RNA–Protein interactions for RNA: YLR383W

SMC6, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC6, Length 3,345 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC6YLR383W RTT106P40161 455 aa3.61□□□□□ -1.83
SMC6YLR383W DCD1P06773 312 aa3.6□□□□□ -1.83
SMC6YLR383W RSM7P47150 247 aa3.6□□□□□ -1.83
SMC6YLR383W SNF2P22082 1703 aa3.6□□□□□ -1.83
SMC6YLR383W CDC27P38042 758 aa3.59□□□□□ -1.83
SMC6YLR383W HOP09932 586 aa3.59□□□□□ -1.83
SMC6YLR383W YAP3P38749 330 aa3.58□□□□□ -1.84
SMC6YLR383W YFR006WP43590 535 aa3.58□□□□□ -1.84
SMC6YLR383W RAM2P29703 316 aa3.57□□□□□ -1.84
SMC6YLR383W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84 RIP-Chip
SMC6YLR383W YIL177CP40434 1758 aa3.57□□□□□ -1.84
SMC6YLR383W YJL225CP40889 1758 aa3.57□□□□□ -1.84
SMC6YLR383W YPR148CQ06523 435 aa3.56□□□□□ -1.84
SMC6YLR383W RCR1P38212 213 aa3.56□□□□□ -1.84
SMC6YLR383W IPL1P38991 367 aa3.56□□□□□ -1.84
SMC6YLR383W BCH2P36122 765 aa3.55□□□□□ -1.84
SMC6YLR383W FKS3Q04952 1785 aa3.55□□□□□ -1.84
SMC6YLR383W PSK1P31374 1356 aa3.55□□□□□ -1.84
SMC6YLR383W AI2P03876 854 aa3.54□□□□□ -1.84
SMC6YLR383W YIL055CP40523 627 aaKnown RBP3.54□□□□□ -1.84
SMC6YLR383W YRF1-3P0CX14 1859 aa3.54□□□□□ -1.84
SMC6YLR383W YRF1-7P0CX15 1859 aa3.54□□□□□ -1.84
SMC6YLR383W YRF1-6P53819 1859 aa3.54□□□□□ -1.84
SMC6YLR383W MLP1Q02455 1875 aaKnown RBP3.54□□□□□ -1.84
SMC6YLR383W ADE6P38972 1358 aaKnown RBP3.53□□□□□ -1.84
SMC6YLR383W URB1P34241 1764 aaKnown RBP3.53□□□□□ -1.84
SMC6YLR383W YMR196WQ04336 1088 aa3.52□□□□□ -1.85
SMC6YLR383W SCT1P32784 759 aa3.52□□□□□ -1.85
SMC6YLR383W PRP43P53131 767 aaKnown RBP3.52□□□□□ -1.85
SMC6YLR383W YLL066CQ99208 1374 aa3.52□□□□□ -1.85
SMC6YLR383W YLR419WQ06698 1435 aaKnown RBP3.52□□□□□ -1.85
SMC6YLR383W MAK10Q02197 733 aa3.51□□□□□ -1.85
SMC6YLR383W UTP10P42945 1769 aaKnown RBP3.51□□□□□ -1.85
SMC6YLR383W DMA2P53924 522 aa3.5□□□□□ -1.85
SMC6YLR383W BUD21Q08492 214 aaPredicted RBP3.48□□□□□ -1.85
SMC6YLR383W SET1P38827 1080 aaKnown RBP3.48□□□□□ -1.85
SMC6YLR383W RIM15P43565 1770 aa3.48□□□□□ -1.85
SMC6YLR383W BDF1P35817 686 aa3.47□□□□□ -1.85
SMC6YLR383W EPS1P40557 701 aa3.47□□□□□ -1.85
SMC6YLR383W RPN1P38764 993 aaKnown RBP3.46□□□□□ -1.86
SMC6YLR383W YRF1-4O13559 1382 aa3.46□□□□□ -1.86
SMC6YLR383W YML133CQ03099 1374 aa3.46□□□□□ -1.86
SMC6YLR383W YLL067CQ07888 1374 aa3.46□□□□□ -1.86
SMC6YLR383W DSF2P38213 736 aa3.46□□□□□ -1.86
SMC6YLR383W VPS29P38759 282 aa3.45□□□□□ -1.86
SMC6YLR383W MRPL32P25348 183 aa3.44□□□□□ -1.86
SMC6YLR383W MAK11P20484 414 aaKnown RBP3.44□□□□□ -1.86
SMC6YLR383W ALD4P46367 519 aaKnown RBP3.44□□□□□ -1.86
SMC6YLR383W MRM1P25270 412 aa3.43□□□□□ -1.86
SMC6YLR383W MHP1P43638 1398 aa3.43□□□□□ -1.86
SMC6YLR383W CKB1P43639 278 aa3.42□□□□□ -1.86
SMC6YLR383W SPT7P35177 1332 aa3.42□□□□□ -1.86
SMC6YLR383W IFH1P39520 1085 aa3.42□□□□□ -1.86
SMC6YLR383W ESL2P36168 1195 aa3.41□□□□□ -1.86
SMC6YLR383W NUP42P49686 430 aaKnown RBP3.41□□□□□ -1.86
SMC6YLR383W SIR4P11978 1358 aa3.41□□□□□ -1.86
SMC6YLR383W VPS70P47161 811 aa3.41□□□□□ -1.86
SMC6YLR383W LYS2P07702 1392 aa3.4□□□□□ -1.87
SMC6YLR383W TYS1P36421 394 aaKnown RBP3.4□□□□□ -1.87
SMC6YLR383W EDS1P38073 919 aa3.4□□□□□ -1.87
SMC6YLR383W FIG2P25653 1609 aa3.39□□□□□ -1.87
SMC6YLR383W RTG3P38165 486 aa3.39□□□□□ -1.87
SMC6YLR383W STS1P38637 319 aa3.39□□□□□ -1.87
SMC6YLR383W YFR016CP43597 1233 aaKnown RBP3.39□□□□□ -1.87
SMC6YLR383W BBC1P47068 1157 aa3.39□□□□□ -1.87
SMC6YLR383W YNR029CP53729 429 aaKnown RBP3.38□□□□□ -1.87
SMC6YLR383W COQ8P27697 501 aa3.37□□□□□ -1.87
SMC6YLR383W PBS2P08018 668 aa3.37□□□□□ -1.87
SMC6YLR383W RAD9P14737 1309 aa3.37□□□□□ -1.87
SMC6YLR383W DIT2P21595 489 aa3.36□□□□□ -1.87
SMC6YLR383W TAP42Q04372 366 aa3.36□□□□□ -1.87
SMC6YLR383W ROM2P51862 1356 aaKnown RBP3.36□□□□□ -1.87
SMC6YLR383W PAF1P38351 445 aa3.36□□□□□ -1.87
SMC6YLR383W YNR021WP53723 404 aaKnown RBP3.36□□□□□ -1.87
SMC6YLR383W SEC3P33332 1336 aaKnown RBP3.36□□□□□ -1.87
SMC6YLR383W CPS1P27614 576 aa3.36□□□□□ -1.87
SMC6YLR383W RLF2Q12495 606 aa3.36□□□□□ -1.87
SMC6YLR383W FKH1P40466 484 aa3.35□□□□□ -1.87
SMC6YLR383W YDR090CQ03193 310 aa3.35□□□□□ -1.87
SMC6YLR383W NOP53Q12080 455 aaKnown RBP3.35□□□□□ -1.87
SMC6YLR383W KIN1P13185 1064 aa3.35□□□□□ -1.87
SMC6YLR383W MAP2P38174 421 aaKnown RBP3.35□□□□□ -1.87
SMC6YLR383W AIM7Q12156 149 aa3.35□□□□□ -1.87
SMC6YLR383W RSF2P46974 1380 aa3.35□□□□□ -1.87
SMC6YLR383W GUA1P38625 525 aaKnown RBP3.34□□□□□ -1.87
SMC6YLR383W AUS1Q08409 1394 aa3.34□□□□□ -1.87
SMC6YLR383W SPB4P25808 606 aaPredicted RBP3.34□□□□□ -1.88
SMC6YLR383W YGL015CP33199 130 aa3.34□□□□□ -1.88
SMC6YLR383W SCY1P53009 804 aa3.34□□□□□ -1.88
SMC6YLR383W GLC3P32775 704 aa3.32□□□□□ -1.88
SMC6YLR383W RPO41P13433 1351 aaKnown RBP3.32□□□□□ -1.88
SMC6YLR383W NST1P53935 1240 aa3.32□□□□□ -1.88
SMC6YLR383W UBP10P53874 792 aaPredicted RBP3.32□□□□□ -1.88
SMC6YLR383W COX6P00427 148 aa3.31□□□□□ -1.88
SMC6YLR383W RPP0P05317 312 aaKnown RBP3.31□□□□□ -1.88
SMC6YLR383W UBP14P38237 781 aaKnown RBP3.31□□□□□ -1.88
SMC6YLR383W CTF4Q01454 927 aa3.31□□□□□ -1.88
SMC6YLR383W MTR4P47047 1073 aaKnown RBP3.31□□□□□ -1.88
SMC6YLR383W HKR1P41809 1802 aa3.31□□□□□ -1.88
SMC6YLR383W KRE5P22023 1365 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms