RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeastyeast

Gene LST8, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LST8YNL006W RSM7P47150 247 aa8.31□□□□□ -1.08
LST8YNL006W MAK10Q02197 733 aa8.31□□□□□ -1.08
LST8YNL006W TYS1P36421 394 aaKnown RBP8.3□□□□□ -1.08
LST8YNL006W SSP1P38871 571 aa8.29□□□□□ -1.08
LST8YNL006W HAP1P0CE41 1502 aa8.29□□□□□ -1.08
LST8YNL006W PDR11P40550 1411 aa8.29□□□□□ -1.08
LST8YNL006W NSR1P27476 414 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08 RIP-Chip
LST8YNL006W IPL1P38991 367 aa8.28□□□□□ -1.08
LST8YNL006W AI2P03876 854 aa8.26□□□□□ -1.09
LST8YNL006W TY1B-NL2Q99337 1749 aaKnown RBP8.26□□□□□ -1.09
LST8YNL006W BBC1P47068 1157 aa8.25□□□□□ -1.09
LST8YNL006W URN1Q06525 465 aaKnown RBP8.25□□□□□ -1.09
LST8YNL006W YOR238WQ08634 303 aa8.25□□□□□ -1.09
LST8YNL006W YAH1Q12184 172 aaKnown RBP8.24□□□□□ -1.09
LST8YNL006W YBL029C-AQ3E756 94 aa8.22□□□□□ -1.09
LST8YNL006W NUP192P47054 1683 aa8.2□□□□□ -1.1
LST8YNL006W YAP5P40574 245 aa8.16□□□□□ -1.1
LST8YNL006W THI12P42883 340 aa8.14□□□□□ -1.11
LST8YNL006W THI5P43534 340 aa8.14□□□□□ -1.11
LST8YNL006W THI11P47183 340 aa8.14□□□□□ -1.11
LST8YNL006W YLR271WQ06152 274 aa8.14□□□□□ -1.11
LST8YNL006W THI13Q07748 340 aa8.14□□□□□ -1.11
LST8YNL006W KRE5P22023 1365 aa8.13□□□□□ -1.11
LST8YNL006W VNX1P42839 908 aa8.13□□□□□ -1.11
LST8YNL006W BCK1Q01389 1478 aa8.1□□□□□ -1.11
LST8YNL006W RAV1P47104 1357 aa8.09□□□□□ -1.12
LST8YNL006W PSD2P53037 1138 aaKnown RBP8.08□□□□□ -1.12
LST8YNL006W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
LST8YNL006W CFT1Q06632 1357 aaKnown RBP8.07□□□□□ -1.12
LST8YNL006W YMR196WQ04336 1088 aa8.06□□□□□ -1.12
LST8YNL006W RAD9P14737 1309 aa8.04□□□□□ -1.12
LST8YNL006W RIA1P53893 1110 aa8.04□□□□□ -1.12
LST8YNL006W TY3B-IQ7LHG5 1498 aaKnown RBP8.02□□□□□ -1.13
LST8YNL006W SPP1Q03012 353 aa8.02□□□□□ -1.13
LST8YNL006W WSC3Q12215 556 aa8.02□□□□□ -1.13
LST8YNL006W CAB1Q04430 367 aa8.01□□□□□ -1.13
LST8YNL006W RTC1Q08281 1341 aa8.01□□□□□ -1.13
LST8YNL006W TY4B-HP0C2J7 1802 aa7.99□□□□□ -1.13
LST8YNL006W TY4B-JP47024 1803 aa7.99□□□□□ -1.13
LST8YNL006W PAF1P38351 445 aa7.99□□□□□ -1.13
LST8YNL006W MRX12P47084 519 aa7.99□□□□□ -1.13
LST8YNL006W YNR029CP53729 429 aaKnown RBP7.98□□□□□ -1.13
LST8YNL006W RRP5Q05022 1729 aaKnown RBP7.95□□□□□ -1.14
LST8YNL006W TIF11P38912 153 aaKnown RBP7.95□□□□□ -1.14
LST8YNL006W GTT3P39996 337 aa7.95□□□□□ -1.14
LST8YNL006W NOP7P53261 605 aaKnown RBP7.95□□□□□ -1.14
LST8YNL006W MRM1P25270 412 aa7.94□□□□□ -1.14
LST8YNL006W MGA2P40578 1113 aa7.94□□□□□ -1.14
LST8YNL006W ALD4P46367 519 aaKnown RBP7.94□□□□□ -1.14
LST8YNL006W YRF1-2P40105 1681 aa7.94□□□□□ -1.14
LST8YNL006W AIR2Q12476 344 aaKnown RBP7.93□□□□□ -1.14
LST8YNL006W FKH1P40466 484 aa7.92□□□□□ -1.14
LST8YNL006W APP1P53933 587 aa7.91□□□□□ -1.14
LST8YNL006W PIB1Q06651 286 aa7.91□□□□□ -1.14
LST8YNL006W TAF5P38129 798 aa7.9□□□□□ -1.14
LST8YNL006W TAF8Q03750 510 aa7.87□□□□□ -1.15
LST8YNL006W YIL177CP40434 1758 aa7.87□□□□□ -1.15
LST8YNL006W YJL225CP40889 1758 aa7.87□□□□□ -1.15
LST8YNL006W CST9Q06032 482 aa7.86□□□□□ -1.15
LST8YNL006W RCM1P53972 490 aa7.85□□□□□ -1.15
LST8YNL006W IOC2Q12072 812 aa7.85□□□□□ -1.15
LST8YNL006W PPH3P32345 308 aa7.83□□□□□ -1.16
LST8YNL006W ULI1P43604 169 aa7.83□□□□□ -1.16
LST8YNL006W ESL2P36168 1195 aa7.82□□□□□ -1.16
LST8YNL006W LEO1P38439 464 aa7.82□□□□□ -1.16
LST8YNL006W VPS29P38759 282 aa7.82□□□□□ -1.16
LST8YNL006W LDB19Q12502 818 aa7.82□□□□□ -1.16
LST8YNL006W FKS3Q04952 1785 aa7.82□□□□□ -1.16
LST8YNL006W CPS1P27614 576 aa7.81□□□□□ -1.16
LST8YNL006W URB1P34241 1764 aaKnown RBP7.8□□□□□ -1.16
LST8YNL006W MSB4Q12317 492 aa7.79□□□□□ -1.16
LST8YNL006W YLR419WQ06698 1435 aaKnown RBP7.78□□□□□ -1.16
LST8YNL006W GLN1P32288 370 aaKnown RBP7.78□□□□□ -1.16
LST8YNL006W YJL171CP46992 396 aa7.78□□□□□ -1.16
LST8YNL006W YMR1P47147 688 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
LST8YNL006W KIP3P53086 805 aaKnown RBP7.78□□□□□ -1.16
LST8YNL006W ENT1Q12518 454 aa7.78□□□□□ -1.16
LST8YNL006W SPE2P21182 396 aa7.77□□□□□ -1.17
LST8YNL006W ORC1P54784 914 aaPredicted RBP7.77□□□□□ -1.17
LST8YNL006W DBP1P24784 617 aaKnown RBP7.76□□□□□ -1.17
LST8YNL006W YOL036WQ08206 761 aa7.76□□□□□ -1.17
LST8YNL006W ENV9Q08651 330 aa7.76□□□□□ -1.17
LST8YNL006W ADE6P38972 1358 aaKnown RBP7.75□□□□□ -1.17
LST8YNL006W MLP1Q02455 1875 aaKnown RBP7.75□□□□□ -1.17
LST8YNL006W NAP1P25293 417 aaKnown RBP7.75□□□□□ -1.17
LST8YNL006W YRF1-3P0CX14 1859 aa7.75□□□□□ -1.17
LST8YNL006W YRF1-7P0CX15 1859 aa7.75□□□□□ -1.17
LST8YNL006W YRF1-6P53819 1859 aa7.75□□□□□ -1.17
LST8YNL006W PSK1P31374 1356 aa7.74□□□□□ -1.17
LST8YNL006W PRP45P28004 379 aaPredicted RBP7.74□□□□□ -1.17
LST8YNL006W RTG3P38165 486 aa7.74□□□□□ -1.17
LST8YNL006W STS1P38637 319 aa7.74□□□□□ -1.17
LST8YNL006W YML133CQ03099 1374 aa7.73□□□□□ -1.17
LST8YNL006W YLL067CQ07888 1374 aa7.73□□□□□ -1.17
LST8YNL006W YLL066CQ99208 1374 aa7.73□□□□□ -1.17
LST8YNL006W EAP1P36041 632 aaKnown RBP7.73□□□□□ -1.17
LST8YNL006W SET4P42948 560 aa7.73□□□□□ -1.17
LST8YNL006W VMA1P17255 1071 aaKnown RBP7.71□□□□□ -1.18
LST8YNL006W APC1P53886 1748 aa7.71□□□□□ -1.18
LST8YNL006W TRP5P00931 707 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms