RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W TY1A-DR4O74302 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-HP0C2I4 478 aaKnown RBP7.97□□□□□ -1.13
SMD2YLR275W TY1A-AP0CX57 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-PR1P0CX58 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-ORP0CX59 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-PR2P0CX60 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-DR5P0CX65 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-ER2P0CX66 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-GR3P0CX67 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-LR1P0CX68 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-MR2P0CX69 440 aa7.97□□□□□ -1.13
SMD2YLR275W SIT4P20604 311 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-JR2P47099 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-DR1Q03856 440 aa7.97□□□□□ -1.13
SMD2YLR275W YMR196WQ04336 1088 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-ML1Q04706 440 aaKnown RBP7.97□□□□□ -1.13
SMD2YLR275W TY1A-BRQ12217 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-NL2Q12470 440 aa7.97□□□□□ -1.13
SMD2YLR275W TY1A-GR2Q12485 440 aa7.97□□□□□ -1.13
SMD2YLR275W SEC2P17065 759 aa7.96□□□□□ -1.14
SMD2YLR275W RTF1P53064 558 aa7.96□□□□□ -1.14
SMD2YLR275W FPK1P53739 893 aa7.95□□□□□ -1.14
SMD2YLR275W ERF2Q06551 359 aa7.95□□□□□ -1.14
SMD2YLR275W KIN1P13185 1064 aa7.94□□□□□ -1.14
SMD2YLR275W YNL115CP53925 644 aa7.94□□□□□ -1.14
SMD2YLR275W HST2P53686 357 aa7.91□□□□□ -1.14
SMD2YLR275W MRF1P30775 413 aaPredicted RBP7.9□□□□□ -1.14
SMD2YLR275W SPT16P32558 1035 aaKnown RBP7.89□□□□□ -1.15
SMD2YLR275W RRN7P40992 514 aa7.89□□□□□ -1.15
SMD2YLR275W SLY41P22215 453 aa7.88□□□□□ -1.15
SMD2YLR275W PAT1P25644 796 aaKnown RBP7.88□□□□□ -1.15
SMD2YLR275W SDH2P21801 266 aa7.87□□□□□ -1.15
SMD2YLR275W GLN1P32288 370 aaKnown RBP7.87□□□□□ -1.15
SMD2YLR275W MMP1Q12372 583 aa7.87□□□□□ -1.15
SMD2YLR275W DPS1P04802 557 aaKnown RBP7.86□□□□□ -1.15
SMD2YLR275W SCJ1P25303 377 aa7.86□□□□□ -1.15
SMD2YLR275W LEO1P38439 464 aa7.85□□□□□ -1.15
SMD2YLR275W CSN12P47130 423 aa7.85□□□□□ -1.15
SMD2YLR275W TUB4P53378 473 aa7.85□□□□□ -1.15
SMD2YLR275W AGE1Q04412 482 aa7.85□□□□□ -1.15
SMD2YLR275W TYW1Q08960 810 aaKnown RBP7.84□□□□□ -1.15
SMD2YLR275W YEL077CQ3E7X8 1277 aa7.84□□□□□ -1.15
SMD2YLR275W ERG12P07277 443 aa7.83□□□□□ -1.16
SMD2YLR275W PAC1P39946 494 aaKnown RBP7.83□□□□□ -1.16
SMD2YLR275W ESS1P22696 170 aa7.82□□□□□ -1.16
SMD2YLR275W AMS1P22855 1083 aa7.82□□□□□ -1.16
SMD2YLR275W KTR1P27810 393 aaKnown RBP7.82□□□□□ -1.16
SMD2YLR275W RAS1P01119 309 aa7.79□□□□□ -1.16
SMD2YLR275W SSA2P10592 639 aaKnown RBP7.79□□□□□ -1.16
SMD2YLR275W PUS6P53294 404 aa7.79□□□□□ -1.16
SMD2YLR275W TRM1P15565 570 aaKnown RBP7.78□□□□□ -1.16
SMD2YLR275W YJU3P28321 313 aa7.78□□□□□ -1.16
SMD2YLR275W GUA1P38625 525 aaKnown RBP7.78□□□□□ -1.16
SMD2YLR275W TBF1Q02457 562 aa7.78□□□□□ -1.16
SMD2YLR275W PKH3Q03306 898 aaPredicted RBP7.78□□□□□ -1.16
SMD2YLR275W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
SMD2YLR275W CST6P40535 587 aa7.75□□□□□ -1.17
SMD2YLR275W LAM6Q08001 693 aa7.75□□□□□ -1.17
SMD2YLR275W KXD1P53158 218 aa7.74□□□□□ -1.17
SMD2YLR275W YDL206WQ12424 762 aa7.74□□□□□ -1.17
SMD2YLR275W MOD5P07884 428 aa7.73□□□□□ -1.17
SMD2YLR275W BDP1P46678 594 aa7.73□□□□□ -1.17
SMD2YLR275W FRK1Q03002 865 aaPredicted RBP7.73□□□□□ -1.17
SMD2YLR275W RPA14P50106 137 aa7.72□□□□□ -1.17
SMD2YLR275W PDC1P06169 563 aaKnown RBP7.71□□□□□ -1.18
SMD2YLR275W ARG8P18544 423 aa7.71□□□□□ -1.18
SMD2YLR275W RSC30P38781 883 aa7.71□□□□□ -1.18
SMD2YLR275W HPC2Q01448 625 aa7.71□□□□□ -1.18
SMD2YLR275W ALR1Q08269 859 aa7.71□□□□□ -1.18
SMD2YLR275W RAD59Q12223 238 aa7.71□□□□□ -1.18
SMD2YLR275W HXT10P43581 546 aa7.7□□□□□ -1.18
SMD2YLR275W TPD3P31383 635 aa7.69□□□□□ -1.18
SMD2YLR275W YPR097WQ06839 1073 aa7.69□□□□□ -1.18
SMD2YLR275W RRD1P40454 393 aaKnown RBP7.67□□□□□ -1.18
SMD2YLR275W BRL1P38770 471 aa7.66□□□□□ -1.18
SMD2YLR275W TFB3Q03290 321 aa7.64□□□□□ -1.19
SMD2YLR275W SRC1Q03707 834 aa7.64□□□□□ -1.19
SMD2YLR275W PUS5Q06244 254 aa7.64□□□□□ -1.19
SMD2YLR275W CLA4P48562 842 aa7.63□□□□□ -1.19
SMD2YLR275W HED1Q03937 162 aa7.62□□□□□ -1.19
SMD2YLR275W AIR1P40507 360 aaKnown RBP7.59□□□□□ -1.19
SMD2YLR275W MAK16P10962 306 aaPredicted RBP7.58□□□□□ -1.2
SMD2YLR275W TRK1P12685 1235 aa7.58□□□□□ -1.2
SMD2YLR275W HGH1P48362 394 aaKnown RBP7.58□□□□□ -1.2
SMD2YLR275W SYH1Q02875 849 aaKnown RBP7.58□□□□□ -1.2
SMD2YLR275W PKC1P24583 1151 aa7.57□□□□□ -1.2
SMD2YLR275W CSE4P36012 229 aa7.57□□□□□ -1.2
SMD2YLR275W YBL036CP38197 257 aa7.57□□□□□ -1.2
SMD2YLR275W CDC4P07834 779 aa7.56□□□□□ -1.2
SMD2YLR275W KIP2P28743 706 aa7.56□□□□□ -1.2
SMD2YLR275W VAC17P25591 423 aa7.55□□□□□ -1.2
SMD2YLR275W IXR1P33417 597 aa7.54□□□□□ -1.2
SMD2YLR275W FIG4P42837 879 aa7.53□□□□□ -1.2
SMD2YLR275W NAF1P53919 492 aaKnown RBP7.52□□□□□ -1.21
SMD2YLR275W MET32Q12041 191 aa7.52□□□□□ -1.21
SMD2YLR275W TEC1P18412 486 aa7.51□□□□□ -1.21
SMD2YLR275W SPT5P27692 1063 aaKnown RBP7.5□□□□□ -1.21
SMD2YLR275W DMA2P53924 522 aa7.5□□□□□ -1.21
SMD2YLR275W BIO2P32451 375 aa7.48□□□□□ -1.21
SMD2YLR275W AFT1P22149 690 aa7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms