RNA–Protein interactions for RNA: YHR083W

SAM35, Transcript of Component of the sorting and assembly machinery (SAM) complex, yeastyeast

Gene SAM35, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM35YHR083W PSK1P31374 1356 aa12.54□□□□□ -0.4
SAM35YHR083W RPP0P05317 312 aaKnown RBP12.51□□□□□ -0.41
SAM35YHR083W RTG3P38165 486 aa12.51□□□□□ -0.41
SAM35YHR083W PRS1P32895 427 aaKnown RBP12.5□□□□□ -0.41
SAM35YHR083W YMR196WQ04336 1088 aa12.46□□□□□ -0.41
SAM35YHR083W RCM1P53972 490 aa12.45□□□□□ -0.42
SAM35YHR083W MTR4P47047 1073 aaKnown RBP12.44□□□□□ -0.42
SAM35YHR083W YNR029CP53729 429 aaKnown RBP12.44□□□□□ -0.42
SAM35YHR083W PDI1P17967 522 aaKnown RBP12.43□□□□□ -0.42
SAM35YHR083W RTF1P53064 558 aa12.43□□□□□ -0.42
SAM35YHR083W LEU2P04173 364 aaPredicted RBP12.42□□□□□ -0.42
SAM35YHR083W CPS1P27614 576 aa12.42□□□□□ -0.42
SAM35YHR083W CDC45Q08032 650 aa12.42□□□□□ -0.42
SAM35YHR083W VPS27P40343 622 aaKnown RBP12.41□□□□□ -0.42
SAM35YHR083W TAP42Q04372 366 aa12.41□□□□□ -0.42
SAM35YHR083W GRX4P32642 244 aa12.4□□□□□ -0.42
SAM35YHR083W YML133CQ03099 1374 aa12.4□□□□□ -0.42
SAM35YHR083W YLL067CQ07888 1374 aa12.4□□□□□ -0.42
SAM35YHR083W YLL066CQ99208 1374 aa12.4□□□□□ -0.42
SAM35YHR083W KAR2P16474 682 aaKnown RBP12.39□□□□□ -0.43
SAM35YHR083W MIF2P35201 549 aa12.39□□□□□ -0.43
SAM35YHR083W YRB30P53107 440 aaPredicted RBP12.39□□□□□ -0.43
SAM35YHR083W NST1P53935 1240 aa12.39□□□□□ -0.43
SAM35YHR083W SNF2P22082 1703 aa12.37□□□□□ -0.43
SAM35YHR083W USO1P25386 1790 aa12.36□□□□□ -0.43
SAM35YHR083W PPH3P32345 308 aa12.36□□□□□ -0.43
SAM35YHR083W YDL144CQ07589 356 aa12.33□□□□□ -0.44
SAM35YHR083W YEF3P16521 1044 aaKnown RBP12.32□□□□□ -0.44
SAM35YHR083W ADE6P38972 1358 aaKnown RBP12.3□□□□□ -0.44
SAM35YHR083W TRK1P12685 1235 aa12.3□□□□□ -0.44
SAM35YHR083W TFA1P36100 482 aa12.28□□□□□ -0.44
SAM35YHR083W RTR1P40084 226 aaPredicted RBP12.28□□□□□ -0.44
SAM35YHR083W PRP43P53131 767 aaKnown RBP12.28□□□□□ -0.44
SAM35YHR083W PAP2P53632 584 aaKnown RBP12.27□□□□□ -0.45
SAM35YHR083W CSE4P36012 229 aa12.25□□□□□ -0.45
SAM35YHR083W FPR3P38911 411 aaKnown RBP12.25□□□□□ -0.45
SAM35YHR083W RPO41P13433 1351 aaKnown RBP12.25□□□□□ -0.45
SAM35YHR083W THI12P42883 340 aa12.21□□□□□ -0.45
SAM35YHR083W THI5P43534 340 aa12.21□□□□□ -0.45
SAM35YHR083W THI11P47183 340 aa12.21□□□□□ -0.45
SAM35YHR083W THI13Q07748 340 aa12.21□□□□□ -0.45
SAM35YHR083W RVB2Q12464 471 aaKnown RBP12.21□□□□□ -0.45
SAM35YHR083W AUS1Q08409 1394 aa12.2□□□□□ -0.46
SAM35YHR083W RPS24AP0CX31 135 aaKnown RBP12.19□□□□□ -0.46
SAM35YHR083W RPS24BP0CX32 135 aaKnown RBP12.19□□□□□ -0.46
SAM35YHR083W MPP10P47083 593 aaKnown RBP12.19□□□□□ -0.46
SAM35YHR083W DPS1P04802 557 aaKnown RBP12.18□□□□□ -0.46
SAM35YHR083W HIM1Q06674 414 aa12.18□□□□□ -0.46
SAM35YHR083W PRD1P25375 712 aa12.17□□□□□ -0.46
SAM35YHR083W BUD27P43573 796 aaKnown RBP RIP-Chip data12.16□□□□□ -0.46not detected
SAM35YHR083W YFR016CP43597 1233 aaKnown RBP12.16□□□□□ -0.46
SAM35YHR083W SUI2P20459 304 aaKnown RBP12.15□□□□□ -0.46
SAM35YHR083W RRP46P53256 223 aaPredicted RBP12.15□□□□□ -0.46
SAM35YHR083W NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.15□□□□□ -0.46not detected
SAM35YHR083W GAS4Q08271 471 aa12.14□□□□□ -0.47
SAM35YHR083W SIR4P11978 1358 aa12.14□□□□□ -0.47
SAM35YHR083W APC1P53886 1748 aa12.14□□□□□ -0.47
SAM35YHR083W TY4B-HP0C2J7 1802 aa12.14□□□□□ -0.47
SAM35YHR083W TY4B-JP47024 1803 aa12.14□□□□□ -0.47
SAM35YHR083W YRF1-2P40105 1681 aa12.13□□□□□ -0.47
SAM35YHR083W RAD2P07276 1031 aa12.13□□□□□ -0.47
SAM35YHR083W MAK21Q12176 1025 aaKnown RBP12.13□□□□□ -0.47
SAM35YHR083W SAP155P43612 1002 aa12.11□□□□□ -0.47
SAM35YHR083W YRF1-4O13559 1382 aa12.1□□□□□ -0.47
SAM35YHR083W TPD3P31383 635 aa12.09□□□□□ -0.47
SAM35YHR083W AKL1P38080 1108 aaKnown RBP12.09□□□□□ -0.47
SAM35YHR083W CTF4Q01454 927 aa12.08□□□□□ -0.48
SAM35YHR083W THI22Q06490 572 aa12.08□□□□□ -0.48
SAM35YHR083W PRP5P21372 849 aaPredicted RBP12.06□□□□□ -0.48
SAM35YHR083W MAM1P40065 302 aa12.05□□□□□ -0.48
SAM35YHR083W PRP45P28004 379 aaPredicted RBP12.04□□□□□ -0.48
SAM35YHR083W YNL050CP53952 270 aa12.04□□□□□ -0.48
SAM35YHR083W HEF3P53978 1044 aaKnown RBP12.04□□□□□ -0.48
SAM35YHR083W FKS3Q04952 1785 aa12.04□□□□□ -0.48
SAM35YHR083W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.03□□□□□ -0.48not detected
SAM35YHR083W DSD1P53095 428 aa12.03□□□□□ -0.48
SAM35YHR083W RRP5Q05022 1729 aaKnown RBP12.02□□□□□ -0.49
SAM35YHR083W EDE1P34216 1381 aa12.02□□□□□ -0.49
SAM35YHR083W PTP3P40048 928 aa12.01□□□□□ -0.49
SAM35YHR083W GYP7P48365 746 aa12.01□□□□□ -0.49
SAM35YHR083W ZDS1P50111 915 aaKnown RBP12.01□□□□□ -0.49
SAM35YHR083W AOS1Q06624 347 aa12.01□□□□□ -0.49
SAM35YHR083W RTT109Q07794 436 aa12.01□□□□□ -0.49
SAM35YHR083W SLM3Q12093 417 aa12.01□□□□□ -0.49
SAM35YHR083W FUN12P39730 1002 aaKnown RBP12□□□□□ -0.49
SAM35YHR083W TCB1Q12466 1186 aa11.99□□□□□ -0.49
SAM35YHR083W YIL092WP40497 633 aa11.98□□□□□ -0.49
SAM35YHR083W YFR006WP43590 535 aa11.98□□□□□ -0.49
SAM35YHR083W HSP104P31539 908 aaKnown RBP11.97□□□□□ -0.49
SAM35YHR083W NTH2P35172 780 aa11.96□□□□□ -0.49
SAM35YHR083W NSE3Q05541 303 aa11.96□□□□□ -0.49
SAM35YHR083W URB1P34241 1764 aaKnown RBP11.96□□□□□ -0.49
SAM35YHR083W DAL5P15365 543 aa11.95□□□□□ -0.5
SAM35YHR083W UGA3P26370 528 aa11.95□□□□□ -0.5
SAM35YHR083W LYS2P07702 1392 aa11.94□□□□□ -0.5
SAM35YHR083W RSF2P46974 1380 aa11.94□□□□□ -0.5
SAM35YHR083W MSB3P48566 633 aaPredicted RBP11.94□□□□□ -0.5
SAM35YHR083W YIL177CP40434 1758 aa11.94□□□□□ -0.5
SAM35YHR083W YJL225CP40889 1758 aa11.94□□□□□ -0.5
SAM35YHR083W RPC31P17890 251 aa11.92□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms