	KIP2	P28743	706 aa		3.86	□□□□□ -1.79
RLM1	YPL089C	YFL066C	P43538	392 aa		3.85	□□□□□ -1.79
RLM1	YPL089C	OSH7	P38755	437 aa		3.83	□□□□□ -1.8
RLM1	YPL089C	TCB1	Q12466	1186 aa		3.83	□□□□□ -1.8
RLM1	YPL089C	CCP1	P00431	361 aa		3.83	□□□□□ -1.8
RLM1	YPL089C	HXT10	P43581	546 aa		3.83	□□□□□ -1.8
RLM1	YPL089C	RGR1	P19263	1082 aa		3.82	□□□□□ -1.8
RLM1	YPL089C	IRC24	P40580	263 aa		3.82	□□□□□ -1.8
RLM1	YPL089C	AAD14	P42884	376 aa		3.82	□□□□□ -1.8
RLM1	YPL089C	MRT4	P33201	236 aa	Known RBP	3.82	□□□□□ -1.8
RLM1	YPL089C	YJR098C	P47139	656 aa		3.82	□□□□□ -1.8
RLM1	YPL089C	IXR1	P33417	597 aa		3.81	□□□□□ -1.8
RLM1	YPL089C	DMA1	P38823	416 aa		3.8	□□□□□ -1.8
RLM1	YPL089C	SKN7	P38889	622 aa		3.8	□□□□□ -1.8
RLM1	YPL089C	MAC1	P35192	417 aa		3.79	□□□□□ -1.8
RLM1	YPL089C	REF2	P42073	533 aa	Predicted RBP	3.79	□□□□□ -1.8
RLM1	YPL089C	RTF1	P53064	558 aa		3.79	□□□□□ -1.8
RLM1	YPL089C	YMR187C	Q03236	431 aa		3.79	□□□□□ -1.8
RLM1	YPL089C	DLD1	P32891	587 aa		3.78	□□□□□ -1.8
RLM1	YPL089C	PDC1	P06169	563 aa	Known RBP	3.76	□□□□□ -1.81
RLM1	YPL089C	YNL115C	P53925	644 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms