RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W TY4B-HP0C2J7 1802 aa8.16□□□□□ -1.1
SSP120YLR250W PRP45P28004 379 aaPredicted RBP8.16□□□□□ -1.1
SSP120YLR250W TY4B-JP47024 1803 aa8.16□□□□□ -1.1
SSP120YLR250W RCM1P53972 490 aa8.14□□□□□ -1.11
SSP120YLR250W TAF5P38129 798 aa8.13□□□□□ -1.11
SSP120YLR250W CPS1P27614 576 aa8.12□□□□□ -1.11
SSP120YLR250W TAF8Q03750 510 aa8.12□□□□□ -1.11
SSP120YLR250W PPH3P32345 308 aa8.11□□□□□ -1.11
SSP120YLR250W NOP7P53261 605 aaKnown RBP8.09□□□□□ -1.11
SSP120YLR250W URB1P34241 1764 aaKnown RBP8.09□□□□□ -1.11
SSP120YLR250W PRP5P21372 849 aaPredicted RBP8.08□□□□□ -1.12
SSP120YLR250W RPN11P43588 306 aaKnown RBP8.07□□□□□ -1.12
SSP120YLR250W LEU3P08638 886 aa8.06□□□□□ -1.12
SSP120YLR250W MSB3P48566 633 aaPredicted RBP8.06□□□□□ -1.12
SSP120YLR250W DOT5P40553 215 aa8.05□□□□□ -1.12
SSP120YLR250W FKS3Q04952 1785 aa8.05□□□□□ -1.12
SSP120YLR250W NAP1P25293 417 aaKnown RBP8.04□□□□□ -1.12
SSP120YLR250W PSK1P31374 1356 aa8.04□□□□□ -1.12
SSP120YLR250W YBL086CP38177 466 aa8.03□□□□□ -1.12
SSP120YLR250W ESL2P36168 1195 aa8.02□□□□□ -1.13
SSP120YLR250W ADE6P38972 1358 aaKnown RBP8.01□□□□□ -1.13
SSP120YLR250W UBP1P25037 809 aa8.01□□□□□ -1.13
SSP120YLR250W IES2P40154 320 aa8.01□□□□□ -1.13
SSP120YLR250W LYS4P49367 693 aaPredicted RBP8.01□□□□□ -1.13
SSP120YLR250W NPR2P39923 615 aa8□□□□□ -1.13
SSP120YLR250W FOX2Q02207 900 aaKnown RBP8□□□□□ -1.13
SSP120YLR250W YRF1-3P0CX14 1859 aa8□□□□□ -1.13
SSP120YLR250W YRF1-7P0CX15 1859 aa8□□□□□ -1.13
SSP120YLR250W YRF1-6P53819 1859 aa8□□□□□ -1.13
SSP120YLR250W YIL177CP40434 1758 aa7.98□□□□□ -1.13
SSP120YLR250W YJL225CP40889 1758 aa7.98□□□□□ -1.13
SSP120YLR250W TCB1Q12466 1186 aa7.96□□□□□ -1.14
SSP120YLR250W RSF2P46974 1380 aa7.96□□□□□ -1.14
SSP120YLR250W SPE2P21182 396 aa7.95□□□□□ -1.14
SSP120YLR250W CTH1P47976 325 aa7.94□□□□□ -1.14
SSP120YLR250W SLM3Q12093 417 aa7.94□□□□□ -1.14
SSP120YLR250W RPS24AP0CX31 135 aaKnown RBP7.93□□□□□ -1.14
SSP120YLR250W RPS24BP0CX32 135 aaKnown RBP7.93□□□□□ -1.14
SSP120YLR250W CSE4P36012 229 aa7.93□□□□□ -1.14
SSP120YLR250W KIP3P53086 805 aaKnown RBP7.93□□□□□ -1.14
SSP120YLR250W ROM2P51862 1356 aaKnown RBP7.93□□□□□ -1.14
SSP120YLR250W SSA2P10592 639 aaKnown RBP7.92□□□□□ -1.14
SSP120YLR250W COBP00163 385 aa7.91□□□□□ -1.14
SSP120YLR250W UGA2P38067 497 aa7.91□□□□□ -1.14
SSP120YLR250W YJL181WP46987 611 aa7.91□□□□□ -1.14
SSP120YLR250W YKL133CP36066 463 aa7.9□□□□□ -1.14
SSP120YLR250W YKR075CP36155 307 aa7.9□□□□□ -1.14
SSP120YLR250W ORC1P54784 914 aaPredicted RBP7.9□□□□□ -1.14
SSP120YLR250W APC1P53886 1748 aa7.89□□□□□ -1.15
SSP120YLR250W YRF1-4O13559 1382 aa7.89□□□□□ -1.15
SSP120YLR250W SSA1P10591 642 aaKnown RBP7.89□□□□□ -1.15
SSP120YLR250W XKS1P42826 600 aa7.89□□□□□ -1.15
SSP120YLR250W PRP43P53131 767 aaKnown RBP7.89□□□□□ -1.15
SSP120YLR250W LEU2P04173 364 aaPredicted RBP7.88□□□□□ -1.15
SSP120YLR250W GTT3P39996 337 aa7.88□□□□□ -1.15
SSP120YLR250W ALD2P47771 506 aa7.88□□□□□ -1.15
SSP120YLR250W CHZ1P40019 153 aaPredicted RBP7.87□□□□□ -1.15
SSP120YLR250W LAM6Q08001 693 aa7.87□□□□□ -1.15
SSP120YLR250W YML133CQ03099 1374 aa7.86□□□□□ -1.15
SSP120YLR250W YLL067CQ07888 1374 aa7.86□□□□□ -1.15
SSP120YLR250W YLL066CQ99208 1374 aa7.86□□□□□ -1.15
SSP120YLR250W PRP40P33203 583 aaKnown RBP7.86□□□□□ -1.15
SSP120YLR250W EDE1P34216 1381 aa7.85□□□□□ -1.15
SSP120YLR250W ENP1P38333 483 aaKnown RBP7.85□□□□□ -1.15
SSP120YLR250W MTR4P47047 1073 aaKnown RBP7.85□□□□□ -1.15
SSP120YLR250W YLR419WQ06698 1435 aaKnown RBP7.85□□□□□ -1.15
SSP120YLR250W YEF3P16521 1044 aaKnown RBP7.84□□□□□ -1.15
SSP120YLR250W FRK1Q03002 865 aaPredicted RBP7.83□□□□□ -1.16
SSP120YLR250W DIP2Q12220 943 aaPredicted RBP7.8□□□□□ -1.16
SSP120YLR250W SNF2P22082 1703 aa7.8□□□□□ -1.16
SSP120YLR250W ADE16P54113 591 aaKnown RBP7.79□□□□□ -1.16
SSP120YLR250W GAS4Q08271 471 aa7.79□□□□□ -1.16
SSP120YLR250W DPS1P04802 557 aaKnown RBP7.78□□□□□ -1.16
SSP120YLR250W RCR1P38212 213 aa7.78□□□□□ -1.16
SSP120YLR250W RIM15P43565 1770 aa7.78□□□□□ -1.16
SSP120YLR250W RPG1P38249 964 aaKnown RBP7.76□□□□□ -1.17
SSP120YLR250W EAF6P47128 113 aa7.75□□□□□ -1.17
SSP120YLR250W RPO41P13433 1351 aaKnown RBP7.74□□□□□ -1.17
SSP120YLR250W SIR4P11978 1358 aa7.73□□□□□ -1.17
SSP120YLR250W BDF1P35817 686 aa7.73□□□□□ -1.17
SSP120YLR250W ISW2Q08773 1120 aa7.73□□□□□ -1.17
SSP120YLR250W ALD3P54114 506 aa7.72□□□□□ -1.17
SSP120YLR250W MEC3Q02574 474 aa7.72□□□□□ -1.17
SSP120YLR250W MSB4Q12317 492 aa7.72□□□□□ -1.17
SSP120YLR250W AUS1Q08409 1394 aa7.71□□□□□ -1.17
SSP120YLR250W RRD1P40454 393 aaKnown RBP7.71□□□□□ -1.18
SSP120YLR250W FKH1P40466 484 aa7.71□□□□□ -1.18
SSP120YLR250W MLP1Q02455 1875 aaKnown RBP7.7□□□□□ -1.18
SSP120YLR250W RTG3P38165 486 aa7.7□□□□□ -1.18
SSP120YLR250W SPT7P35177 1332 aa7.7□□□□□ -1.18
SSP120YLR250W ATG13Q06628 738 aa7.69□□□□□ -1.18
SSP120YLR250W PDI1P17967 522 aaKnown RBP7.68□□□□□ -1.18
SSP120YLR250W TOS1P38288 455 aa7.68□□□□□ -1.18
SSP120YLR250W PRY3P47033 881 aa7.68□□□□□ -1.18
SSP120YLR250W HIM1Q06674 414 aa7.68□□□□□ -1.18
SSP120YLR250W GRE2Q12068 342 aaKnown RBP7.68□□□□□ -1.18
SSP120YLR250W RTF1P53064 558 aa7.67□□□□□ -1.18
SSP120YLR250W INP54Q08227 384 aaKnown RBP7.67□□□□□ -1.18
SSP120YLR250W BUG1Q12191 341 aa7.67□□□□□ -1.18
SSP120YLR250W OSM1P21375 501 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms