RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	SEC2	P17065	759 aa		4.97	□□□□□ -1.61
URM1	YIL008W	NIS1	P53939	407 aa		4.97	□□□□□ -1.61
URM1	YIL008W	AIM7	Q12156	149 aa		4.97	□□□□□ -1.61
URM1	YIL008W	TY1A-DR4	O74302	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-H	P0C2I4	478 aa	Known RBP	4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-A	P0CX57	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-PR1	P0CX58	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-OR	P0CX59	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-PR2	P0CX60	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-DR5	P0CX65	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-ER2	P0CX66	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-GR3	P0CX67	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-LR1	P0CX68	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-MR2	P0CX69	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	KEX2	P13134	814 aa		4.96	□□□□□ -1.62
URM1	YIL008W	SIT4	P20604	311 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-JR2	P47099	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-DR1	Q03856	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-ML1	Q04706	440 aa	Known RBP	4.96	□□□□□ -1.62
URM1	YIL008W	ERF2	Q06551	359 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-BR	Q12217	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-NL2	Q12470	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	TY1A-GR2	Q12485	440 aa		4.96	□□□□□ -1.62
URM1	YIL008W	MRF1	P30775	413 aa	Predicted RBP	4.95	□□□□□ -1.62
URM1	YIL008W	RPN1	P38764	993 aa	Known RBP	4.95	□□□□□ -1.62
URM1	YIL008W	RTF1	P53064	558 aa		4.95	□□□□□ -1.62
URM1	YIL008W	YNL115C	P53925	644 aa		4.95	□□□□□ -1.62
URM1	YIL008W	FPK1	P53739	893 aa		4.94	□□□□□ -1.62
URM1	YIL008W	SPT16	P32558	1035 aa	Known RBP	4.93	□□□□□ -1.62
URM1	YIL008W	YMR196W	Q04336	1088 aa		4.93	□□□□□ -1.62
URM1	YIL008W	SDH2	P21801	266 aa		4.92	□□□□□ -1.62
URM1	YIL008W	PAT1	P25644	796 aa	Known RBP	4.92	□□□□□ -1.62
URM1	YIL008W	ERG12	P07277	443 aa		4.91	□□□□□ -1.62
URM1	YIL008W	RRN7	P40992	514 aa		4.91	□□□□□ -1.62
URM1	YIL008W	HST2	P53686	357 aa		4.91	□□□□□ -1.62
URM1	YIL008W	KIN1	P13185	1064 aa		4.9	□□□□□ -1.63
URM1	YIL008W	AMS1	P22855	1083 aa		4.9	□□□□□ -1.63
URM1	YIL008W	YEL077C	Q3E7X8	1277 aa		4.9	□□□□□ -1.63
URM1	YIL008W	RAS1	P01119	309 aa		4.89	□□□□□ -1.63
URM1	YIL008W	SLY41	P22215	453 aa		4.89	□□□□□ -1.63
URM1	YIL008W	GLN1	P32288	370 aa	Known RBP	4.89	□□□□□ -1.63
URM1	YIL008W	TUB4	P53378	473 aa		4.89	□□□□□ -1.63
URM1	YIL008W	AGE1	Q04412	482 aa		4.89	□□□□□ -1.63
URM1	YIL008W	MMP1	Q12372	583 aa		4.89	□□□□□ -1.63
URM1	YIL008W	SCJ1	P25303	377 aa		4.88	□□□□□ -1.63
URM1	YIL008W	CSN12	P47130	423 aa		4.87	□□□□□ -1.63
URM1	YIL008W	PAC1	P39946	494 aa	Known RBP	4.86	□□□□□ -1.63
URM1	YIL008W	PUS6	P53294	404 aa		4.86	□□□□□ -1.63
URM1	YIL008W	TYW1	Q08960	810 aa	Known RBP	4.86	□□□□□ -1.63
URM1	YIL008W	KTR1	P27810	393 aa	Known RBP	4.85	□□□□□ -1.63
URM1	YIL008W	ESS1	P22696	170 aa		4.84	□□□□□ -1.63
URM1	YIL008W	CST6	P40535	587 aa		4.84	□□□□□ -1.63
URM1	YIL008W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
URM1	YIL008W	MOD5	P07884	428 aa		4.83	□□□□□ -1.64
URM1	YIL008W	KXD1	P53158	218 aa		4.83	□□□□□ -1.64
URM1	YIL008W	TBF1	Q02457	562 aa		4.83	□□□□□ -1.64
URM1	YIL008W	LAM6	Q08001	693 aa		4.83	□□□□□ -1.64
URM1	YIL008W	TRM1	P15565	570 aa	Known RBP	4.82	□□□□□ -1.64
URM1	YIL008W	YJU3	P28321	313 aa		4.82	□□□□□ -1.64
URM1	YIL008W	BDP1	P46678	594 aa		4.82	□□□□□ -1.64
URM1	YIL008W	FRK1	Q03002	865 aa	Predicted RBP	4.82	□□□□□ -1.64
URM1	YIL008W	SSA2	P10592	639 aa	Known RBP	4.81	□□□□□ -1.64
URM1	YIL008W	LEO1	P38439	464 aa		4.81	□□□□□ -1.64
URM1	YIL008W	GUA1	P38625	525 aa	Known RBP	4.81	□□□□□ -1.64
URM1	YIL008W	RPA14	P50106	137 aa		4.81	□□□□□ -1.64
URM1	YIL008W	PKH3	Q03306	898 aa	Predicted RBP	4.81	□□□□□ -1.64
URM1	YIL008W	TPD3	P31383	635 aa		4.8	□□□□□ -1.64
URM1	YIL008W	RSC30	P38781	883 aa		4.8	□□□□□ -1.64
URM1	YIL008W	HXT10	P43581	546 aa		4.8	□□□□□ -1.64
URM1	YIL008W	YPR097W	Q06839	1073 aa		4.8	□□□□□ -1.64
URM1	YIL008W	YDL206W	Q12424	762 aa		4.8	□□□□□ -1.64
URM1	YIL008W	PDC1	P06169	563 aa	Known RBP	4.79	□□□□□ -1.64
URM1	YIL008W	ALR1	Q08269	859 aa		4.79	□□□□□ -1.64
URM1	YIL008W	ARG8	P18544	423 aa		4.78	□□□□□ -1.64
URM1	YIL008W	TRK1	P12685	1235 aa		4.77	□□□□□ -1.65
URM1	YIL008W	RRD1	P40454	393 aa	Known RBP	4.77	□□□□□ -1.65
URM1	YIL008W	HED1	Q03937	162 aa		4.77	□□□□□ -1.65
URM1	YIL008W	RAD59	Q12223	238 aa		4.77	□□□□□ -1.65
URM1	YIL008W	CLA4	P48562	842 aa		4.76	□□□□□ -1.65
URM1	YIL008W	HPC2	Q01448	625 aa		4.76	□□□□□ -1.65
URM1	YIL008W	YPL062W	Q02781	134 aa		4.76	□□□□□ -1.65
URM1	YIL008W	PUS5	Q06244	254 aa		4.76	□□□□□ -1.65
URM1	YIL008W	AIR1	P40507	360 aa	Known RBP	4.75	□□□□□ -1.65
URM1	YIL008W	CDC4	P07834	779 aa		4.74	□□□□□ -1.65
URM1	YIL008W	SYH1	Q02875	849 aa	Known RBP	4.73	□□□□□ -1.65
URM1	YIL008W	BRL1	P38770	471 aa		4.72	□□□□□ -1.65
URM1	YIL008W	KIP2	P28743	706 aa		4.71	□□□□□ -1.66
URM1	YIL008W	TFB3	Q03290	321 aa		4.71	□□□□□ -1.66
URM1	YIL008W	VAC17	P25591	423 aa		4.7	□□□□□ -1.66
URM1	YIL008W	IXR1	P33417	597 aa		4.7	□□□□□ -1.66
URM1	YIL008W	CSE4	P36012	229 aa		4.7	□□□□□ -1.66
URM1	YIL008W	MAK16	P10962	306 aa	Predicted RBP	4.69	□□□□□ -1.66
URM1	YIL008W	MET32	Q12041	191 aa		4.69	□□□□□ -1.66
URM1	YIL008W	PKC1	P24583	1151 aa		4.68	□□□□□ -1.66
URM1	YIL008W	AFT1	P22149	690 aa		4.67	□□□□□ -1.66
URM1	YIL008W	ASH1	P34233	588 aa		4.67	□□□□□ -1.66
URM1	YIL008W	YBL036C	P38197	257 aa		4.67	□□□□□ -1.66
URM1	YIL008W	FIG4	P42837	879 aa		4.67	□□□□□ -1.66
URM1	YIL008W	HST3	P53687	447 aa		4.67	□□□□□ -1.66
URM1	YIL008W	GCR2	Q01722	534 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms