RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C TY1A-HP0C2I4 478 aaKnown RBP6.74□□□□□ -1.33
SRP40YKR092C TY1A-AP0CX57 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-PR1P0CX58 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-ORP0CX59 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-PR2P0CX60 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-DR5P0CX65 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-ER2P0CX66 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-GR3P0CX67 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-LR1P0CX68 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-MR2P0CX69 440 aa6.74□□□□□ -1.33
SRP40YKR092C GCD11P32481 527 aaKnown RBP6.74□□□□□ -1.33
SRP40YKR092C TY1A-JR2P47099 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-DR1Q03856 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-ML1Q04706 440 aaKnown RBP6.74□□□□□ -1.33
SRP40YKR092C TY1A-BRQ12217 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-NL2Q12470 440 aa6.74□□□□□ -1.33
SRP40YKR092C TY1A-GR2Q12485 440 aa6.74□□□□□ -1.33
SRP40YKR092C SEC2P17065 759 aa6.73□□□□□ -1.33
SRP40YKR092C GLC3P32775 704 aa6.72□□□□□ -1.33
SRP40YKR092C TRK1P12685 1235 aa6.71□□□□□ -1.34
SRP40YKR092C ERG12P07277 443 aa6.7□□□□□ -1.34
SRP40YKR092C ATF2P53296 535 aa6.7□□□□□ -1.34
SRP40YKR092C AIM7Q12156 149 aa6.68□□□□□ -1.34
SRP40YKR092C KIN1P13185 1064 aa6.67□□□□□ -1.34
SRP40YKR092C PSE1P32337 1089 aaKnown RBP6.67□□□□□ -1.34
SRP40YKR092C SPT16P32558 1035 aaKnown RBP6.67□□□□□ -1.34
SRP40YKR092C CST6P40535 587 aa6.67□□□□□ -1.34
SRP40YKR092C KEX2P13134 814 aa6.65□□□□□ -1.34
SRP40YKR092C RRN7P40992 514 aa6.65□□□□□ -1.34
SRP40YKR092C ERF2Q06551 359 aa6.65□□□□□ -1.34
SRP40YKR092C CLA4P48562 842 aa6.63□□□□□ -1.35
SRP40YKR092C AIR1P40507 360 aaKnown RBP6.62□□□□□ -1.35
SRP40YKR092C FRK1Q03002 865 aaPredicted RBP6.62□□□□□ -1.35
SRP40YKR092C LAM6Q08001 693 aa6.62□□□□□ -1.35
SRP40YKR092C PAT1P25644 796 aaKnown RBP6.6□□□□□ -1.35
SRP40YKR092C TEA1P47988 759 aa6.6□□□□□ -1.35
SRP40YKR092C BDP1P46678 594 aa6.59□□□□□ -1.35
SRP40YKR092C CLB5P30283 435 aa6.58□□□□□ -1.36
SRP40YKR092C PAC1P39946 494 aaKnown RBP6.56□□□□□ -1.36
SRP40YKR092C DMA2P53924 522 aa6.56□□□□□ -1.36
SRP40YKR092C AGE1Q04412 482 aa6.54□□□□□ -1.36
SRP40YKR092C GUA1P38625 525 aaKnown RBP6.53□□□□□ -1.36
SRP40YKR092C TUB4P53378 473 aa6.53□□□□□ -1.36
SRP40YKR092C BRE2P43132 505 aa6.52□□□□□ -1.37
SRP40YKR092C RGA1P39083 1007 aa6.51□□□□□ -1.37
SRP40YKR092C CSN12P47130 423 aa6.51□□□□□ -1.37
SRP40YKR092C RTF1P53064 558 aa6.51□□□□□ -1.37
SRP40YKR092C YNL115CP53925 644 aa6.51□□□□□ -1.37
SRP40YKR092C NIS1P53939 407 aa6.51□□□□□ -1.37
SRP40YKR092C TAF7Q05021 590 aa6.51□□□□□ -1.37
SRP40YKR092C CDC4P07834 779 aa6.5□□□□□ -1.37
SRP40YKR092C SIT4P20604 311 aa6.5□□□□□ -1.37
SRP40YKR092C HED1Q03937 162 aa6.5□□□□□ -1.37
SRP40YKR092C MOD5P07884 428 aa6.49□□□□□ -1.37
SRP40YKR092C FPK1P53739 893 aa6.48□□□□□ -1.37
SRP40YKR092C GCR2Q01722 534 aa6.48□□□□□ -1.37
SRP40YKR092C YMR196WQ04336 1088 aa6.48□□□□□ -1.37
SRP40YKR092C SSA2P10592 639 aaKnown RBP6.47□□□□□ -1.37
SRP40YKR092C HGH1P48362 394 aaKnown RBP6.47□□□□□ -1.37
SRP40YKR092C HPC2Q01448 625 aa6.46□□□□□ -1.38
SRP40YKR092C PUS5Q06244 254 aa6.46□□□□□ -1.38
SRP40YKR092C TYW1Q08960 810 aaKnown RBP6.46□□□□□ -1.38
SRP40YKR092C GLN1P32288 370 aaKnown RBP6.44□□□□□ -1.38
SRP40YKR092C HST2P53686 357 aa6.44□□□□□ -1.38
SRP40YKR092C KTR1P27810 393 aaKnown RBP6.43□□□□□ -1.38
SRP40YKR092C RGA2Q06407 1009 aa6.43□□□□□ -1.38
SRP40YKR092C MET32Q12041 191 aa6.43□□□□□ -1.38
SRP40YKR092C MMP1Q12372 583 aa6.43□□□□□ -1.38
SRP40YKR092C SLY41P22215 453 aa6.42□□□□□ -1.38
SRP40YKR092C SCJ1P25303 377 aa6.42□□□□□ -1.38
SRP40YKR092C GAR1P28007 205 aaKnown RBP6.42□□□□□ -1.38
SRP40YKR092C BRL1P38770 471 aa6.41□□□□□ -1.38
SRP40YKR092C KXD1P53158 218 aa6.41□□□□□ -1.38
SRP40YKR092C TFB3Q03290 321 aa6.41□□□□□ -1.38
SRP40YKR092C ASH1P34233 588 aa6.4□□□□□ -1.38
SRP40YKR092C ESS1P22696 170 aa6.39□□□□□ -1.39
SRP40YKR092C PDC1P06169 563 aaKnown RBP6.38□□□□□ -1.39
SRP40YKR092C HXT10P43581 546 aa6.38□□□□□ -1.39
SRP40YKR092C YPL062WQ02781 134 aa6.38□□□□□ -1.39
SRP40YKR092C PKH3Q03306 898 aaPredicted RBP6.38□□□□□ -1.39
SRP40YKR092C AFT1P22149 690 aa6.37□□□□□ -1.39
SRP40YKR092C TPD3P31383 635 aa6.37□□□□□ -1.39
SRP40YKR092C MET22P32179 357 aa6.37□□□□□ -1.39
SRP40YKR092C RRD1P40454 393 aaKnown RBP6.37□□□□□ -1.39
SRP40YKR092C PKC1P24583 1151 aa6.36□□□□□ -1.39
SRP40YKR092C GBP2P25555 427 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SRP40YKR092C HST3P53687 447 aa6.36□□□□□ -1.39
SRP40YKR092C YJU3P28321 313 aa6.35□□□□□ -1.39
SRP40YKR092C PUS6P53294 404 aa6.35□□□□□ -1.39
SRP40YKR092C TBF1Q02457 562 aa6.35□□□□□ -1.39
SRP40YKR092C YDL206WQ12424 762 aa6.34□□□□□ -1.39
SRP40YKR092C ARG8P18544 423 aa6.33□□□□□ -1.4
SRP40YKR092C SYH1Q02875 849 aaKnown RBP6.33□□□□□ -1.4
SRP40YKR092C ENV9Q08651 330 aa6.33□□□□□ -1.4
SRP40YKR092C RAD59Q12223 238 aa6.33□□□□□ -1.4
SRP40YKR092C TRM1P15565 570 aaKnown RBP6.32□□□□□ -1.4
SRP40YKR092C RPA14P50106 137 aa6.32□□□□□ -1.4
SRP40YKR092C ALR1Q08269 859 aa6.32□□□□□ -1.4
SRP40YKR092C YJL007CP47080 104 aa6.31□□□□□ -1.4
SRP40YKR092C YDR444WQ04093 687 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms