RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	FUN12	P39730	1002 aa	Known RBP	6.01	□□□□□ -1.45
SSB2	YNL209W	RCM1	P53972	490 aa		6.01	□□□□□ -1.45
SSB2	YNL209W	FKH1	P40466	484 aa		6	□□□□□ -1.45
SSB2	YNL209W	TRK1	P12685	1235 aa		5.99	□□□□□ -1.45
SSB2	YNL209W	NAP1	P25293	417 aa	Known RBP	5.99	□□□□□ -1.45
SSB2	YNL209W	YML133C	Q03099	1374 aa		5.99	□□□□□ -1.45
SSB2	YNL209W	YLL067C	Q07888	1374 aa		5.99	□□□□□ -1.45
SSB2	YNL209W	YLL066C	Q99208	1374 aa		5.99	□□□□□ -1.45
SSB2	YNL209W	YEF3	P16521	1044 aa	Known RBP	5.99	□□□□□ -1.45
SSB2	YNL209W	PPH3	P32345	308 aa		5.99	□□□□□ -1.45
SSB2	YNL209W	RPS0B	P46654	252 aa	Known RBP	5.99	□□□□□ -1.45
SSB2	YNL209W	MAK10	Q02197	733 aa		5.99	□□□□□ -1.45
SSB2	YNL209W	KRI1	P42846	591 aa	Known RBP	5.98	□□□□□ -1.45
SSB2	YNL209W	DIP2	Q12220	943 aa	Predicted RBP	5.98	□□□□□ -1.45
SSB2	YNL209W	SCT1	P32784	759 aa		5.97	□□□□□ -1.45
SSB2	YNL209W	CFT1	Q06632	1357 aa	Known RBP	5.97	□□□□□ -1.45
SSB2	YNL209W	HAP1	P0CE41	1502 aa		5.97	□□□□□ -1.45
SSB2	YNL209W	MLP1	Q02455	1875 aa	Known RBP	5.97	□□□□□ -1.45
SSB2	YNL209W	YRB30	P53107	440 aa	Predicted RBP	5.96	□□□□□ -1.46
SSB2	YNL209W	IOC4	Q04213	475 aa		5.96	□□□□□ -1.46
SSB2	YNL209W	YPR148C	Q06523	435 aa		5.94	□□□□□ -1.46
SSB2	YNL209W	YDL144C	Q07589	356 aa		5.94	□□□□□ -1.46
SSB2	YNL209W	YNR029C	P53729	429 aa	Known RBP	5.93	□□□□□ -1.46
SSB2	YNL209W	CPS1	P27614	576 aa		5.92	□□□□□ -1.46
SSB2	YNL209W	PSK1	P31374	1356 aa		5.92	□□□□□ -1.46
SSB2	YNL209W	MPP10	P47083	593 aa	Known RBP	5.92	□□□□□ -1.46
SSB2	YNL209W	RRP46	P53256	223 aa	Predicted RBP	5.92	□□□□□ -1.46
SSB2	YNL209W	HIM1	Q06674	414 aa		5.92	□□□□□ -1.46
SSB2	YNL209W	RVB2	Q12464	471 aa	Known RBP	5.92	□□□□□ -1.46
SSB2	YNL209W	CWC22	P53333	577 aa	Known RBP	5.91	□□□□□ -1.46
SSB2	YNL209W	USO1	P25386	1790 aa		5.91	□□□□□ -1.46
SSB2	YNL209W	KAR2	P16474	682 aa	Known RBP	5.9	□□□□□ -1.46
SSB2	YNL209W	LEU2	P04173	364 aa	Predicted RBP	5.9	□□□□□ -1.47
SSB2	YNL209W	SUI2	P20459	304 aa	Known RBP	5.9	□□□□□ -1.47
SSB2	YNL209W	VPS27	P40343	622 aa	Known RBP	5.9	□□□□□ -1.47
SSB2	YNL209W	PAP2	P53632	584 aa	Known RBP	5.9	□□□□□ -1.47
SSB2	YNL209W	CDC45	Q08032	650 aa		5.9	□□□□□ -1.47
SSB2	YNL209W	RPS24A	P0CX31	135 aa	Known RBP	5.89	□□□□□ -1.47
SSB2	YNL209W	RPS24B	P0CX32	135 aa	Known RBP	5.89	□□□□□ -1.47
SSB2	YNL209W	AUS1	Q08409	1394 aa		5.89	□□□□□ -1.47
SSB2	YNL209W	SNF2	P22082	1703 aa		5.89	□□□□□ -1.47
SSB2	YNL209W	RTR1	P40084	226 aa	Predicted RBP	5.88	□□□□□ -1.47
SSB2	YNL209W	RPP0	P05317	312 aa	Known RBP	5.88	□□□□□ -1.47
SSB2	YNL209W	PDI1	P17967	522 aa	Known RBP	5.88	□□□□□ -1.47
SSB2	YNL209W	GAS4	Q08271	471 aa		5.88	□□□□□ -1.47
SSB2	YNL209W	CSE4	P36012	229 aa		5.87	□□□□□ -1.47
SSB2	YNL209W	MTR4	P47047	1073 aa	Known RBP	5.87	□□□□□ -1.47
SSB2	YNL209W	TAP42	Q04372	366 aa		5.85	□□□□□ -1.47
SSB2	YNL209W	THI12	P42883	340 aa		5.85	□□□□□ -1.47
SSB2	YNL209W	THI5	P43534	340 aa		5.85	□□□□□ -1.47
SSB2	YNL209W	SAP155	P43612	1002 aa		5.85	□□□□□ -1.47
SSB2	YNL209W	THI11	P47183	340 aa		5.85	□□□□□ -1.47
SSB2	YNL209W	RTF1	P53064	558 aa		5.85	□□□□□ -1.47
SSB2	YNL209W	THI22	Q06490	572 aa		5.85	□□□□□ -1.47
SSB2	YNL209W	THI13	Q07748	340 aa		5.85	□□□□□ -1.47
SSB2	YNL209W	DPS1	P04802	557 aa	Known RBP	5.84	□□□□□ -1.47
SSB2	YNL209W	PRD1	P25375	712 aa		5.84	□□□□□ -1.47
SSB2	YNL209W	TPD3	P31383	635 aa		5.84	□□□□□ -1.47
SSB2	YNL209W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.84	□□□□□ -1.47
SSB2	YNL209W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
SSB2	YNL209W	ADE6	P38972	1358 aa	Known RBP	5.83	□□□□□ -1.48
SSB2	YNL209W	GRX4	P32642	244 aa		5.82	□□□□□ -1.48
SSB2	YNL209W	RTT109	Q07794	436 aa		5.82	□□□□□ -1.48
SSB2	YNL209W	YMR196W	Q04336	1088 aa		5.81	□□□□□ -1.48
SSB2	YNL209W	DAL5	P15365	543 aa		5.81	□□□□□ -1.48
SSB2	YNL209W	HEF3	P53978	1044 aa	Known RBP	5.81	□□□□□ -1.48
SSB2	YNL209W	PRP43	P53131	767 aa	Known RBP	5.8	□□□□□ -1.48
SSB2	YNL209W	TY4B-H	P0C2J7	1802 aa		5.8	□□□□□ -1.48
SSB2	YNL209W	TY4B-J	P47024	1803 aa		5.8	□□□□□ -1.48
SSB2	YNL209W	FPR3	P38911	411 aa	Known RBP	5.79	□□□□□ -1.48
SSB2	YNL209W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
SSB2	YNL209W	RPO41	P13433	1351 aa	Known RBP	5.79	□□□□□ -1.48
SSB2	YNL209W	AKL1	P38080	1108 aa	Known RBP	5.78	□□□□□ -1.48
SSB2	YNL209W	YIL177C	P40434	1758 aa		5.77	□□□□□ -1.49
SSB2	YNL209W	YJL225C	P40889	1758 aa		5.77	□□□□□ -1.49
SSB2	YNL209W	RAD2	P07276	1031 aa		5.77	□□□□□ -1.49
SSB2	YNL209W	RPC31	P17890	251 aa		5.77	□□□□□ -1.49
SSB2	YNL209W	YIL092W	P40497	633 aa		5.77	□□□□□ -1.49
SSB2	YNL209W	PRP45	P28004	379 aa	Predicted RBP	5.76	□□□□□ -1.49
SSB2	YNL209W	YBR287W	P38355	427 aa		5.76	□□□□□ -1.49
SSB2	YNL209W	RRP5	Q05022	1729 aa	Known RBP	5.76	□□□□□ -1.49
SSB2	YNL209W	YRF1-4	O13559	1382 aa		5.76	□□□□□ -1.49
SSB2	YNL209W	DSD1	P53095	428 aa		5.76	□□□□□ -1.49
SSB2	YNL209W	APC1	P53886	1748 aa		5.75	□□□□□ -1.49
SSB2	YNL209W	PRP5	P21372	849 aa	Predicted RBP	5.75	□□□□□ -1.49
SSB2	YNL209W	YRF1-2	P40105	1681 aa		5.74	□□□□□ -1.49
SSB2	YNL209W	HSP104	P31539	908 aa	Known RBP	5.74	□□□□□ -1.49
SSB2	YNL209W	RRT14	P40470	206 aa		5.74	□□□□□ -1.49
SSB2	YNL209W	MSB3	P48566	633 aa	Predicted RBP	5.74	□□□□□ -1.49
SSB2	YNL209W	POL32	P47110	350 aa		5.74	□□□□□ -1.49
SSB2	YNL209W	PUF6	Q04373	656 aa	Known RBP	5.73	□□□□□ -1.49
SSB2	YNL209W	NTH2	P35172	780 aa		5.72	□□□□□ -1.49
SSB2	YNL209W	ENV11	P53246	860 aa		5.72	□□□□□ -1.49
SSB2	YNL209W	SIR4	P11978	1358 aa		5.72	□□□□□ -1.49
SSB2	YNL209W	DEF1	P35732	738 aa	Known RBP	5.71	□□□□□ -1.49
SSB2	YNL209W	GYP7	P48365	746 aa		5.71	□□□□□ -1.49
SSB2	YNL209W	ZDS1	P50111	915 aa	Known RBP	5.71	□□□□□ -1.49
SSB2	YNL209W	SLM3	Q12093	417 aa		5.71	□□□□□ -1.49
SSB2	YNL209W	MAK21	Q12176	1025 aa	Known RBP	5.71	□□□□□ -1.49
SSB2	YNL209W	TRP5	P00931	707 aa	Known RBP	5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms