RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C RTG3P38165 486 aa10.04□□□□□ -0.8
SNP1YIL061C YML133CQ03099 1374 aa10.02□□□□□ -0.8
SNP1YIL061C YLL067CQ07888 1374 aa10.02□□□□□ -0.8
SNP1YIL061C YLL066CQ99208 1374 aa10.02□□□□□ -0.8
SNP1YIL061C RIA1P53893 1110 aa10.02□□□□□ -0.81
SNP1YIL061C PSK1P31374 1356 aa10.01□□□□□ -0.81
SNP1YIL061C IOC4Q04213 475 aa10□□□□□ -0.81
SNP1YIL061C MLP1Q02455 1875 aaKnown RBP10□□□□□ -0.81
SNP1YIL061C PRI1P10363 409 aa9.99□□□□□ -0.81
SNP1YIL061C YNR029CP53729 429 aaKnown RBP9.97□□□□□ -0.81
SNP1YIL061C RCM1P53972 490 aa9.97□□□□□ -0.81
SNP1YIL061C PPH3P32345 308 aa9.96□□□□□ -0.82
SNP1YIL061C NOP2P40991 618 aaKnown RBP9.96□□□□□ -0.82
SNP1YIL061C AAD16Q02895 342 aa9.96□□□□□ -0.82
SNP1YIL061C TY1B-NL2Q99337 1749 aaKnown RBP9.96□□□□□ -0.82
SNP1YIL061C YEF3P16521 1044 aaKnown RBP9.95□□□□□ -0.82
SNP1YIL061C CPS1P27614 576 aa9.93□□□□□ -0.82
SNP1YIL061C RPP0P05317 312 aaKnown RBP9.91□□□□□ -0.82
SNP1YIL061C TRK1P12685 1235 aa9.91□□□□□ -0.82
SNP1YIL061C LEU2P04173 364 aaPredicted RBP9.88□□□□□ -0.83
SNP1YIL061C YFR006WP43590 535 aa9.88□□□□□ -0.83
SNP1YIL061C YMR196WQ04336 1088 aa9.88□□□□□ -0.83
SNP1YIL061C TAP42Q04372 366 aa9.88□□□□□ -0.83
SNP1YIL061C MTR4P47047 1073 aaKnown RBP9.87□□□□□ -0.83
SNP1YIL061C USO1P25386 1790 aa9.86□□□□□ -0.83
SNP1YIL061C VPS27P40343 622 aaKnown RBP9.85□□□□□ -0.83
SNP1YIL061C PRP43P53131 767 aaKnown RBP9.85□□□□□ -0.83
SNP1YIL061C ADE6P38972 1358 aaKnown RBP9.85□□□□□ -0.83
SNP1YIL061C PDI1P17967 522 aaKnown RBP9.84□□□□□ -0.83
SNP1YIL061C YCK3P39962 524 aa9.84□□□□□ -0.83
SNP1YIL061C CDC45Q08032 650 aa9.84□□□□□ -0.83
SNP1YIL061C YDL144CQ07589 356 aa9.83□□□□□ -0.84
SNP1YIL061C DIP2Q12220 943 aaPredicted RBP9.83□□□□□ -0.84
SNP1YIL061C AUS1Q08409 1394 aa9.83□□□□□ -0.84
SNP1YIL061C RRP46P53256 223 aaPredicted RBP9.82□□□□□ -0.84
SNP1YIL061C KAR2P16474 682 aaKnown RBP9.81□□□□□ -0.84
SNP1YIL061C GRX4P32642 244 aa9.81□□□□□ -0.84
SNP1YIL061C ISW2Q08773 1120 aa9.81□□□□□ -0.84
SNP1YIL061C RTF1P53064 558 aa9.8□□□□□ -0.84
SNP1YIL061C HIM1Q06674 414 aa9.79□□□□□ -0.84
SNP1YIL061C SNF2P22082 1703 aa9.79□□□□□ -0.84
SNP1YIL061C THI12P42883 340 aa9.78□□□□□ -0.84
SNP1YIL061C THI5P43534 340 aa9.78□□□□□ -0.84
SNP1YIL061C THI11P47183 340 aa9.78□□□□□ -0.84
SNP1YIL061C THI13Q07748 340 aa9.78□□□□□ -0.84
SNP1YIL061C RVB2Q12464 471 aaKnown RBP9.78□□□□□ -0.84
SNP1YIL061C YRB30P53107 440 aaPredicted RBP9.77□□□□□ -0.85
SNP1YIL061C HAA1Q12753 694 aaKnown RBP9.77□□□□□ -0.85
SNP1YIL061C RPS24AP0CX31 135 aaKnown RBP9.76□□□□□ -0.85
SNP1YIL061C RPS24BP0CX32 135 aaKnown RBP9.76□□□□□ -0.85
SNP1YIL061C SUI2P20459 304 aaKnown RBP9.76□□□□□ -0.85
SNP1YIL061C RTR1P40084 226 aaPredicted RBP9.76□□□□□ -0.85
SNP1YIL061C MPP10P47083 593 aaKnown RBP9.76□□□□□ -0.85
SNP1YIL061C CSE4P36012 229 aa9.75□□□□□ -0.85
SNP1YIL061C PRD1P25375 712 aa9.73□□□□□ -0.85
SNP1YIL061C RPO41P13433 1351 aaKnown RBP9.73□□□□□ -0.85
SNP1YIL061C PAP2P53632 584 aaKnown RBP9.72□□□□□ -0.85
SNP1YIL061C RPG1P38249 964 aaKnown RBP9.71□□□□□ -0.86
SNP1YIL061C THI22Q06490 572 aa9.71□□□□□ -0.86
SNP1YIL061C GAS4Q08271 471 aa9.71□□□□□ -0.86
SNP1YIL061C SAP155P43612 1002 aa9.7□□□□□ -0.86
SNP1YIL061C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
SNP1YIL061C DPS1P04802 557 aaKnown RBP9.69□□□□□ -0.86
SNP1YIL061C TY4B-HP0C2J7 1802 aa9.68□□□□□ -0.86
SNP1YIL061C TY4B-JP47024 1803 aa9.68□□□□□ -0.86
SNP1YIL061C HEF3P53978 1044 aaKnown RBP9.68□□□□□ -0.86
SNP1YIL061C TFA1P36100 482 aa9.67□□□□□ -0.86
SNP1YIL061C FUN12P39730 1002 aaKnown RBP9.67□□□□□ -0.86
SNP1YIL061C APC1P53886 1748 aa9.66□□□□□ -0.86
SNP1YIL061C TPD3P31383 635 aa9.66□□□□□ -0.86
SNP1YIL061C YRF1-4O13559 1382 aa9.65□□□□□ -0.86
SNP1YIL061C YRF1-2P40105 1681 aa9.64□□□□□ -0.87
SNP1YIL061C SIR4P11978 1358 aa9.64□□□□□ -0.87
SNP1YIL061C AKL1P38080 1108 aaKnown RBP9.64□□□□□ -0.87
SNP1YIL061C PTP3P40048 928 aa9.64□□□□□ -0.87
SNP1YIL061C RTT109Q07794 436 aa9.64□□□□□ -0.87
SNP1YIL061C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
SNP1YIL061C PRP5P21372 849 aaPredicted RBP9.62□□□□□ -0.87
SNP1YIL061C YIL177CP40434 1758 aa9.61□□□□□ -0.87
SNP1YIL061C YJL225CP40889 1758 aa9.61□□□□□ -0.87
SNP1YIL061C AVT3P36062 692 aa9.61□□□□□ -0.87
SNP1YIL061C DSD1P53095 428 aa9.61□□□□□ -0.87
SNP1YIL061C SLM3Q12093 417 aa9.61□□□□□ -0.87
SNP1YIL061C RRP5Q05022 1729 aaKnown RBP9.59□□□□□ -0.87
SNP1YIL061C RAD2P07276 1031 aa9.59□□□□□ -0.87
SNP1YIL061C YIL092WP40497 633 aa9.59□□□□□ -0.87
SNP1YIL061C YNL050CP53952 270 aa9.59□□□□□ -0.87
SNP1YIL061C PRP45P28004 379 aaPredicted RBP9.58□□□□□ -0.88
SNP1YIL061C NTH2P35172 780 aa9.58□□□□□ -0.88
SNP1YIL061C FPR3P38911 411 aaKnown RBP9.58□□□□□ -0.88
SNP1YIL061C BUD27P43573 796 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
SNP1YIL061C MSB3P48566 633 aaPredicted RBP9.57□□□□□ -0.88
SNP1YIL061C CTF4Q01454 927 aa9.56□□□□□ -0.88
SNP1YIL061C MAK21Q12176 1025 aaKnown RBP9.56□□□□□ -0.88
SNP1YIL061C MAM1P40065 302 aa9.55□□□□□ -0.88
SNP1YIL061C DAL5P15365 543 aa9.54□□□□□ -0.88
SNP1YIL061C GYP7P48365 746 aa9.54□□□□□ -0.88
SNP1YIL061C URB1P34241 1764 aaKnown RBP9.54□□□□□ -0.88
SNP1YIL061C FKS3Q04952 1785 aa9.53□□□□□ -0.88
SNP1YIL061C ZDS1P50111 915 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms