RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C TAF8Q03750 510 aa8.74□□□□□ -1.01
SCS7YMR272C ENV9Q08651 330 aa8.74□□□□□ -1.01
SCS7YMR272C PRP45P28004 379 aaPredicted RBP8.73□□□□□ -1.01
SCS7YMR272C UBP1P25037 809 aa8.71□□□□□ -1.02
SCS7YMR272C CPS1P27614 576 aa8.71□□□□□ -1.02
SCS7YMR272C RCM1P53972 490 aa8.68□□□□□ -1.02
SCS7YMR272C TY3B-IQ7LHG5 1498 aaKnown RBP8.68□□□□□ -1.02
SCS7YMR272C YRF1-2P40105 1681 aa8.68□□□□□ -1.02
SCS7YMR272C PRP5P21372 849 aaPredicted RBP8.67□□□□□ -1.02
SCS7YMR272C EDE1P34216 1381 aa8.66□□□□□ -1.02
SCS7YMR272C RRP5Q05022 1729 aaKnown RBP8.66□□□□□ -1.02
SCS7YMR272C ENP1P38333 483 aaKnown RBP8.65□□□□□ -1.02
SCS7YMR272C SPE2P21182 396 aa8.64□□□□□ -1.03
SCS7YMR272C YJL181WP46987 611 aa8.64□□□□□ -1.03
SCS7YMR272C YEF3P16521 1044 aaKnown RBP8.62□□□□□ -1.03
SCS7YMR272C KIP3P53086 805 aaKnown RBP8.62□□□□□ -1.03
SCS7YMR272C LEU2P04173 364 aaPredicted RBP8.61□□□□□ -1.03
SCS7YMR272C MTR4P47047 1073 aaKnown RBP8.61□□□□□ -1.03
SCS7YMR272C TCB1Q12466 1186 aa8.61□□□□□ -1.03
SCS7YMR272C PSK1P31374 1356 aa8.61□□□□□ -1.03
SCS7YMR272C GTT3P39996 337 aa8.59□□□□□ -1.03
SCS7YMR272C CHZ1P40019 153 aaPredicted RBP8.59□□□□□ -1.03
SCS7YMR272C BUD31P25337 157 aaPredicted RBP8.58□□□□□ -1.04
SCS7YMR272C UGA2P38067 497 aa8.58□□□□□ -1.04
SCS7YMR272C LAM6Q08001 693 aa8.58□□□□□ -1.04
SCS7YMR272C ROM2P51862 1356 aaKnown RBP8.58□□□□□ -1.04
SCS7YMR272C PRP40P33203 583 aaKnown RBP8.57□□□□□ -1.04
SCS7YMR272C CSE4P36012 229 aa8.57□□□□□ -1.04
SCS7YMR272C IES2P40154 320 aa8.57□□□□□ -1.04
SCS7YMR272C PPH3P32345 308 aa8.56□□□□□ -1.04
SCS7YMR272C ADE6P38972 1358 aaKnown RBP8.55□□□□□ -1.04
SCS7YMR272C ALD2P47771 506 aa8.54□□□□□ -1.04
SCS7YMR272C RTF1P53064 558 aa8.54□□□□□ -1.04
SCS7YMR272C TY4B-HP0C2J7 1802 aa8.54□□□□□ -1.04
SCS7YMR272C TY4B-JP47024 1803 aa8.54□□□□□ -1.04
SCS7YMR272C MSB3P48566 633 aaPredicted RBP8.53□□□□□ -1.04
SCS7YMR272C PRP43P53131 767 aaKnown RBP8.53□□□□□ -1.04
SCS7YMR272C SLM3Q12093 417 aa8.53□□□□□ -1.04
SCS7YMR272C RSF2P46974 1380 aa8.52□□□□□ -1.05
SCS7YMR272C MEC3Q02574 474 aa8.52□□□□□ -1.05
SCS7YMR272C RPN11P43588 306 aaKnown RBP8.51□□□□□ -1.05
SCS7YMR272C RPS24AP0CX31 135 aaKnown RBP8.48□□□□□ -1.05
SCS7YMR272C RPS24BP0CX32 135 aaKnown RBP8.48□□□□□ -1.05
SCS7YMR272C YKL133CP36066 463 aa8.48□□□□□ -1.05
SCS7YMR272C ORC1P54784 914 aaPredicted RBP8.48□□□□□ -1.05
SCS7YMR272C SPT7P35177 1332 aa8.48□□□□□ -1.05
SCS7YMR272C URB1P34241 1764 aaKnown RBP8.48□□□□□ -1.05
SCS7YMR272C PDI1P17967 522 aaKnown RBP8.47□□□□□ -1.05
SCS7YMR272C DOT5P40553 215 aa8.47□□□□□ -1.05
SCS7YMR272C YBL086CP38177 466 aa8.46□□□□□ -1.06
SCS7YMR272C XKS1P42826 600 aa8.45□□□□□ -1.06
SCS7YMR272C MLP1Q02455 1875 aaKnown RBP8.45□□□□□ -1.06
SCS7YMR272C GRX4P32642 244 aa8.44□□□□□ -1.06
SCS7YMR272C YLR419WQ06698 1435 aaKnown RBP8.44□□□□□ -1.06
SCS7YMR272C DPS1P04802 557 aaKnown RBP8.42□□□□□ -1.06
SCS7YMR272C SSA2P10592 639 aaKnown RBP8.42□□□□□ -1.06
SCS7YMR272C FOX2Q02207 900 aaKnown RBP8.42□□□□□ -1.06
SCS7YMR272C ALD3P54114 506 aa8.4□□□□□ -1.06
SCS7YMR272C COBP00163 385 aa8.39□□□□□ -1.07
SCS7YMR272C ATG13Q06628 738 aa8.39□□□□□ -1.07
SCS7YMR272C FKS3Q04952 1785 aa8.39□□□□□ -1.07
SCS7YMR272C BDF1P35817 686 aa8.38□□□□□ -1.07
SCS7YMR272C FKH1P40466 484 aa8.38□□□□□ -1.07
SCS7YMR272C GAS4Q08271 471 aa8.38□□□□□ -1.07
SCS7YMR272C YRF1-3P0CX14 1859 aa8.37□□□□□ -1.07
SCS7YMR272C YRF1-7P0CX15 1859 aa8.37□□□□□ -1.07
SCS7YMR272C YRF1-6P53819 1859 aa8.37□□□□□ -1.07
SCS7YMR272C TAP42Q04372 366 aa8.37□□□□□ -1.07
SCS7YMR272C POL5P39985 1022 aaKnown RBP8.36□□□□□ -1.07
SCS7YMR272C LYS4P49367 693 aaPredicted RBP8.36□□□□□ -1.07
SCS7YMR272C MSB4Q12317 492 aa8.36□□□□□ -1.07
SCS7YMR272C NPR2P39923 615 aa8.35□□□□□ -1.07
SCS7YMR272C YRF1-4O13559 1382 aa8.35□□□□□ -1.07
SCS7YMR272C SSA1P10591 642 aaKnown RBP8.34□□□□□ -1.07
SCS7YMR272C APC1P53886 1748 aa8.34□□□□□ -1.07
SCS7YMR272C SEC3P33332 1336 aaKnown RBP8.33□□□□□ -1.08
SCS7YMR272C KAR2P16474 682 aaKnown RBP8.33□□□□□ -1.08
SCS7YMR272C RCR1P38212 213 aa8.33□□□□□ -1.08
SCS7YMR272C BUG1Q12191 341 aa8.33□□□□□ -1.08
SCS7YMR272C SIR4P11978 1358 aa8.33□□□□□ -1.08
SCS7YMR272C GRX1P25373 110 aaKnown RBP8.32□□□□□ -1.08
SCS7YMR272C YKR075CP36155 307 aa8.32□□□□□ -1.08
SCS7YMR272C RRT14P40470 206 aa8.32□□□□□ -1.08
SCS7YMR272C SAP155P43612 1002 aa8.32□□□□□ -1.08
SCS7YMR272C CTF4Q01454 927 aa8.32□□□□□ -1.08
SCS7YMR272C SNF2P22082 1703 aa8.32□□□□□ -1.08
SCS7YMR272C RTG3P38165 486 aa8.3□□□□□ -1.08
SCS7YMR272C FRK1Q03002 865 aaPredicted RBP8.3□□□□□ -1.08
SCS7YMR272C PDS5Q04264 1277 aa8.3□□□□□ -1.08
SCS7YMR272C UTP22P53254 1237 aaPredicted RBP8.29□□□□□ -1.08
SCS7YMR272C MHP1P43638 1398 aa8.29□□□□□ -1.08
SCS7YMR272C RAD4P14736 754 aa8.28□□□□□ -1.08
SCS7YMR272C RPG1P38249 964 aaKnown RBP8.28□□□□□ -1.08
SCS7YMR272C YBP2P53169 641 aa8.27□□□□□ -1.09
SCS7YMR272C PAP2P53632 584 aaKnown RBP8.27□□□□□ -1.09
SCS7YMR272C HPC2Q01448 625 aa8.27□□□□□ -1.09
SCS7YMR272C MDG1P53885 366 aa8.26□□□□□ -1.09
SCS7YMR272C RPO41P13433 1351 aaKnown RBP8.25□□□□□ -1.09
SCS7YMR272C YML133CQ03099 1374 aa8.25□□□□□ -1.09
SCS7YMR272C YLL067CQ07888 1374 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms