RNA–Protein interactions for RNA: YOR217W

RFC1, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeast

Gene RFC1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFC1	YOR217W	TOM20	P35180	183 aa		10.17	□□□□□ -0.78
RFC1	YOR217W	IES2	P40154	320 aa		10.17	□□□□□ -0.78
RFC1	YOR217W	CTF4	Q01454	927 aa		10.16	□□□□□ -0.78
RFC1	YOR217W	ALD4	P46367	519 aa	Known RBP	10.16	□□□□□ -0.78
RFC1	YOR217W	SSF2	Q12153	453 aa	Predicted RBP	10.15	□□□□□ -0.78
RFC1	YOR217W	SIC1	P38634	284 aa		10.14	□□□□□ -0.79
RFC1	YOR217W	PPX1	P38698	397 aa		10.14	□□□□□ -0.79
RFC1	YOR217W	YAF9	P53930	226 aa		10.14	□□□□□ -0.79
RFC1	YOR217W	SYH1	Q02875	849 aa	Known RBP	10.14	□□□□□ -0.79
RFC1	YOR217W	OCA1	P50946	238 aa	Predicted RBP	10.13	□□□□□ -0.79
RFC1	YOR217W	NST1	P53935	1240 aa		10.13	□□□□□ -0.79
RFC1	YOR217W	AVO1	Q08236	1176 aa		10.13	□□□□□ -0.79
RFC1	YOR217W	TPS3	P38426	1054 aa	Known RBP	10.12	□□□□□ -0.79
RFC1	YOR217W	MET10	P39692	1035 aa		10.12	□□□□□ -0.79
RFC1	YOR217W	HOS2	P53096	452 aa	Predicted RBP	10.12	□□□□□ -0.79
RFC1	YOR217W	RPL17A	P05740	184 aa	Known RBP	10.12	□□□□□ -0.79
RFC1	YOR217W	MRF1	P30775	413 aa	Predicted RBP	10.12	□□□□□ -0.79
RFC1	YOR217W	MGA2	P40578	1113 aa		10.12	□□□□□ -0.79
RFC1	YOR217W	TIM11	P81449	96 aa	Predicted RBP	10.12	□□□□□ -0.79
RFC1	YOR217W	ERP2	P39704	215 aa		10.11	□□□□□ -0.79
RFC1	YOR217W	OPI1	P21957	404 aa		10.11	□□□□□ -0.79
RFC1	YOR217W	BFA1	P47113	574 aa		10.11	□□□□□ -0.79
RFC1	YOR217W	DNM1	P54861	757 aa		10.11	□□□□□ -0.79
RFC1	YOR217W	ESL2	P36168	1195 aa		10.1	□□□□□ -0.79
RFC1	YOR217W	MAL31	P38156	614 aa		10.1	□□□□□ -0.79
RFC1	YOR217W	RIX1	P38883	763 aa	Predicted RBP	10.1	□□□□□ -0.79
RFC1	YOR217W	SWR1	Q05471	1514 aa		10.1	□□□□□ -0.79
RFC1	YOR217W	TPM2	P40414	161 aa		10.1	□□□□□ -0.79
RFC1	YOR217W	RAD17	P48581	401 aa		10.1	□□□□□ -0.79
RFC1	YOR217W	RSC2	Q06488	889 aa		10.1	□□□□□ -0.79
RFC1	YOR217W	RRN6	P32786	894 aa		10.09	□□□□□ -0.79
RFC1	YOR217W	CHD1	P32657	1468 aa		10.09	□□□□□ -0.79
RFC1	YOR217W	DSF2	P38213	736 aa		10.09	□□□□□ -0.79
RFC1	YOR217W	MEP1	P40260	492 aa		10.09	□□□□□ -0.79
RFC1	YOR217W	DBP10	Q12389	995 aa	Known RBP	10.09	□□□□□ -0.79
RFC1	YOR217W	ERP4	Q12450	207 aa		10.09	□□□□□ -0.79
RFC1	YOR217W	HIR3	P47171	1648 aa		10.09	□□□□□ -0.79
RFC1	YOR217W	YPR172W	Q06608	200 aa		10.08	□□□□□ -0.8
RFC1	YOR217W	PET111	P08468	800 aa		10.08	□□□□□ -0.8
RFC1	YOR217W	MSH4	P40965	878 aa	Predicted RBP	10.07	□□□□□ -0.8
RFC1	YOR217W	MUM2	P38236	366 aa		10.07	□□□□□ -0.8
RFC1	YOR217W	SMD2	Q06217	110 aa	Known RBP	10.07	□□□□□ -0.8
RFC1	YOR217W	SIN3	P22579	1536 aa		10.06	□□□□□ -0.8
RFC1	YOR217W	SEC23	P15303	768 aa	Known RBP	10.06	□□□□□ -0.8
RFC1	YOR217W	RPL5	P26321	297 aa	Known RBP	10.06	□□□□□ -0.8
RFC1	YOR217W	LAM1	P38851	1228 aa		10.06	□□□□□ -0.8
RFC1	YOR217W	RPL17B	P46990	184 aa	Known RBP	10.06	□□□□□ -0.8
RFC1	YOR217W	PAP2	P53632	584 aa	Known RBP	10.06	□□□□□ -0.8
RFC1	YOR217W	REX2	P54964	269 aa	Known RBP	10.06	□□□□□ -0.8
RFC1	YOR217W	LTV1	P34078	463 aa		10.05	□□□□□ -0.8
RFC1	YOR217W	RRP9	Q06506	573 aa	Known RBP	10.05	□□□□□ -0.8
RFC1	YOR217W	SUB2	Q07478	446 aa	Known RBP	10.05	□□□□□ -0.8
RFC1	YOR217W	HSP42	Q12329	375 aa		10.05	□□□□□ -0.8
RFC1	YOR217W	PHO87	P25360	923 aa		10.05	□□□□□ -0.8
RFC1	YOR217W	YOL057W	Q08225	711 aa		10.04	□□□□□ -0.8
RFC1	YOR217W	NFI1	Q12216	726 aa		10.04	□□□□□ -0.8
RFC1	YOR217W	PRI1	P10363	409 aa		10.04	□□□□□ -0.8
RFC1	YOR217W	VPS27	P40343	622 aa	Known RBP	10.04	□□□□□ -0.8
RFC1	YOR217W	BNI5	P53890	448 aa	Known RBP	10.04	□□□□□ -0.8
RFC1	YOR217W	VTC3	Q02725	835 aa		10.04	□□□□□ -0.8
RFC1	YOR217W	SEC6	P32844	805 aa		10.03	□□□□□ -0.8
RFC1	YOR217W	OPY1	P38271	328 aa		10.03	□□□□□ -0.8
RFC1	YOR217W	SEN54	Q02825	467 aa	Predicted RBP	10.03	□□□□□ -0.8
RFC1	YOR217W	CEX1	Q12453	761 aa		10.03	□□□□□ -0.8
RFC1	YOR217W	ALD2	P47771	506 aa		10.03	□□□□□ -0.8
RFC1	YOR217W	RPC82	P32349	654 aa		10.02	□□□□□ -0.81
RFC1	YOR217W	VID30	P53076	958 aa		10.02	□□□□□ -0.81
RFC1	YOR217W	COG4	Q06096	861 aa		10.02	□□□□□ -0.81
RFC1	YOR217W	ALD3	P54114	506 aa		10.02	□□□□□ -0.81
RFC1	YOR217W	TMA64	Q04600	565 aa	Known RBP	10.02	□□□□□ -0.81
RFC1	YOR217W	MPH3	P0CE00	602 aa		10.01	□□□□□ -0.81
RFC1	YOR217W	YHR218W	P38899	603 aa		10.01	□□□□□ -0.81
RFC1	YOR217W	RAD26	P40352	1085 aa		10.01	□□□□□ -0.81
RFC1	YOR217W	ELA1	P53861	379 aa	Predicted RBP	10.01	□□□□□ -0.81
RFC1	YOR217W	THO2	P53552	1597 aa	Known RBP	10.01	□□□□□ -0.81
RFC1	YOR217W	CST6	P40535	587 aa		10.01	□□□□□ -0.81
RFC1	YOR217W	GGA1	Q06336	557 aa		10.01	□□□□□ -0.81
RFC1	YOR217W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	10.01	□□□□□ -0.81	not detected
RFC1	YOR217W	PRP43	P53131	767 aa	Known RBP	10	□□□□□ -0.81
RFC1	YOR217W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10	□□□□□ -0.81	not detected
RFC1	YOR217W	TY4B-P	A0A0B7P3V8	1104 aa		9.99	□□□□□ -0.81
RFC1	YOR217W	TY4A-H	Q6Q5P6	413 aa		9.99	□□□□□ -0.81
RFC1	YOR217W	STE5	P32917	917 aa		9.99	□□□□□ -0.81
RFC1	YOR217W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	9.99	□□□□□ -0.81	not detected
RFC1	YOR217W	NOC2	P39744	710 aa	Known RBP	9.99	□□□□□ -0.81
RFC1	YOR217W	CLC1	P17891	233 aa		9.98	□□□□□ -0.81
RFC1	YOR217W	NPR3	P38742	1146 aa		9.98	□□□□□ -0.81
RFC1	YOR217W	IRC3	Q06683	689 aa		9.97	□□□□□ -0.81
RFC1	YOR217W	GPI8	P49018	411 aa		9.97	□□□□□ -0.81
RFC1	YOR217W	WHI5	Q12416	295 aa		9.97	□□□□□ -0.81
RFC1	YOR217W	PRP3	Q03338	469 aa	Predicted RBP	9.96	□□□□□ -0.81
RFC1	YOR217W	UGA3	P26370	528 aa		9.96	□□□□□ -0.82
RFC1	YOR217W	PEX5	P35056	612 aa		9.96	□□□□□ -0.82
RFC1	YOR217W	ACP1	P32463	125 aa		9.95	□□□□□ -0.82
RFC1	YOR217W	GCD6	P32501	712 aa	Known RBP	9.95	□□□□□ -0.82
RFC1	YOR217W	TFB4	Q12004	338 aa		9.95	□□□□□ -0.82
RFC1	YOR217W	XRN1	P22147	1528 aa	Known RBP	9.95	□□□□□ -0.82
RFC1	YOR217W	MDM1	Q01846	1127 aa		9.95	□□□□□ -0.82
RFC1	YOR217W	SPO71	Q03868	1245 aa		9.95	□□□□□ -0.82
RFC1	YOR217W	RRB1	Q04225	511 aa	Known RBP	9.95	□□□□□ -0.82

Retrieved 100 of 5,963 RNA–protein pairs in 33 ms