RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C RTG3P38165 486 aa10.04□□□□□ -0.8
SNP1YIL061C YML133CQ03099 1374 aa10.02□□□□□ -0.8
SNP1YIL061C YLL067CQ07888 1374 aa10.02□□□□□ -0.8
SNP1YIL061C YLL066CQ99208 1374 aa10.02□□□□□ -0.8
SNP1YIL061C RIA1P53893 1110 aa10.02□□□□□ -0.81
SNP1YIL061C PSK1P31374 1356 aa10.01□□□□□ -0.81
SNP1YIL061C IOC4Q04213 475 aa10□□□□□ -0.81
SNP1YIL061C MLP1Q02455 1875 aaKnown RBP10□□□□□ -0.81
SNP1YIL061C PRI1P10363 409 aa9.99□□□□□ -0.81
SNP1YIL061C YNR029CP53729 429 aaKnown RBP9.97□□□□□ -0.81
SNP1YIL061C RCM1P53972 490 aa9.97□□□□□ -0.81
SNP1YIL061C PPH3P32345 308 aa9.96□□□□□ -0.82
SNP1YIL061C NOP2P40991 618 aaKnown RBP9.96□□□□□ -0.82
SNP1YIL061C AAD16Q02895 342 aa9.96□□□□□ -0.82
SNP1YIL061C TY1B-NL2Q99337 1749 aaKnown RBP9.96□□□□□ -0.82
SNP1YIL061C YEF3P16521 1044 aaKnown RBP9.95□□□□□ -0.82
SNP1YIL061C CPS1P27614 576 aa9.93□□□□□ -0.82
SNP1YIL061C RPP0P05317 312 aaKnown RBP9.91□□□□□ -0.82
SNP1YIL061C TRK1P12685 1235 aa9.91□□□□□ -0.82
SNP1YIL061C LEU2P04173 364 aaPredicted RBP9.88□□□□□ -0.83
SNP1YIL061C YFR006WP43590 535 aa9.88□□□□□ -0.83
SNP1YIL061C YMR196WQ04336 1088 aa9.88□□□□□ -0.83
SNP1YIL061C TAP42Q04372 366 aa9.88□□□□□ -0.83
SNP1YIL061C MTR4P47047 1073 aaKnown RBP9.87□□□□□ -0.83
SNP1YIL061C USO1P25386 1790 aa9.86□□□□□ -0.83
SNP1YIL061C VPS27P40343 622 aaKnown RBP9.85□□□□□ -0.83
SNP1YIL061C PRP43P53131 767 aaKnown RBP9.85□□□□□ -0.83
SNP1YIL061C ADE6P38972 1358 aaKnown RBP9.85□□□□□ -0.83
SNP1YIL061C PDI1P17967 522 aaKnown RBP9.84□□□□□ -0.83
SNP1YIL061C YCK3P39962 524 aa9.84□□□□□ -0.83
SNP1YIL061C CDC45Q08032 650 aa9.84□□□□□ -0.83
SNP1YIL061C YDL144CQ07589 356 aa9.83□□□□□ -0.84
SNP1YIL061C DIP2Q12220 943 aaPredicted RBP9.83□□□□□ -0.84
SNP1YIL061C AUS1Q08409 1394 aa9.83□□□□□ -0.84
SNP1YIL061C RRP46P53256 223 aaPredicted RBP9.82□□□□□ -0.84
SNP1YIL061C KAR2P16474 682 aaKnown RBP9.81□□□□□ -0.84
SNP1YIL061C GRX4P32642 244 aa9.81□□□□□ -0.84
SNP1YIL061C ISW2Q08773 1120 aa9.81□□□□□ -0.84
SNP1YIL061C RTF1P53064 558 aa9.8□□□□□ -0.84
SNP1YIL061C HIM1Q06674 414 aa9.79□□□□□ -0.84
SNP1YIL061C SNF2P22082 1703 aa9.79□□□□□ -0.84
SNP1YIL061C THI12P42883 340 aa9.78□□□□□ -0.84
SNP1YIL061C THI5P43534 340 aa9.78□□□□□ -0.84
SNP1YIL061C THI11P47183 340 aa9.78□□□□□ -0.84
SNP1YIL061C THI13Q07748 340 aa9.78□□□□□ -0.84
SNP1YIL061C RVB2Q12464 471 aaKnown RBP9.78□□□□□ -0.84
SNP1YIL061C YRB30P53107 440 aaPredicted RBP9.77□□□□□ -0.85
SNP1YIL061C HAA1Q12753 694 aaKnown RBP9.77□□□□□ -0.85
SNP1YIL061C RPS24AP0CX31 135 aaKnown RBP9.76□□□□□ -0.85
SNP1YIL061C RPS24BP0CX32 135 aaKnown RBP9.76□□□□□ -0.85
SNP1YIL061C SUI2P20459 304 aaKnown RBP9.76□□□□□ -0.85
SNP1YIL061C RTR1P40084 226 aaPredicted RBP9.76□□□□□ -0.85
SNP1YIL061C MPP10P47083 593 aaKnown RBP9.76□□□□□ -0.85
SNP1YIL061C CSE4P36012 229 aa9.75□□□□□ -0.85
SNP1YIL061C PRD1P25375 712 aa9.73□□□□□ -0.85
SNP1YIL061C RPO41P13433 1351 aaKnown RBP9.73□□□□□ -0.85
SNP1YIL061C PAP2P53632 584 aaKnown RBP9.72□□□□□ -0.85
SNP1YIL061C RPG1P38249 964 aaKnown RBP9.71□□□□□ -0.86
SNP1YIL061C THI22Q06490 572 aa9.71□□□□□ -0.86
SNP1YIL061C GAS4Q08271 471 aa9.71□□□□□ -0.86
SNP1YIL061C SAP155P43612 1002 aa9.7□□□□□ -0.86
SNP1YIL061C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
SNP1YIL061C DPS1P04802 557 aaKnown RBP9.69□□□□□ -0.86
SNP1YIL061C TY4B-HP0C2J7 1802 aa9.68□□□□□ -0.86
SNP1YIL061C TY4B-JP47024 1803 aa9.68□□□□□ -0.86
SNP1YIL061C HEF3P53978 1044 aaKnown RBP9.68□□□□□ -0.86
SNP1YIL061C TFA1P36100 482 aa9.67□□□□□ -0.86
SNP1YIL061C FUN12P39730 1002 aaKnown RBP9.67□□□□□ -0.86
SNP1YIL061C APC1P53886 1748 aa9.66□□□□□ -0.86
SNP1YIL061C TPD3P31383 635 aa9.66□□□□□ -0.86
SNP1YIL061C YRF1-4O13559 1382 aa9.65□□□□□ -0.86
SNP1YIL061C YRF1-2P40105 1681 aa9.64□□□□□ -0.87
SNP1YIL061C SIR4P11978 1358 aa9.64□□□□□ -0.87
SNP1YIL061C AKL1P38080 1108 aaKnown RBP9.64□□□□□ -0.87
SNP1YIL061C PTP3P40048 928 aa9.64□□□□□ -0.87
SNP1YIL061C RTT109Q07794 436 aa9.64□□□□□ -0.87
SNP1YIL061C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
SNP1YIL061C PRP5P21372 849 aaPredicted RBP9.62□□□□□ -0.87
SNP1YIL061C YIL177CP40434 1758 aa9.61□□□□□ -0.87
SNP1YIL061C YJL225CP40889 1758 aa9.61□□□□□ -0.87
SNP1YIL061C AVT3P36062 692 aa9.61□□□□□ -0.87
SNP1YIL061C DSD1P53095 428 aa9.61□□□□□ -0.87
SNP1YIL061C SLM3Q12093 417 aa9.61□□□□□ -0.87
SNP1YIL061C RRP5Q05022 1729 aaKnown RBP9.59□□□□□ -0.87
SNP1YIL061C RAD2P07276 1031 aa9.59□□□□□ -0.87
SNP1YIL061C YIL092WP40497 633 aa9.59□□□□□ -0.87
SNP1YIL061C YNL050CP53952 270 aa9.59□□□□□ -0.87
SNP1YIL061C PRP45P28004 379 aaPredicted RBP9.58□□□□□ -0.88
SNP1YIL061C NTH2P35172 780 aa9.58□□□□□ -0.88
SNP1YIL061C FPR3P38911 411 aaKnown RBP9.58□□□□□ -0.88
SNP1YIL061C BUD27P43573 796 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
SNP1YIL061C MSB3P48566 633 aaPredicted RBP9.57□□□□□ -0.88
SNP1YIL061C CTF4Q01454 927 aa9.56□□□□□ -0.88
SNP1YIL061C MAK21Q12176 1025 aaKnown RBP9.56□□□□□ -0.88
SNP1YIL061C MAM1P40065 302 aa9.55□□□□□ -0.88
SNP1YIL061C DAL5P15365 543 aa9.54□□□□□ -0.88
SNP1YIL061C GYP7P48365 746 aa9.54□□□□□ -0.88
SNP1YIL061C URB1P34241 1764 aaKnown RBP9.54□□□□□ -0.88
SNP1YIL061C FKS3Q04952 1785 aa9.53□□□□□ -0.88
SNP1YIL061C ZDS1P50111 915 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms