RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeastyeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA49YNL248C PEX29Q03370 554 aa7.35□□□□□ -1.23
RPA49YNL248C TY1B-HO13535 1793 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-DR5P0C2I2 1755 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-DR6P0C2I3 1755 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-LR2P0C2I5 1755 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-LR3P0C2I6 1755 aaKnown RBP7.33□□□□□ -1.24
RPA49YNL248C TY1B-PR1P0C2I9 1755 aaKnown RBP7.33□□□□□ -1.24
RPA49YNL248C TY1B-PR2P0C2J0 1756 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-PR3P0C2J1 1755 aaKnown RBP7.33□□□□□ -1.24
RPA49YNL248C TY1B-JR1P47098 1755 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-ML2Q03434 1755 aaKnown RBP7.33□□□□□ -1.24
RPA49YNL248C TY1B-ER1Q03612 1755 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-ML1Q04711 1755 aaKnown RBP7.33□□□□□ -1.24
RPA49YNL248C TY1B-BRQ12193 1756 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-GR2Q12269 1755 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-OLQ12273 1755 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-GR3Q12316 1755 aa7.33□□□□□ -1.24
RPA49YNL248C TY1B-PLQ12414 1755 aaKnown RBP7.33□□□□□ -1.24
RPA49YNL248C TY1B-ORQ92393 1755 aa7.33□□□□□ -1.24
RPA49YNL248C SSM4P40318 1319 aa7.33□□□□□ -1.24
RPA49YNL248C DPS1P04802 557 aaKnown RBP7.33□□□□□ -1.24
RPA49YNL248C YGR273CP53329 174 aa7.32□□□□□ -1.24
RPA49YNL248C HAP5Q02516 242 aa7.32□□□□□ -1.24
RPA49YNL248C NOP53Q12080 455 aaKnown RBP7.32□□□□□ -1.24
RPA49YNL248C ULS1Q08562 1619 aa7.3□□□□□ -1.24
RPA49YNL248C SNT2P53127 1403 aa7.29□□□□□ -1.24
RPA49YNL248C BNI4P53858 892 aa7.29□□□□□ -1.24
RPA49YNL248C MPC54Q08550 464 aa7.28□□□□□ -1.24
RPA49YNL248C ESC1Q03661 1658 aaKnown RBP7.27□□□□□ -1.25
RPA49YNL248C YML082WQ04533 649 aaKnown RBP7.26□□□□□ -1.25
RPA49YNL248C NUP170P38181 1502 aa7.26□□□□□ -1.25
RPA49YNL248C GEA2P39993 1459 aaKnown RBP7.24□□□□□ -1.25
RPA49YNL248C SLI15P38283 698 aa7.24□□□□□ -1.25
RPA49YNL248C PTC2P39966 464 aaKnown RBP7.24□□□□□ -1.25
RPA49YNL248C CKB1P43639 278 aa7.23□□□□□ -1.25
RPA49YNL248C NMA111P53920 997 aa7.23□□□□□ -1.25
RPA49YNL248C VPS15P22219 1454 aa7.23□□□□□ -1.25
RPA49YNL248C TY1B-JR2P47100 1755 aaKnown RBP7.23□□□□□ -1.25
RPA49YNL248C TY1B-ER2Q03619 1755 aa7.23□□□□□ -1.25
RPA49YNL248C TY1B-MR1Q04214 1755 aa7.23□□□□□ -1.25
RPA49YNL248C TY1B-MR2Q04670 1755 aaKnown RBP7.23□□□□□ -1.25
RPA49YNL248C TY1B-LR1Q12088 1755 aaKnown RBP7.23□□□□□ -1.25
RPA49YNL248C TY1B-NL1Q12112 1755 aa7.23□□□□□ -1.25
RPA49YNL248C TY1B-GR1Q12141 1755 aa7.23□□□□□ -1.25
RPA49YNL248C TY1B-BLQ12490 1755 aa7.23□□□□□ -1.25
RPA49YNL248C CAT8P39113 1433 aa7.22□□□□□ -1.25
RPA49YNL248C TY3B-GQ99315 1547 aa7.22□□□□□ -1.25
RPA49YNL248C DNF1P32660 1571 aa7.21□□□□□ -1.25
RPA49YNL248C MET10P39692 1035 aa7.21□□□□□ -1.26
RPA49YNL248C NUP159P40477 1460 aa7.2□□□□□ -1.26
RPA49YNL248C RPA190P10964 1664 aaKnown RBP7.19□□□□□ -1.26
RPA49YNL248C NTE1Q04958 1679 aa7.19□□□□□ -1.26
RPA49YNL248C SRC1Q03707 834 aa7.19□□□□□ -1.26
RPA49YNL248C DPL1Q05567 589 aa7.18□□□□□ -1.26
RPA49YNL248C POL5P39985 1022 aaKnown RBP7.17□□□□□ -1.26
RPA49YNL248C RPO21P04050 1733 aaKnown RBP7.17□□□□□ -1.26
RPA49YNL248C IRC20Q06554 1556 aa7.16□□□□□ -1.26
RPA49YNL248C BUD21Q08492 214 aaPredicted RBP7.16□□□□□ -1.26
RPA49YNL248C SRB8P25648 1427 aa7.16□□□□□ -1.26
RPA49YNL248C KEX1P09620 729 aa7.15□□□□□ -1.26
RPA49YNL248C YPR015CQ12531 247 aa7.15□□□□□ -1.26
RPA49YNL248C NUP157P40064 1391 aaKnown RBP7.15□□□□□ -1.26
RPA49YNL248C YBT1P32386 1661 aa7.15□□□□□ -1.27
RPA49YNL248C GDB1Q06625 1536 aa7.12□□□□□ -1.27
RPA49YNL248C RAM1P22007 431 aa7.12□□□□□ -1.27
RPA49YNL248C NOP7P53261 605 aaKnown RBP7.11□□□□□ -1.27
RPA49YNL248C ISU2Q12056 156 aa7.11□□□□□ -1.27
RPA49YNL248C PDR10P51533 1564 aa7.11□□□□□ -1.27
RPA49YNL248C MET5P47169 1442 aa7.1□□□□□ -1.27
RPA49YNL248C ARO1P08566 1588 aaKnown RBP7.09□□□□□ -1.27
RPA49YNL248C RAS1P01119 309 aa7.09□□□□□ -1.27
RPA49YNL248C CDC73Q06697 393 aa7.09□□□□□ -1.27
RPA49YNL248C PDR12Q02785 1511 aa7.08□□□□□ -1.28
RPA49YNL248C PAF1P38351 445 aa7.08□□□□□ -1.28
RPA49YNL248C UBP14P38237 781 aaKnown RBP7.07□□□□□ -1.28
RPA49YNL248C YLR326WQ06170 240 aaKnown RBP7.07□□□□□ -1.28
RPA49YNL248C MMS1Q06211 1407 aa7.07□□□□□ -1.28
RPA49YNL248C SPO14P36126 1683 aa7.06□□□□□ -1.28
RPA49YNL248C SET1P38827 1080 aaKnown RBP7.06□□□□□ -1.28
RPA49YNL248C BUD3P25558 1636 aa7.05□□□□□ -1.28
RPA49YNL248C PDR1P12383 1068 aa7.03□□□□□ -1.28
RPA49YNL248C YRF1-1P0CX20 1796 aa7.03□□□□□ -1.28
RPA49YNL248C YRF1-5P0CX21 1796 aa7.03□□□□□ -1.28
RPA49YNL248C YRF1-8P0CX22 1796 aa7.03□□□□□ -1.28
RPA49YNL248C YSP2Q06681 1438 aa7.02□□□□□ -1.29
RPA49YNL248C PCS60P38137 543 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
RPA49YNL248C VHR2P40041 505 aa7.02□□□□□ -1.29
RPA49YNL248C BNR1P40450 1375 aa7.02□□□□□ -1.29
RPA49YNL248C IQG1Q12280 1495 aa7.02□□□□□ -1.29
RPA49YNL248C GCN2P15442 1659 aa7.01□□□□□ -1.29
RPA49YNL248C GYP1Q08484 637 aa7.01□□□□□ -1.29
RPA49YNL248C ORC1P54784 914 aaPredicted RBP6.99□□□□□ -1.29
RPA49YNL248C SEC3P33332 1336 aaKnown RBP6.99□□□□□ -1.29
RPA49YNL248C SDH2P21801 266 aa6.98□□□□□ -1.29
RPA49YNL248C AMS1P22855 1083 aa6.98□□□□□ -1.29
RPA49YNL248C RAD54P32863 898 aa6.98□□□□□ -1.29
RPA49YNL248C ENP1P38333 483 aaKnown RBP6.98□□□□□ -1.29
RPA49YNL248C RGA2Q06407 1009 aa6.96□□□□□ -1.3
RPA49YNL248C SPT7P35177 1332 aa6.96□□□□□ -1.3
RPA49YNL248C SAS4Q04003 481 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms