RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W CYC8P14922 966 aa2.81□□□□□ -1.96
TRA1YHR099W VMA10P48836 114 aaKnown RBP2.81□□□□□ -1.96
TRA1YHR099W DPB3P27344 201 aa2.8□□□□□ -1.96
TRA1YHR099W ZUO1P32527 433 aaKnown RBP2.8□□□□□ -1.96
TRA1YHR099W ATG11Q12527 1178 aa2.8□□□□□ -1.96
TRA1YHR099W DPS1P04802 557 aaKnown RBP2.8□□□□□ -1.96
TRA1YHR099W TAN1P53072 289 aaPredicted RBP2.8□□□□□ -1.96
TRA1YHR099W BMS1Q08965 1183 aaKnown RBP2.8□□□□□ -1.96
TRA1YHR099W SMC4Q12267 1418 aa2.8□□□□□ -1.96
TRA1YHR099W NOP53Q12080 455 aaKnown RBP2.8□□□□□ -1.96
TRA1YHR099W TPD3P31383 635 aa2.8□□□□□ -1.96
TRA1YHR099W SUM1P46676 1062 aa2.8□□□□□ -1.96
TRA1YHR099W CDC37P06101 506 aaKnown RBP2.8□□□□□ -1.96
TRA1YHR099W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
TRA1YHR099W VHS3Q08438 674 aa2.8□□□□□ -1.96
TRA1YHR099W SPT6P23615 1451 aaKnown RBP2.8□□□□□ -1.96
TRA1YHR099W NOC3Q07896 663 aaPredicted RBP2.8□□□□□ -1.96
TRA1YHR099W ETT1Q08421 412 aaKnown RBP2.8□□□□□ -1.96
TRA1YHR099W SWR1Q05471 1514 aa2.8□□□□□ -1.96
TRA1YHR099W KAR3P17119 729 aa2.79□□□□□ -1.96
TRA1YHR099W ENV11P53246 860 aa2.79□□□□□ -1.96
TRA1YHR099W ZIP1P31111 875 aa2.79□□□□□ -1.96
TRA1YHR099W RPC37P36121 282 aa2.79□□□□□ -1.96
TRA1YHR099W RTT105P40063 208 aa2.79□□□□□ -1.96
TRA1YHR099W ARF3P40994 183 aaRIP-Chip data2.79□□□□□ -1.96not detected
TRA1YHR099W MEI5P32489 222 aa2.79□□□□□ -1.96
TRA1YHR099W LTV1P34078 463 aa2.79□□□□□ -1.96
TRA1YHR099W SSA1P10591 642 aaKnown RBP2.79□□□□□ -1.96
TRA1YHR099W BUD6P41697 788 aa2.79□□□□□ -1.96
TRA1YHR099W PUF6Q04373 656 aaKnown RBP2.79□□□□□ -1.96
TRA1YHR099W YML108WQ03759 105 aa2.79□□□□□ -1.96
TRA1YHR099W CDC3P32457 520 aaKnown RBP2.79□□□□□ -1.96
TRA1YHR099W SAS3P34218 831 aa2.79□□□□□ -1.96
TRA1YHR099W PEX14P53112 341 aa2.79□□□□□ -1.96
TRA1YHR099W OPY2Q06810 360 aa2.79□□□□□ -1.96
TRA1YHR099W BRE1Q07457 700 aaKnown RBP2.79□□□□□ -1.96
TRA1YHR099W SWI6P09959 803 aa2.78□□□□□ -1.96
TRA1YHR099W NUG1P40010 520 aaKnown RBP2.78□□□□□ -1.96
TRA1YHR099W RSA3Q05942 220 aaKnown RBP2.78□□□□□ -1.96
TRA1YHR099W UFD4P33202 1483 aa2.78□□□□□ -1.96
TRA1YHR099W MYO2P19524 1574 aaKnown RBP2.78□□□□□ -1.96
TRA1YHR099W RAD1P06777 1100 aa2.78□□□□□ -1.96
TRA1YHR099W SPN1Q06505 410 aaPredicted RBP2.78□□□□□ -1.96
TRA1YHR099W RAD2P07276 1031 aa2.78□□□□□ -1.96
TRA1YHR099W VPS72Q03388 795 aa2.78□□□□□ -1.96
TRA1YHR099W OSH2Q12451 1283 aa2.78□□□□□ -1.96
TRA1YHR099W PEP5P12868 1029 aa2.78□□□□□ -1.96
TRA1YHR099W BBC1P47068 1157 aa2.78□□□□□ -1.96
TRA1YHR099W NDL1Q06568 189 aa2.78□□□□□ -1.96
TRA1YHR099W VTC2P43585 828 aa2.78□□□□□ -1.96
TRA1YHR099W DSL1P53847 754 aa2.78□□□□□ -1.97
TRA1YHR099W YEL1P34225 687 aa2.77□□□□□ -1.97
TRA1YHR099W UGA2P38067 497 aa2.77□□□□□ -1.97
TRA1YHR099W CHZ1P40019 153 aaPredicted RBP2.77□□□□□ -1.97
TRA1YHR099W BUG1Q12191 341 aa2.77□□□□□ -1.97
TRA1YHR099W UBP1P25037 809 aa2.77□□□□□ -1.97
TRA1YHR099W YPR097WQ06839 1073 aa2.77□□□□□ -1.97
TRA1YHR099W RPP1BP10622 106 aaKnown RBP2.77□□□□□ -1.97
TRA1YHR099W PUS4P48567 403 aaKnown RBP2.77□□□□□ -1.97
TRA1YHR099W YMR124WP39523 943 aaKnown RBP2.77□□□□□ -1.97
TRA1YHR099W RBA50Q04418 439 aa2.77□□□□□ -1.97
TRA1YHR099W SGS1P35187 1447 aa2.77□□□□□ -1.97
TRA1YHR099W YKR018CP36114 725 aa2.77□□□□□ -1.97
TRA1YHR099W ARG8P18544 423 aa2.77□□□□□ -1.97
TRA1YHR099W SWC3P31376 625 aa2.77□□□□□ -1.97
TRA1YHR099W ISW2Q08773 1120 aa2.77□□□□□ -1.97
TRA1YHR099W VPS24P36095 224 aaKnown RBP2.77□□□□□ -1.97
TRA1YHR099W SPO19Q03029 223 aa2.77□□□□□ -1.97
TRA1YHR099W ENT2Q05785 613 aa2.77□□□□□ -1.97
TRA1YHR099W SSN2P38931 1420 aa2.77□□□□□ -1.97
TRA1YHR099W SMC2P38989 1170 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W UBP15P50101 1230 aa2.76□□□□□ -1.97
TRA1YHR099W TMA64Q04600 565 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W ATG17Q06410 417 aa2.76□□□□□ -1.97
TRA1YHR099W VPS21P36017 210 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W YAP5P40574 245 aa2.76□□□□□ -1.97
TRA1YHR099W YML133CQ03099 1374 aa2.76□□□□□ -1.97
TRA1YHR099W YLL067CQ07888 1374 aa2.76□□□□□ -1.97
TRA1YHR099W YLL066CQ99208 1374 aa2.76□□□□□ -1.97
TRA1YHR099W RRT14P40470 206 aa2.76□□□□□ -1.97
TRA1YHR099W DPB4Q04603 196 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W HCA4P20448 770 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W MIC60P36112 540 aa2.76□□□□□ -1.97
TRA1YHR099W POL4P25615 582 aa2.76□□□□□ -1.97
TRA1YHR099W OLA1P38219 394 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W YPP1P46951 817 aa2.76□□□□□ -1.97
TRA1YHR099W EIS1Q05050 843 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W MLP2P40457 1679 aa2.76□□□□□ -1.97
TRA1YHR099W SRB4P32569 687 aa2.76□□□□□ -1.97
TRA1YHR099W KAR2P16474 682 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W PRP4P20053 465 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W ECM5Q03214 1411 aa2.76□□□□□ -1.97
TRA1YHR099W CLN2P20438 545 aa2.76□□□□□ -1.97
TRA1YHR099W GGA2P38817 585 aaKnown RBP2.76□□□□□ -1.97
TRA1YHR099W PET100P38958 111 aa2.76□□□□□ -1.97
TRA1YHR099W MET10P39692 1035 aa2.76□□□□□ -1.97
TRA1YHR099W TFG1P41895 735 aaPredicted RBP2.76□□□□□ -1.97
TRA1YHR099W YJL049WP47048 450 aa2.76□□□□□ -1.97
TRA1YHR099W MRX1P40050 688 aa2.75□□□□□ -1.97
TRA1YHR099W UTP5Q04177 643 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms